RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 CCDC78A2IDD5 438 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 CCDC162PA2VCL2 907 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 CLEC18AA5D8T8 446 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 OR51F1A6NGY5 319 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 BHMG1C9JSJ3 638 aaPredicted RBP7.38□□□□□ -1.23
CUX1-219ENST00000606749 LIN7AO14910 233 aaPredicted RBP7.38□□□□□ -1.23
CUX1-219ENST00000606749 MAP3K7O43318 606 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 CAPN1P07384 714 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 TPBGLP0DKB5 382 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 SPTBP11277 2137 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 PVRP15151 417 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 CYP2A7P20853 494 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 MSNP26038 577 aaKnown RBP7.38□□□□□ -1.23
CUX1-219ENST00000606749 ACADLP28330 430 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 NSG1P42857 185 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 CD97P48960 835 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 LMAN1P49257 510 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 MLLT10P55197 1068 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 SRSF1Q07955 248 aaKnown RBP eCLIP7.38□□□□□ -1.23
CUX1-219ENST00000606749 ITIH4Q14624 930 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 BRD3Q15059 726 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 CCDC38Q502W7 563 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 FAM69BQ5VUD6 431 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 CPZQ66K79 652 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 CLEC18BQ6UXF7 455 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 PACS1Q6VY07 963 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 NAPRTQ6XQN6 538 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 UNC5AQ6ZN44 842 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 CDHR3Q6ZTQ4 885 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 LINC00523Q86TU6 105 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 GAS2L3Q86XJ1 694 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 TBC1D21Q8IYX1 336 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 ENDOVQ8N8Q3 282 aaKnown RBP7.38□□□□□ -1.23
CUX1-219ENST00000606749 CLEC18CQ8NCF0 446 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 OR52K1Q8NGK4 314 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 OR5AR1Q8NGP9 310 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 ADAMTS17Q8TE56 1095 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 HDAC10Q969S8 669 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 CLIP3Q96DZ5 547 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 HES6Q96HZ4 224 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 ALS2CR12Q96Q35 445 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 OR2A14Q96R47 310 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 HGH1Q9BTY7 390 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 SLC25A23Q9BV35 468 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 KLHL25Q9H0H3 589 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 ACTR5Q9H9F9 607 aaPredicted RBP7.38□□□□□ -1.23
CUX1-219ENST00000606749 FANCEQ9HB96 536 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 ETNK1Q9HBU6 452 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 ACSS2Q9NR19 701 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 PCMTD2Q9NV79 361 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 TCFL5Q9UL49 500 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 ICKQ9UPZ9 632 aa7.38□□□□□ -1.23
CUX1-219ENST00000606749 SLC5A10A0PJK1 596 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 ARGFXA6NJG6 315 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 ERI2A8K979 691 aaKnown RBP7.37□□□□□ -1.23
CUX1-219ENST00000606749 E7EQ34 232 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 H3BMH7 237 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 QSOX1O00391 747 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 ZNF749O43361 778 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 HCRTR1O43613 425 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 OR1I1O60431 355 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 SUN1O94901 812 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 FTH1P02794 183 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 UGT2B7P16662 529 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 ADRA1DP25100 572 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 FOXN2P32314 431 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 GRIA1P42261 906 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 PTGIRP43119 386 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 ITGA1P56199 1179 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 CHAF1BQ13112 559 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 OASLQ15646 514 aaKnown RBP7.37□□□□□ -1.23
CUX1-219ENST00000606749 ZIC1Q15915 447 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 PTCHD3Q3KNS1 767 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 LYPLAL1Q5VWZ2 237 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 PAPD7Q5XG87 772 aaKnown RBP7.37□□□□□ -1.23
CUX1-219ENST00000606749 SPESP1Q6UW49 350 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 FAM198BQ6UWH4 519 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 SYTL1Q8IYJ3 562 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 TXLNBQ8N3L3 684 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 DNAAF3Q8N9W5 541 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 OR13J1Q8NGT2 312 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 OR5K2Q8NHB8 316 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 FLVCR1-AS1Q8TAF5 88 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 ATG4AQ8WYN0 398 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 ELMO1Q92556 727 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 TCTN2Q96GX1 697 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 ZNF778Q96MU6 729 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 DPH2Q9BQC3 489 aaPredicted RBP7.37□□□□□ -1.23
CUX1-219ENST00000606749 DESI2Q9BSY9 194 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 SLC7A5P2Q9GIP4 190 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 SPRTNQ9H040 489 aaPredicted RBP7.37□□□□□ -1.23
CUX1-219ENST00000606749 FAM60AQ9NP50 221 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 SPHK1Q9NYA1 384 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 ANKMY1Q9P2S6 941 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 SLC2A6Q9UGQ3 507 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 POLG2Q9UHN1 485 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 SNX7Q9UNH6 387 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 ASF1AQ9Y294 204 aa7.37□□□□□ -1.23
CUX1-219ENST00000606749 PCDHGA9Q9Y5G4 932 aaKnown RBP7.37□□□□□ -1.23
CUX1-219ENST00000606749 UBR5O95071 2799 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms