RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 CLCNKAP51800 687 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 UNC50Q53HI1 259 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 TTC23LQ6PF05 361 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 MAML2Q8IZL2 1156 aaPredicted RBP22.04■■□□□ 1.12
IRF3-228ENST00000601291 FBXL6Q8N531 539 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 DNASE2BQ8WZ79 361 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 RHBDF1Q96CC6 855 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 C20orf27Q9GZN8 174 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 WWP1Q9H0M0 922 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 ZNF395Q9H8N7 513 aaPredicted RBP22.04■■□□□ 1.12
IRF3-228ENST00000601291 TM9SF3Q9HD45 589 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 ACSS2Q9NR19 701 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 PTBP2Q9UKA9 531 aaKnown RBP22.04■■□□□ 1.12
IRF3-228ENST00000601291 ASF1AQ9Y294 204 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 PLEKHM1Q9Y4G2 1056 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 A0A1W2PR77 199 aa22.03■■□□□ 1.12
IRF3-228ENST00000601291 PRR19A6NJB7 356 aa22.03■■□□□ 1.12
IRF3-228ENST00000601291 SCAMP1O15126 338 aa22.03■■□□□ 1.12
IRF3-228ENST00000601291 C1orf105O95561 183 aa22.03■■□□□ 1.12
IRF3-228ENST00000601291 RPS17P08708 135 aaKnown RBP22.03■■□□□ 1.12
IRF3-228ENST00000601291 BLKP51451 505 aa22.03■■□□□ 1.12
IRF3-228ENST00000601291 FZD2Q14332 565 aa22.03■■□□□ 1.12
IRF3-228ENST00000601291 PCBP2Q15366 365 aaKnown RBP eCLIP22.03■■□□□ 1.123e-7■■■■■ 29.6
IRF3-228ENST00000601291 ARL13AQ5H913 290 aaPredicted RBP22.03■■□□□ 1.12
IRF3-228ENST00000601291 EEF1AKMT2Q5JPI9 291 aaKnown RBP22.03■■□□□ 1.12
IRF3-228ENST00000601291 ARMCX6Q7L4S7 300 aa22.03■■□□□ 1.12
IRF3-228ENST00000601291 UBTD2Q8WUN7 234 aa22.03■■□□□ 1.12
IRF3-228ENST00000601291 GAB3Q8WWW8 586 aa22.03■■□□□ 1.12
IRF3-228ENST00000601291 CCDC138Q96M89 665 aa22.03■■□□□ 1.12
IRF3-228ENST00000601291 ZDHHC5Q9C0B5 715 aa22.03■■□□□ 1.12
IRF3-228ENST00000601291 GSTO2Q9H4Y5 243 aa22.03■■□□□ 1.12
IRF3-228ENST00000601291 EML5Q05BV3 1969 aa22.02■■□□□ 1.12
IRF3-228ENST00000601291 PDZK1P1A8MUH7 402 aa22.02■■□□□ 1.12
IRF3-228ENST00000601291 TGDSO95455 350 aa22.02■■□□□ 1.12
IRF3-228ENST00000601291 RPL10P27635 214 aaKnown RBP22.02■■□□□ 1.12
IRF3-228ENST00000601291 AGTR2P50052 363 aa22.02■■□□□ 1.12
IRF3-228ENST00000601291 CTBSQ01459 385 aa22.02■■□□□ 1.12
IRF3-228ENST00000601291 GALNT1Q10472 559 aaPredicted RBP22.02■■□□□ 1.12
IRF3-228ENST00000601291 ILF3Q12906 894 aaKnown RBP eCLIP22.02■■□□□ 1.12
IRF3-228ENST00000601291 METTL2BQ6P1Q9 378 aaKnown RBP22.02■■□□□ 1.12
IRF3-228ENST00000601291 BMP8AQ7Z5Y6 402 aa22.02■■□□□ 1.12
IRF3-228ENST00000601291 SPDYE1Q8NFV5 336 aaPredicted RBP22.02■■□□□ 1.12
IRF3-228ENST00000601291 ZNF473Q8WTR7 871 aaKnown RBP22.02■■□□□ 1.12
IRF3-228ENST00000601291 ATL1Q8WXF7 558 aa22.02■■□□□ 1.12
IRF3-228ENST00000601291 TFGQ92734 400 aaPredicted RBP22.02■■□□□ 1.12
IRF3-228ENST00000601291 SKA1Q96BD8 255 aa22.02■■□□□ 1.12
IRF3-228ENST00000601291 MOCOSQ96EN8 888 aa22.02■■□□□ 1.12
IRF3-228ENST00000601291 RMDN2Q96LZ7 410 aa22.02■■□□□ 1.12
IRF3-228ENST00000601291 SORT1Q99523 831 aa22.02■■□□□ 1.12
IRF3-228ENST00000601291 ILKAPQ9H0C8 392 aaPredicted RBP22.02■■□□□ 1.12
IRF3-228ENST00000601291 RAP2CQ9Y3L5 183 aa22.02■■□□□ 1.12
IRF3-228ENST00000601291 CHRNGP07510 517 aa22.01■■□□□ 1.11
IRF3-228ENST00000601291 ARRB2P32121 409 aa22.01■■□□□ 1.11
IRF3-228ENST00000601291 PRKAA1Q13131 559 aa22.01■■□□□ 1.11
IRF3-228ENST00000601291 EIF2B5Q13144 721 aaKnown RBP22.01■■□□□ 1.11
IRF3-228ENST00000601291 FBXO48Q5FWF7 155 aa22.01■■□□□ 1.11
IRF3-228ENST00000601291 GKAP1Q5VSY0 366 aaPredicted RBP22.01■■□□□ 1.11
IRF3-228ENST00000601291 CAPRIN2Q6IMN6 1127 aaKnown RBP22.01■■□□□ 1.11
IRF3-228ENST00000601291 MBOAT1Q6ZNC8 495 aa22.01■■□□□ 1.11
IRF3-228ENST00000601291 FBXL8Q96CD0 374 aa22.01■■□□□ 1.11
IRF3-228ENST00000601291 ELAC2Q9BQ52 826 aaKnown RBP22.01■■□□□ 1.11
IRF3-228ENST00000601291 TRIM55Q9BYV6 548 aa22.01■■□□□ 1.11
IRF3-228ENST00000601291 TMEM168Q9H0V1 697 aa22.01■■□□□ 1.11
IRF3-228ENST00000601291 PCTPQ9UKL6 214 aa22.01■■□□□ 1.11
IRF3-228ENST00000601291 PNMA8BQ9ULN7 279 aaPredicted RBP22.01■■□□□ 1.11
IRF3-228ENST00000601291 LRRC14BA6NHZ5 514 aa22■■□□□ 1.11
IRF3-228ENST00000601291 TLR4O00206 839 aa22■■□□□ 1.11
IRF3-228ENST00000601291 TAPBPO15533 448 aa22■■□□□ 1.11
IRF3-228ENST00000601291 WNT1P04628 370 aa22■■□□□ 1.11
IRF3-228ENST00000601291 ACTR1BP42025 376 aa22■■□□□ 1.11
IRF3-228ENST00000601291 HALP42357 657 aa22■■□□□ 1.11
IRF3-228ENST00000601291 HSPA7P48741 367 aa22■■□□□ 1.11
IRF3-228ENST00000601291 ACTR1AP61163 376 aa22■■□□□ 1.11
IRF3-228ENST00000601291 UAP1L1Q3KQV9 507 aa22■■□□□ 1.11
IRF3-228ENST00000601291 LYSMD4Q5XG99 296 aa22■■□□□ 1.11
IRF3-228ENST00000601291 SPATA21Q7Z572 469 aa22■■□□□ 1.11
IRF3-228ENST00000601291 DCUN1D3Q8IWE4 304 aa22■■□□□ 1.11
IRF3-228ENST00000601291 PHACTR4Q8IZ21 702 aa22■■□□□ 1.11
IRF3-228ENST00000601291 KIRREL3Q8IZU9 778 aa22■■□□□ 1.11
IRF3-228ENST00000601291 C1orf216Q8TAB5 229 aa22■■□□□ 1.11
IRF3-228ENST00000601291 PIWIL2Q8TC59 973 aaKnown RBP22■■□□□ 1.11
IRF3-228ENST00000601291 ZNF483Q8TF39 744 aaPredicted RBP22■■□□□ 1.11
IRF3-228ENST00000601291 C12orf66Q96MD2 445 aa22■■□□□ 1.11
IRF3-228ENST00000601291 TMEM79Q9BSE2 394 aa22■■□□□ 1.11
IRF3-228ENST00000601291 CD244Q9BZW8 370 aa22■■□□□ 1.11
IRF3-228ENST00000601291 TRIT1Q9H3H1 467 aaKnown RBP22■■□□□ 1.11
IRF3-228ENST00000601291 ZKSCAN7Q9P0L1 754 aaPredicted RBP22■■□□□ 1.11
IRF3-228ENST00000601291 OPTCQ9UBM4 332 aa22■■□□□ 1.11
IRF3-228ENST00000601291 EPB41L3Q9Y2J2 1087 aaPredicted RBP22■■□□□ 1.11
IRF3-228ENST00000601291 E2F3O00716 465 aa21.99■■□□□ 1.11
IRF3-228ENST00000601291 CCR10P46092 362 aa21.99■■□□□ 1.11
IRF3-228ENST00000601291 CLCQ05315 142 aa21.99■■□□□ 1.11
IRF3-228ENST00000601291 LCP2Q13094 533 aa21.99■■□□□ 1.11
IRF3-228ENST00000601291 PMS2CLQ68D20 193 aa21.99■■□□□ 1.11
IRF3-228ENST00000601291 CGB2Q6NT52 195 aa21.99■■□□□ 1.11
IRF3-228ENST00000601291 RPS27LQ71UM5 84 aaKnown RBP21.99■■□□□ 1.11
IRF3-228ENST00000601291 WDR75Q8IWA0 830 aaKnown RBP21.99■■□□□ 1.11
IRF3-228ENST00000601291 LSMEM2Q8N112 164 aa21.99■■□□□ 1.11
IRF3-228ENST00000601291 OR5K2Q8NHB8 316 aa21.99■■□□□ 1.11
IRF3-228ENST00000601291 ESAMQ96AP7 390 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms