RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 BRCC3P46736 316 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 PNLIPRP1P54315 467 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 BEX3Q00994 111 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 SCRN3Q0VDG4 424 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 GRB14Q14449 540 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 ALG11Q2TAA5 492 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 TXNRD3NBQ6F5E7 133 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 OR6K2Q8NGY2 324 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 SEC14L1Q92503 715 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 EBPLQ9BY08 206 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 BHLHE41Q9C0J9 482 aaPredicted RBP10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 MMP27Q9H306 513 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 NECTIN3Q9NQS3 549 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 FBXW11Q9UKB1 542 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 NUP50Q9UKX7 468 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 HSPB11Q9Y547 144 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 ST14Q9Y5Y6 855 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 A0A1W2PP18 115 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 ISM1B1AKI9 464 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 TMEM233B4DJY2 109 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 GPR25O00155 361 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 SLC9A3R1O14745 358 aaPredicted RBP10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 FANCGO15287 622 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 PRODHO43272 600 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 NDST2P52849 883 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 FRRS1Q6ZNA5 592 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 BTN2A1Q7KYR7 527 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 CACUL1Q86Y37 369 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 BIRC7Q96CA5 298 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 SLC7A6OSQ96CW6 309 aaPredicted RBP10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 ZNF354BQ96LW1 612 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 BIRC8Q96P09 236 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 DUSP26Q9BV47 211 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 TTLL2Q9BWV7 592 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 TRIM2Q9C040 744 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 GOLGA2P5Q9HBQ8 144 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 EQTNQ9NQ60 294 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 FKBP14Q9NWM8 211 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 LRRIQ1Q96JM4 1722 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 TRAV19A0A0A6YYK7 116 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 RBM47A0AV96 593 aaKnown RBP10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 METTL21EPA6NDL7 271 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 IQCF5A8MTL0 148 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 MAGEB3O15480 346 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 CCNDBP1O95273 360 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 IL7RP16871 459 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 GNG2P59768 71 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 DEFA5Q01523 94 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 TARDBPQ13148 414 aaKnown RBP eCLIP10.48□□□□□ -0.733e-6■■■■□ 20.1
CLTCL1-209ENST00000617103 BTG3Q14201 252 aaPredicted RBP10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 MEP1AQ16819 746 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 MYLK3Q32MK0 819 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 NOMO2Q5JPE7 1267 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 LGI4Q8N135 537 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 SIDT2Q8NBJ9 832 aaKnown RBP10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 ING5Q8WYH8 240 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 PIGKQ92643 395 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 ZC3H10Q96K80 434 aaKnown RBP10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 COL21A1Q96P44 957 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 MGME1Q9BQP7 344 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 FAM105AQ9NUU6 356 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 POFUT2Q9Y2G5 429 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 PCDHGA11Q9Y5H2 935 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 NFAT5O94916 1531 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 OR6C75A6NL08 312 aa10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 CPSF4LA6NMK7 179 aaKnown RBP10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 XPNPEP2O43895 674 aa10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 VNN1O95497 513 aa10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 FPR1P21462 350 aa10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 S100GP29377 79 aa10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 MAGEA2P43356 314 aa10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 ZNF45Q02386 682 aa10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 ZNF234Q14588 700 aa10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 PCLAFQ15004 111 aa10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 TCEAL5Q5H9L2 206 aa10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 TMEM53Q6P2H8 277 aa10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 TAC4Q86UU9 113 aa10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 ZC3HC1Q86WB0 502 aaKnown RBP10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 CCDC28AQ8IWP9 274 aa10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 PHC2Q8IXK0 858 aa10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 ASCC1Q8N9N2 400 aaKnown RBP10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 RDH12Q96NR8 316 aa10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 NMUR1Q9HB89 426 aa10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 STOX2Q9P2F5 926 aaPredicted RBP10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 RNF6Q9Y252 685 aa10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 ATG13O75143 517 aa10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 DNAJB5O75953 348 aa10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 SIX3O95343 332 aaPredicted RBP10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 TFPTP0C1Z6 253 aa10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 CLCN4P51793 760 aa10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 DEFB128Q7Z7B8 93 aa10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 SLC51AQ86UW1 340 aa10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 KLHL6Q8WZ60 621 aa10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 HDAC2Q92769 488 aaKnown RBP10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 EXOSC8Q96B26 276 aaKnown RBP10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 CXorf40BQ96DE9 158 aa10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 PDZD7Q9H5P4 517 aa10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 RDH8Q9NYR8 311 aa10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 CALML5Q9NZT1 146 aa10.47□□□□□ -0.73
CLTCL1-209ENST00000617103 COL1A2P08123 1366 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms