RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 DNAJC6O75061 913 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 CREG1O75629 220 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 CLDN7O95471 211 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 ATP1A1P05023 1023 aaKnown RBP8.38□□□□□ -1.07
GPC6-202ENST00000617456 MMP2P08253 660 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 CCNYL3P0C7X3 344 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 ALDH3A1P30838 453 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 HMGCLP35914 325 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 CCL11P51671 97 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 PGDP52209 483 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 EPHA4P54764 986 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 COPS2P61201 443 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 B2MP61769 119 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 DSC2Q02487 901 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 CDK18Q07002 472 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 NIPAL4Q0D2K0 466 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 KIF5AQ12840 1032 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 MRPL49Q13405 166 aaKnown RBP8.38□□□□□ -1.07
GPC6-202ENST00000617456 LAPTM5Q13571 262 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 DNASE1L3Q13609 305 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 IHHQ14623 411 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 MESDQ14696 234 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 KIR2DS5Q14953 304 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 QPCTQ16769 361 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 EIF2S3LQ2VIR3 472 aaKnown RBP8.38□□□□□ -1.07
GPC6-202ENST00000617456 PRR30Q53SZ7 412 aaPredicted RBP8.38□□□□□ -1.07
GPC6-202ENST00000617456 CPZQ66K79 652 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 ARHGEF18Q6ZSZ5 1173 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 TMC3Q7Z5M5 1100 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 TMEM151BQ8IW70 566 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 RCOR2Q8IZ40 523 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.38□□□□□ -1.07
GPC6-202ENST00000617456 TRAM1L1Q8N609 369 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 CNTD1Q8N815 330 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 PRR7Q8TB68 274 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 CT55Q8WUE5 264 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 SGCDQ92629 289 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 MRRFQ96E11 262 aaKnown RBP8.38□□□□□ -1.07
GPC6-202ENST00000617456 C9orf72Q96LT7 481 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 TEKT5Q96M29 485 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 CHP1Q99653 195 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 UQCC2Q9BRT2 126 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 RIOK2Q9BVS4 552 aaKnown RBP8.38□□□□□ -1.07
GPC6-202ENST00000617456 PACSIN1Q9BY11 444 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 TRIM39Q9HCM9 518 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 TBCCD1Q9NVR7 557 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 CUEDC1Q9NWM3 386 aaPredicted RBP8.38□□□□□ -1.07
GPC6-202ENST00000617456 HACD3Q9P035 362 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 SCHIP1Q9P0W5 487 aaPredicted RBP8.38□□□□□ -1.07
GPC6-202ENST00000617456 CPNE7Q9UBL6 633 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 TBK1Q9UHD2 729 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 POLG2Q9UHN1 485 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 KCND3Q9UK17 655 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 CNOT6Q9ULM6 557 aaKnown RBP8.38□□□□□ -1.07
GPC6-202ENST00000617456 SRPK3Q9UPE1 567 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 TMA7Q9Y2S6 64 aaKnown RBP8.38□□□□□ -1.07
GPC6-202ENST00000617456 MAP4K5Q9Y4K4 846 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 CAPN7Q9Y6W3 813 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 SHANK1Q9Y566 2161 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 LOC285095A0A1B0GVY8 99 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 HACD1B0YJ81 288 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 KCNK1O00180 336 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 TOX3O15405 576 aaPredicted RBP8.37□□□□□ -1.07
GPC6-202ENST00000617456 VEGFDO43915 354 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 NUAK1O60285 661 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 SKAP2O75563 359 aaPredicted RBP8.37□□□□□ -1.07
GPC6-202ENST00000617456 SPAG6O75602 509 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 CLDN1O95832 211 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 EIF2S1P05198 315 aaKnown RBP8.37□□□□□ -1.07
GPC6-202ENST00000617456 S100A6P06703 90 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 UBL4AP11441 157 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 AMD1P17707 334 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 DCTP40126 519 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 CD86P42081 329 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 CDKN2BP42772 138 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 LEPRP48357 1165 aaKnown RBP8.37□□□□□ -1.07
GPC6-202ENST00000617456 RPS18P62269 152 aaKnown RBP8.37□□□□□ -1.07
GPC6-202ENST00000617456 PDE1BQ01064 536 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 ACTN3Q08043 901 aaPredicted RBP8.37□□□□□ -1.07
GPC6-202ENST00000617456 AP1B1Q10567 949 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 MSLNQ13421 630 aaPredicted RBP8.37□□□□□ -1.07
GPC6-202ENST00000617456 XRCC4Q13426 336 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 SEMA5AQ13591 1074 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 PRKD1Q15139 912 aaPredicted RBP8.37□□□□□ -1.07
GPC6-202ENST00000617456 NDUFA5Q16718 116 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 ERCC6LQ2NKX8 1250 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 TFDP3Q5H9I0 405 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 CRYBG3Q68DQ2 2970 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 WASH2PQ6VEQ5 465 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 MAMDC2Q7Z304 686 aaPredicted RBP8.37□□□□□ -1.07
GPC6-202ENST00000617456 LYSMD3Q7Z3D4 306 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 EXOC3L1Q86VI1 746 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 TRIM48Q8IWZ4 208 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 SRRM1Q8IYB3 904 aaKnown RBP8.37□□□□□ -1.07
GPC6-202ENST00000617456 KATNAL2Q8IYT4 538 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 SPARTQ8N0X7 666 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 CCDC89Q8N998 374 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 TNIP2Q8NFZ5 429 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 TFB1MQ8WVM0 346 aaKnown RBP8.37□□□□□ -1.07
GPC6-202ENST00000617456 ITPKCQ96DU7 683 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms