RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 ILF3Q12906 894 aaKnown RBP eCLIP7.83□□□□□ -1.16
CPNE3-209ENST00000620393 SP140Q13342 867 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 C1orf61Q13536 156 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 CLCA4Q14CN2 919 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 ELOCQ15369 112 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 TGFBIQ15582 683 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 PPP1R3AQ16821 1122 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 UAP1L1Q3KQV9 507 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 PRAMEF14Q5SWL7 426 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 UNC5DQ6UXZ4 953 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 PRR23BQ6ZRT6 265 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 RABEPKQ7Z6M1 372 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 TAF8Q7Z7C8 310 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 PDZD3Q86UT5 571 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 C10orf107Q8IVU9 208 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 SDR16C5Q8N3Y7 309 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 FBXO15Q8NCQ5 510 aaPredicted RBP7.83□□□□□ -1.16
CPNE3-209ENST00000620393 PHC3Q8NDX5 983 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 CKAP2Q8WWK9 683 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 CCDC126Q96EE4 140 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 HIST1H2AHQ96KK5 128 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 INSM2Q96T92 566 aaPredicted RBP7.83□□□□□ -1.16
CPNE3-209ENST00000620393 HIST1H2AJQ99878 128 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 H2AFJQ9BTM1 129 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 LRFN3Q9BTN0 628 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 WWP1Q9H0M0 922 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 OSGEPL1Q9H4B0 414 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 PRDM8Q9NQV8 689 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 OXSMQ9NWU1 459 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 SIRPGQ9P1W8 387 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 SPASTQ9UBP0 616 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 TBC1D29Q9UFV1 150 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 PDE10AQ9Y233 779 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 WDR37Q9Y2I8 494 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 OARD1Q9Y530 152 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 PCDHB3Q9Y5E6 796 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 SNX11Q9Y5W9 270 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 BPTFQ12830 3046 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 A6NCN8 305 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 NEMP2A6NFY4 417 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 OR5K4A6NMS3 321 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 PDZK1P1A8MUH7 402 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 ARHGEF33A8MVX0 844 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 UBXN8O00124 270 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 YY2O15391 372 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 FFAR2O15552 330 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 IPO13O94829 963 aaKnown RBP7.82□□□□□ -1.16
CPNE3-209ENST00000620393 EML2O95834 649 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 RPN2P04844 631 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 SLC35G4P0C7Q5 338 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 NEFHP12036 1026 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 IMPDH1P20839 514 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 CYP2A7P20853 494 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 HALP42357 657 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 AP1S2P56377 157 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 GUCY1A3Q02108 690 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 ASPHQ12797 758 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 PCLAFQ15004 111 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 RPE65Q16518 533 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 PHKG1Q16816 387 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 PFKFB4Q16877 469 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 LRRK1Q38SD2 2015 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 TUBB8Q3ZCM7 444 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 PRRT3Q5FWE3 981 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 SULT1C3Q6IMI6 304 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 TTC23LQ6PF05 361 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 IYDQ6PHW0 289 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 SLC23A3Q6PIS1 610 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 ZC3H14Q6PJT7 736 aaKnown RBP7.82□□□□□ -1.16
CPNE3-209ENST00000620393 SLC30A9Q6PML9 568 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 FRA10AC1Q70Z53 315 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 TAX1BP1Q86VP1 789 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 SLC22A9Q8IVM8 553 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 TRIM42Q8IWZ5 723 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 TBC1D21Q8IYX1 336 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 FBXO39Q8N4B4 442 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 PDPRQ8NCN5 879 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 FAM46DQ8NEK8 389 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 OR6Y1Q8NGX8 325 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 MAGEC3Q8TD91 643 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 DYDC1Q8WWB3 177 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 SREK1Q8WXA9 508 aaKnown RBP7.82□□□□□ -1.16
CPNE3-209ENST00000620393 ZNF75CPQ92670 426 aaPredicted RBP7.82□□□□□ -1.16
CPNE3-209ENST00000620393 RAD51AP1Q96B01 352 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 RMDN2Q96LZ7 410 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 MAGEB18Q96M61 343 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 CCDC138Q96M89 665 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 FERD3LQ96RJ6 166 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 PRRX2Q99811 253 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 MVB12BQ9H7P6 319 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 CAAP1Q9H8G2 361 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 MANSC1Q9H8J5 431 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 CAPN10Q9HC96 672 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 UTP6Q9NYH9 597 aaKnown RBP7.82□□□□□ -1.16
CPNE3-209ENST00000620393 NUDT4Q9NZJ9 180 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 CD274Q9NZQ7 290 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 SCHIP1Q9P0W5 487 aaPredicted RBP7.82□□□□□ -1.16
CPNE3-209ENST00000620393 TAAR2Q9P1P5 351 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 APOBEC3BQ9UH17 382 aaKnown RBP7.82□□□□□ -1.16
CPNE3-209ENST00000620393 PTBP2Q9UKA9 531 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms