RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 SCAPQ12770 1279 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 TGFBIQ15582 683 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 KCTD11Q693B1 232 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 PRR23BQ6ZRT6 265 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 RRM2BQ7LG56 351 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 LYSMD3Q7Z3D4 306 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 TRAPPC5Q8IUR0 188 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 ZDHHC21Q8IVQ6 265 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 KRTCAP2Q8N6L1 136 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 PIK3C3Q8NEB9 887 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 FEM1CQ96JP0 617 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 RANBP9Q96S59 729 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 MTERF1Q99551 399 aaKnown RBP10.18□□□□□ -0.78
CTCFL-216ENST00000608263 CEP44Q9C0F1 390 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 TLR6Q9Y2C9 796 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 INSL6Q9Y581 213 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 SHROOM3Q8TF72 1996 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 ZDBF2Q9HCK1 2354 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 FAM234BA2RU67 622 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 ACSL4O60488 711 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 NDUFS2O75306 463 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 STK16O75716 305 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 PGLSO95336 258 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 IGSF6O95976 241 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 PGFP49763 221 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 FAM189BP81408 668 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 KCNAB2Q13303 367 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 COL9A2Q14055 689 aaPredicted RBP10.18□□□□□ -0.78
CTCFL-216ENST00000608263 UPP1Q16831 310 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 GTDC1Q4AE62 458 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 C2orf27AQ580R0 203 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 MBOAT1Q6ZNC8 495 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 PIWIL3Q7Z3Z3 882 aaKnown RBP10.18□□□□□ -0.78
CTCFL-216ENST00000608263 SERINC5Q86VE9 423 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 STK40Q8N2I9 435 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 CNIH3Q8TBE1 160 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 C1QTNF1Q9BXJ1 281 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 UBFD1O14562 309 aaKnown RBP10.18□□□□□ -0.78
CTCFL-216ENST00000608263 ACOT8O14734 319 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 TFECO14948 347 aaPredicted RBP10.18□□□□□ -0.78
CTCFL-216ENST00000608263 CHRNA1P02708 482 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 RPIAP49247 311 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 NUDT6P53370 316 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 TTC3P53804 2025 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 DEFA1P59665 94 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 DEFA3P59666 94 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 OTUD1Q5VV17 481 aaPredicted RBP10.18□□□□□ -0.78
CTCFL-216ENST00000608263 PM20D1Q6GTS8 502 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 RNF19BQ6ZMZ0 732 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.18□□□□□ -0.783e-11■■■■■ 115.3
CTCFL-216ENST00000608263 UBE2R2Q712K3 238 aaPredicted RBP10.18□□□□□ -0.78
CTCFL-216ENST00000608263 DNAJB7Q7Z6W7 309 aaPredicted RBP10.18□□□□□ -0.78
CTCFL-216ENST00000608263 CENPSQ8N2Z9 138 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 GAB3Q8WWW8 586 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 KIAA1191Q96A73 305 aa10.18□□□□□ -0.78
CTCFL-216ENST00000608263 CLDN25C9JDP6 229 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 K7EPI3 171 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 KPNA5O15131 536 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 TBX1O43435 398 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 ATE1O95260 518 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 OPN1SWP03999 348 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 UMPSP11172 480 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 RFX3P48380 749 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 ARCN1P48444 511 aaKnown RBP10.17□□□□□ -0.78
CTCFL-216ENST00000608263 MED22Q15528 200 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 XKR6Q5GH73 641 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 MAMDC4Q6UXC1 1216 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 ABHD8Q96I13 439 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 NUAK2Q9H093 628 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 RPF2Q9H7B2 306 aaKnown RBP10.17□□□□□ -0.78
CTCFL-216ENST00000608263 MARCH7Q9H992 704 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 INTS10Q9NVR2 710 aaKnown RBP10.17□□□□□ -0.78
CTCFL-216ENST00000608263 HCSTQ9UBK5 93 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 RAPGEFL1Q9UHV5 662 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 TESMINQ9Y4I5 508 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 OR2AG2A6NM03 316 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 TMX2-CTNND1H3BSU7 103 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 EFCAB14O75071 495 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 UGT2B4P06133 528 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 GSTM1P09488 218 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 MAPK1P28482 360 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 VBP1P61758 197 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 SULT1C3Q6IMI6 304 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 FBXO46Q6PJ61 603 aaPredicted RBP10.17□□□□□ -0.78
CTCFL-216ENST00000608263 SCD5Q86SK9 330 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 RBM4BQ9BQ04 359 aaKnown RBP10.17□□□□□ -0.78
CTCFL-216ENST00000608263 RBM4Q9BWF3 364 aaKnown RBP10.17□□□□□ -0.78
CTCFL-216ENST00000608263 GPR62Q9BZJ7 368 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 GNPTGQ9UJJ9 305 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 LOC730098B7Z3J9 87 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 CYBAP13498 195 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 AZGP1P25311 298 aaKnown RBP10.17□□□□□ -0.78
CTCFL-216ENST00000608263 RFC2P35250 354 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 ACADVLP49748 655 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 TPTEP56180 551 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 RPL26P61254 145 aaKnown RBP10.17□□□□□ -0.78
CTCFL-216ENST00000608263 PDE12Q6L8Q7 609 aaKnown RBP10.17□□□□□ -0.78
CTCFL-216ENST00000608263 BLOC1S3Q6QNY0 202 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 ENPP6Q6UWR7 440 aa10.17□□□□□ -0.78
CTCFL-216ENST00000608263 LARP4Q71RC2 724 aaKnown RBP eCLIP10.17□□□□□ -0.781e-7■■□□□ 12.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms