RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 CACNG1Q06432 222 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 ACOX1Q15067 660 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 PDE12Q6L8Q7 609 aaKnown RBP14.39□□□□□ -0.11
VPS36-207ENST00000611132 MSANTD2Q6P1R3 559 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 TCAIMQ8N3R3 496 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 C9orf43Q8TAL5 461 aaPredicted RBP14.39□□□□□ -0.11
VPS36-207ENST00000611132 UROC1Q96N76 676 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 OSBPL10Q9BXB5 764 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 DERL2Q9GZP9 239 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 SNTG1Q9NSN8 517 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 CMTM6Q9NX76 183 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 DNMT3LQ9UJW3 386 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 FADS2P1A8MWK0 482 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 SGTAO43765 313 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 KPNA6O60684 536 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 STX11O75558 287 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 MMP3P08254 477 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 ALDH3B2P48448 385 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 ELAVL2Q12926 359 aaKnown RBP14.38□□□□□ -0.11
VPS36-207ENST00000611132 SLC36A3Q495N2 470 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 DDX53Q86TM3 631 aaKnown RBP14.38□□□□□ -0.11
VPS36-207ENST00000611132 OR4A15Q8NGL6 344 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 C8orf48Q96LL4 319 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 TSGA13Q96PP4 275 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 TEFMQ96QE5 360 aaKnown RBP14.38□□□□□ -0.11
VPS36-207ENST00000611132 AIG1Q9NVV5 245 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 RNF11Q9Y3C5 154 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 KCTD3Q9Y597 815 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 PCDHB7Q9Y5E2 793 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 PCDHGC4Q9Y5F7 938 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 NOS1APO75052 506 aaPredicted RBP14.38□□□□□ -0.11
VPS36-207ENST00000611132 ANXA8P13928 327 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 EPORP19235 508 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 SDC2P34741 201 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 MADCAM1Q13477 382 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 DENND1CQ8IV53 801 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 ADGRG5Q8IZF4 528 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 OR10Q1Q8NGQ4 319 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 SCAMP5Q8TAC9 235 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 TCF25Q9BQ70 676 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 C2orf49Q9BVC5 232 aaPredicted RBP14.38□□□□□ -0.11
VPS36-207ENST00000611132 PTGFRNQ9P2B2 879 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 ERVK-18Q9QC07 812 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 ALS2Q96Q42 1657 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 LRP5O75197 1615 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 FABP12A6NFH5 140 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 FFAR2O15552 330 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 PSIP1O75475 530 aaKnown RBP14.38□□□□□ -0.11
VPS36-207ENST00000611132 EEDO75530 441 aaKnown RBP14.38□□□□□ -0.11
VPS36-207ENST00000611132 ALDH2P05091 517 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 GSTT2P0CG29 244 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 GSTT2BP0CG30 244 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 PTX3P26022 381 aaPredicted RBP14.38□□□□□ -0.11
VPS36-207ENST00000611132 MAP2K4P45985 399 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 ACLYP53396 1101 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 APOFQ13790 326 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 ANKRD26P1Q6NSI1 321 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 OSTM1Q86WC4 334 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 UBE2J2Q8N2K1 259 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 ZBTB2Q8N680 514 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 OR8H1Q8NGG4 311 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 SLC22A4Q9H015 551 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 PRDM5Q9NQX1 630 aaPredicted RBP14.38□□□□□ -0.11
VPS36-207ENST00000611132 VPS51Q9UID3 782 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 SLC1A7O00341 560 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 CCNDBP1O95273 360 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 PPP5CP53041 499 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 ANGPT1Q15389 498 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 CCDC59Q9P031 241 aaKnown RBP14.38□□□□□ -0.11
VPS36-207ENST00000611132 B3GNT3Q9Y2A9 372 aa14.38□□□□□ -0.11
VPS36-207ENST00000611132 MRPS7Q9Y2R9 242 aaKnown RBP14.38□□□□□ -0.11
VPS36-207ENST00000611132 A0A1W2PQ72 361 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 ANKDD1BA6NHY2 528 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 STX16O14662 325 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 JUNP05412 331 aaKnown RBP14.37□□□□□ -0.11
VPS36-207ENST00000611132 POU2F1P14859 743 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 FEN1P39748 380 aaKnown RBP14.37□□□□□ -0.11
VPS36-207ENST00000611132 MAGEA3P43357 314 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 RPIAP49247 311 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 SLC13A2Q13183 592 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 TUBB3Q13509 450 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 TAF1AQ15573 450 aaPredicted RBP14.37□□□□□ -0.11
VPS36-207ENST00000611132 GPR162Q16538 588 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 ZNF181Q2M3W8 571 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 SPANXN4Q5MJ08 99 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 CLIP4Q8N3C7 705 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 OLIG1Q8TAK6 271 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 EFHD2Q96C19 240 aaPredicted RBP14.37□□□□□ -0.11
VPS36-207ENST00000611132 SLC38A2Q96QD8 506 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 KCTD5Q9NXV2 234 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 KPNA5O15131 536 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 RFPL2O75678 378 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 OXSR1O95747 527 aaPredicted RBP14.37□□□□□ -0.11
VPS36-207ENST00000611132 C9P02748 559 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 ATXN8OSP0DMR3 200 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 ITPKAP23677 461 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 PTPN5P54829 565 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 ABHD18Q0P651 414 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 IL18Q14116 193 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 LAPTM4AQ15012 233 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms