RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 MAP7Q14244 749 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 GLE1Q53GS7 698 aaKnown RBP7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 SOWAHCQ53LP3 525 aaPredicted RBP7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 RNF187Q5TA31 235 aaPredicted RBP7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 RNASEH2BQ5TBB1 312 aaKnown RBP7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 MRNIPQ6NTE8 343 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 C8orf74Q6P047 294 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 PCSK4Q6UW60 755 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 CES3Q6UWW8 571 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 NAPRTQ6XQN6 538 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 TIPARPQ7Z3E1 657 aaKnown RBP7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 TMEM135Q86UB9 458 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 PPIL6Q8IXY8 311 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 TBC1D21Q8IYX1 336 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 SLC22A15Q8IZD6 547 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 CACNA2D3Q8IZS8 1091 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 NLGN4XQ8N0W4 816 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 KRT222Q8N1A0 295 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 AGGF1Q8N302 714 aaeCLIP7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 D2HGDHQ8N465 521 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 MMGT1Q8N4V1 131 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 LSM14AQ8ND56 463 aaKnown RBP7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 PHC3Q8NDX5 983 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 NLGN4YQ8NFZ3 816 aaPredicted RBP7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 OR5AR1Q8NGP9 310 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 OR5K2Q8NHB8 316 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 ASZ1Q8WWH4 475 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 LCN9Q8WX39 176 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 LPGAT1Q92604 370 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 ZNF669Q96BR6 464 aaPredicted RBP7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 PANX3Q96QZ0 392 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 OR6C1Q96RD1 312 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 TRIM56Q9BRZ2 755 aaKnown RBP7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 PITPNM3Q9BZ71 974 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 SAMD15Q9P1V8 674 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 GNPTGQ9UJJ9 305 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 ICKQ9UPZ9 632 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 ASF1AQ9Y294 204 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 BTRCQ9Y297 605 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 UTP11Q9Y3A2 253 aaKnown RBP7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 PCDHGA4Q9Y5G9 962 aa7.75□□□□□ -1.17
CHMP2A-205ENST00000600006 IGSF10Q6WRI0 2623 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 CACNA1GO43497 2377 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 ZCWPW2A0A1B0GU75 182 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 UBA6A0AVT1 1052 aaPredicted RBP7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 MAGEB16A2A368 324 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 SDR42E2A6NKP2 422 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 IQCF5A8MTL0 148 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 EFCAB8A8MWE9 144 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 GOLGA8KD6RF30 607 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 GOLGA8TH3BQL2 631 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 GOLGA8MH3BSY2 632 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 ERVH48-1M5A8F1 160 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 BTN3A3O00478 584 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 DNALI1O14645 258 aaPredicted RBP7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 TTI1O43156 1089 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 NDUFS3O75489 264 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 SNRNP200O75643 2136 aaKnown RBP7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 USP1O94782 785 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 SLCO2B1O94956 709 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 ZBTB11O95625 1053 aaPredicted RBP7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 APOA4P06727 396 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 EBLN1P0CF75 366 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 TPBGLP0DKB5 382 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 LIFP15018 202 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 FOLR1P15328 257 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 ZNF28P17035 718 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 ITGB6P18564 788 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 PAMP19021 973 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 POLR2CP19387 275 aaPredicted RBP7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 AOAHP28039 575 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 ADARP55265 1226 aaKnown RBP7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 HSD11B2P80365 405 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 ACY1Q03154 408 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 HSPA14Q0VDF9 509 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 TUBB3Q13509 450 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 KCNAB1Q14722 419 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 MORF4L2Q15014 288 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 BRD3Q15059 726 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 TMED2Q15363 201 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 ANKRD20A4Q4UJ75 823 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 DNAJC21Q5F1R6 531 aaKnown RBP7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 CTSL3PQ5NE16 218 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 PTRHD1Q6GMV3 140 aaKnown RBP7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 ARMC6Q6NXE6 501 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 CASC4Q6P4E1 433 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 UNC5DQ6UXZ4 953 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 SDCCAG8Q86SQ7 713 aaPredicted RBP7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 AMIGO1Q86WK6 493 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 PPP1R3BQ86XI6 285 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 VRK3Q8IV63 474 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 ADGRF3Q8IZF5 1079 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 ESX1Q8N693 406 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 OTUD6BQ8N6M0 293 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 IL22RA1Q8N6P7 574 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 SIDT2Q8NBJ9 832 aaKnown RBP7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 OR4E2Q8NGC2 313 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 TTC9Q92623 222 aa7.74□□□□□ -1.17
CHMP2A-205ENST00000600006 WBP1Q96G27 269 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms