RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 PTPN5P54829 565 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 SPIDRQ14159 915 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 TRIM71Q2Q1W2 868 aaKnown RBP6.25□□□□□ -1.41
SNX13-213ENST00000611725 RFTN2Q52LD8 501 aaPredicted RBP6.25□□□□□ -1.41
SNX13-213ENST00000611725 SERPINA13PQ6UXR4 307 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 CACUL1Q86Y37 369 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 RAB42Q8N4Z0 105 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 PNPT1Q8TCS8 783 aaKnown RBP6.25□□□□□ -1.41
SNX13-213ENST00000611725 LINC01599Q8WXQ3 324 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 BOCQ9BWV1 1114 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 RAD21L1Q9H4I0 556 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 AASDHPPTQ9NRN7 309 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 PCDHGA11Q9Y5H2 935 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 ADAMTSL1Q8N6G6 1762 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 EFCAB14O75071 495 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 ZNF26P17031 533 aaPredicted RBP6.25□□□□□ -1.41
SNX13-213ENST00000611725 ST13P50502 369 aaKnown RBP6.25□□□□□ -1.41
SNX13-213ENST00000611725 ARSFP54793 590 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 TXNL4AP83876 142 aaKnown RBP6.25□□□□□ -1.41
SNX13-213ENST00000611725 MYLK3Q32MK0 819 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 CARD16Q5EG05 197 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 PAGE3Q5JUK9 113 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 NCEH1Q6PIU2 408 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 RSPO2Q6UXX9 243 aaPredicted RBP6.25□□□□□ -1.41
SNX13-213ENST00000611725 BBS7Q8IWZ6 715 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 ADGRG2Q8IZP9 1017 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 PELI3Q8N2H9 469 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 DNAJB8Q8NHS0 232 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 UTP15Q8TED0 518 aaKnown RBP6.25□□□□□ -1.41
SNX13-213ENST00000611725 AURKBQ96GD4 344 aaPredicted RBP6.25□□□□□ -1.41
SNX13-213ENST00000611725 MAGEB10Q96LZ2 347 aaPredicted RBP6.25□□□□□ -1.41
SNX13-213ENST00000611725 RNF38Q9H0F5 515 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 SLC32A1Q9H598 525 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 PCDH12Q9NPG4 1184 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 UBAP1Q9NZ09 502 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 AHSPQ9NZD4 102 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 CD84Q9UIB8 345 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 DFNA5O60443 496 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 RSL1D1O76021 490 aaKnown RBP6.25□□□□□ -1.41
SNX13-213ENST00000611725 C8GP07360 202 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 BCKDHAP12694 445 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 CR2P20023 1033 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 AQP1P29972 269 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 HNF1BP35680 557 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 NEK2P51955 445 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 ERVPABLB-1P60509 514 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 ABHD18Q0P651 414 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 GPRC6AQ5T6X5 926 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 CPTPQ5TA50 214 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 ERICH5Q6P6B1 374 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 ATG14Q6ZNE5 492 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 RRM2BQ7LG56 351 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 CHERPQ8IWX8 916 aaKnown RBP6.25□□□□□ -1.41
SNX13-213ENST00000611725 KIAA2013Q8IYS2 634 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 UBE2E3Q969T4 207 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 TMBIM1Q969X1 311 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 ARMC1Q9NVT9 282 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 MARCH5Q9NX47 278 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 ATXN10Q9UBB4 475 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 RNF11Q9Y3C5 154 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 SDK1Q7Z5N4 2213 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 UBFD1O14562 309 aaKnown RBP6.25□□□□□ -1.41
SNX13-213ENST00000611725 CCNA2P20248 432 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 MTHFRP42898 656 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 PCBP2Q15366 365 aaKnown RBP eCLIP6.25□□□□□ -1.412e-9■■■■■ 41
SNX13-213ENST00000611725 CAPN13Q6MZZ7 669 aaPredicted RBP6.25□□□□□ -1.41
SNX13-213ENST00000611725 UGT2A3Q6UWM9 527 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 ADCK1Q86TW2 530 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 PLD3Q8IV08 490 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 NAT16Q8N8M0 369 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 ZFP28Q8NHY6 868 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 PROKR1Q8TCW9 393 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 SCRN2Q96FV2 425 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 ACAT2Q9BWD1 397 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 SMOXQ9NWM0 555 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 TCRBV3S1A0A5B6 114 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 PDZK1P1A8MUH7 402 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 LATS1O95835 1130 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 NPPAP01160 153 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 C8BP07358 591 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 STK19P49842 368 aaPredicted RBP6.25□□□□□ -1.41
SNX13-213ENST00000611725 ADARP55265 1226 aaKnown RBP6.25□□□□□ -1.41
SNX13-213ENST00000611725 SRSF11Q05519 484 aaKnown RBP6.25□□□□□ -1.41
SNX13-213ENST00000611725 MRPL58Q14197 206 aaKnown RBP6.25□□□□□ -1.41
SNX13-213ENST00000611725 TRIM16LQ309B1 348 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 TAS1R1Q7RTX1 841 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 ADGRG5Q8IZF4 528 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 TMEM102Q8N9M5 508 aaPredicted RBP6.25□□□□□ -1.41
SNX13-213ENST00000611725 PHC3Q8NDX5 983 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 NELL1Q92832 810 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 LRCH3Q96II8 777 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 ZNF597Q96LX8 424 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 TMEM106CQ9BVX2 250 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 EPS8L2Q9H6S3 715 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 PLGRKTQ9HBL7 147 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 TNFRSF12AQ9NP84 129 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 GALNT8Q9NY28 637 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 TMEM181Q9P2C4 612 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 IFT80Q9P2H3 777 aaPredicted RBP6.25□□□□□ -1.41
SNX13-213ENST00000611725 DEC1Q9P2X7 70 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms