RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 NINQ8N4C6 2090 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 TBC1D3BA6NDS4 549 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 SLC9A3R1O14745 358 aaPredicted RBP5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 PER2O15055 1255 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 TRBC1P01850 177 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 BCKDHAP12694 445 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 CAPGP40121 348 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 PAGE3Q5JUK9 113 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 HACD2Q6Y1H2 254 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 RNF111Q6ZNA4 994 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 BHLHA9Q7RTU4 235 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 RTN4RL1Q86UN2 441 aaPredicted RBP5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 TMEM173Q86WV6 379 aaPredicted RBP5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 C11orf65Q8NCR3 313 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 PNPT1Q8TCS8 783 aaKnown RBP5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 CSGALNACT1Q8TDX6 532 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 ZUFSPQ96AP4 578 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 TPD52L3Q96J77 140 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 UBAP1Q9NZ09 502 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 CNOT6Q9ULM6 557 aaKnown RBP5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 PAIP2BQ9ULR5 123 aaKnown RBP5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 ASB3Q9Y575 518 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 BACE2Q9Y5Z0 518 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 DOCK3Q8IZD9 2030 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 ARAP2Q8WZ64 1704 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 A0A1W2PQ67 120 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 DRGXA6NNA5 263 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 NADKO95544 446 aaPredicted RBP5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 ZBTB11O95625 1053 aaPredicted RBP5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 SNAP29O95721 258 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 PCSK2P16519 638 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 S100A5P33763 92 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 CBLBQ13191 982 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 RCAN2Q14206 197 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 Q6ZSR9 355 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 NUDT18Q6ZVK8 323 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 ADGRG5Q8IZF4 528 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 PROKR1Q8TCW9 393 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 TMBIM1Q969X1 311 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 CREBZFQ9NS37 354 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 AHSPQ9NZD4 102 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 DEC1Q9P2X7 70 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 RPS6KA6Q9UK32 745 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 SDK2Q58EX2 2172 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 C7orf72A4D263 438 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 C2orf78A6NCI8 922 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 IFRD1O00458 451 aaPredicted RBP5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 CXCR6O00574 342 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 PENKP01210 267 aaPredicted RBP5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 ALDOCP09972 364 aaKnown RBP5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 ELFN1P0C7U0 828 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 CYP2A6P11509 494 aaPredicted RBP5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 ALDH9A1P49189 494 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 TUBA4AP68366 448 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 CBX2Q14781 532 aaPredicted RBP5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 ACOX1Q15067 660 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 CPTPQ5TA50 214 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 GOLM1Q8NBJ4 401 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 CD200R1Q8TD46 325 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 SH3RF2Q8TEC5 729 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 L3HYPDHQ96EM0 354 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 FBXL20Q96IG2 436 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 ITCHQ96J02 903 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 CEP19Q96LK0 163 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 MAGEE1Q9HCI5 957 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 KRT84Q9NSB2 600 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 VAPAQ9P0L0 249 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 SLAMF8Q9P0V8 285 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 PDE10AQ9Y233 779 aa5.53□□□□□ -1.52
SYNCRIP-204ENST00000616122 RGS5O15539 181 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 PABPC1P11940 636 aaKnown RBP5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 MTHFRP42898 656 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 TRPC1P48995 793 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 ERVPABLB-1P60509 514 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 CYP4F8P98187 520 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 PWP1Q13610 501 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 MYLK3Q32MK0 819 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 PAGE2BQ5JRK9 111 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 GPRC6AQ5T6X5 926 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 PROSER1Q86XN7 944 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 MFSD6LQ8IWD5 586 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 SLC22A12Q96S37 553 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 BOCQ9BWV1 1114 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 REXO4Q9GZR2 422 aaKnown RBP5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 ATAD3AQ9NVI7 634 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 TRPC4Q9UBN4 977 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 SAMD4AQ9UPU9 718 aaKnown RBP5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 INSL5Q9Y5Q6 135 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 A0A1W2PQ45 241 aaPredicted RBP5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 A0A1W2PQY0 241 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 NEDD8-MDP1E9PL57 170 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 H0YJX3 145 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 TEX28O15482 410 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 SUV39H1O43463 412 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 CD1EP15812 388 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 PRPS1L1P21108 318 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 GPX3P22352 226 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 PRKACGP22612 351 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 CRATP43155 626 aa5.52□□□□□ -1.53
SYNCRIP-204ENST00000616122 ATP4BP51164 291 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms