RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 OGFRQ9NZT2 677 aa19.14■□□□□ 0.65
SHKBP1-214ENST00000597396 TMEM9Q9P0T7 183 aa19.14■□□□□ 0.65
SHKBP1-214ENST00000597396 POLG2Q9UHN1 485 aa19.14■□□□□ 0.65
SHKBP1-214ENST00000597396 TRMT6Q9UJA5 497 aaKnown RBP19.14■□□□□ 0.65
SHKBP1-214ENST00000597396 CORO1CQ9ULV4 474 aaPredicted RBP19.14■□□□□ 0.65
SHKBP1-214ENST00000597396 TDRKHQ9Y2W6 561 aaKnown RBP19.14■□□□□ 0.65
SHKBP1-214ENST00000597396 CFAP47Q6ZTR5 3102 aa19.14■□□□□ 0.65
SHKBP1-214ENST00000597396 CCDC187A0A096LP49 1063 aa19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 IGHV5-10-1A0A0J9YXX1 117 aa19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 TCRBV9S1A1TA0A576 114 aa19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 TRABD2BA6NFA1 517 aa19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 KDM1AO60341 852 aa19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 ATP5DP30049 168 aa19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 STX2P32856 288 aa19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 CLCN7P51798 805 aa19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 CAMK2BQ13554 666 aa19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 C3orf38Q5JPI3 329 aa19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 RBM20Q5T481 1227 aaKnown RBP19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 ARMC6Q6NXE6 501 aa19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 IRGCQ6NXR0 463 aa19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 UNC5DQ6UXZ4 953 aa19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 OOSP2Q86WS3 158 aa19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 OR52E1Q8NGJ3 308 aa19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 OR5K2Q8NHB8 316 aa19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 INPP5DQ92835 1189 aa19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 NXPE2Q96DL1 559 aa19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 LIN37Q96GY3 246 aaPredicted RBP19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 SRMSQ9H3Y6 488 aa19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 LRRC4CQ9HCJ2 640 aa19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 SMYD2Q9NRG4 433 aa19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 TAS2R13Q9NYV9 303 aa19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 AKAP7Q9P0M2 348 aaPredicted RBP19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 TXNDC16Q9P2K2 825 aa19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 KLHL42Q9P2K6 505 aa19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 KLHL3Q9UH77 587 aa19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 DHRS7Q9Y394 339 aa19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 PSAT1Q9Y617 370 aa19.13■□□□□ 0.65
SHKBP1-214ENST00000597396 MN1Q10571 1320 aaPredicted RBP19.12■□□□□ 0.65
SHKBP1-214ENST00000597396 OR6C74A6NCV1 312 aa19.12■□□□□ 0.65
SHKBP1-214ENST00000597396 AGRPO00253 132 aa19.12■□□□□ 0.65
SHKBP1-214ENST00000597396 THRAP10827 490 aa19.12■□□□□ 0.65
SHKBP1-214ENST00000597396 GFERP55789 205 aa19.12■□□□□ 0.65
SHKBP1-214ENST00000597396 TRA2AQ13595 282 aaKnown RBP eCLIP19.12■□□□□ 0.65
SHKBP1-214ENST00000597396 GBX1Q14549 363 aa19.12■□□□□ 0.65
SHKBP1-214ENST00000597396 ACSBG2Q5FVE4 666 aa19.12■□□□□ 0.65
SHKBP1-214ENST00000597396 FAM45BPQ6NSW5 357 aa19.12■□□□□ 0.65
SHKBP1-214ENST00000597396 TTC23LQ6PF05 361 aa19.12■□□□□ 0.65
SHKBP1-214ENST00000597396 FOXR1Q6PIV2 292 aa19.12■□□□□ 0.65
SHKBP1-214ENST00000597396 CYS1Q717R9 158 aa19.12■□□□□ 0.65
SHKBP1-214ENST00000597396 CTAGE3PQ8IX95 158 aa19.12■□□□□ 0.65
SHKBP1-214ENST00000597396 OR4E2Q8NGC2 313 aa19.12■□□□□ 0.65
SHKBP1-214ENST00000597396 WDR36Q8NI36 951 aaKnown RBP19.12■□□□□ 0.65
SHKBP1-214ENST00000597396 FAM45AQ8TCE6 357 aa19.12■□□□□ 0.65
SHKBP1-214ENST00000597396 TGM7Q96PF1 710 aa19.12■□□□□ 0.65
SHKBP1-214ENST00000597396 SLC30A3Q99726 388 aa19.12■□□□□ 0.65
SHKBP1-214ENST00000597396 NRSN2Q9GZP1 204 aa19.12■□□□□ 0.65
SHKBP1-214ENST00000597396 HRASLS2Q9NWW9 162 aa19.12■□□□□ 0.65
SHKBP1-214ENST00000597396 NFU1Q9UMS0 254 aa19.12■□□□□ 0.65
SHKBP1-214ENST00000597396 SATB2Q9UPW6 733 aa19.12■□□□□ 0.65
SHKBP1-214ENST00000597396 MED16Q9Y2X0 877 aa19.12■□□□□ 0.65
SHKBP1-214ENST00000597396 AK5Q9Y6K8 562 aa19.12■□□□□ 0.65
SHKBP1-214ENST00000597396 ASPMQ8IZT6 3477 aa19.12■□□□□ 0.65
SHKBP1-214ENST00000597396 PCM1Q15154 2024 aa19.12■□□□□ 0.65
SHKBP1-214ENST00000597396 OR5K3A6NET4 321 aa19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 FAM159BA6NKW6 160 aa19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 SRRM3A6NNA2 597 aaPredicted RBP19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 A8MU76 341 aa19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 CAPN5O15484 640 aaPredicted RBP19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 SNRNP200O75643 2136 aaKnown RBP19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 PIAS1O75925 651 aa19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 ECHS1P30084 290 aa19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 PHBP35232 272 aa19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 GABREP78334 506 aa19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 PRKAA1Q13131 559 aa19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 EIF3IQ13347 325 aaKnown RBP19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 KYNUQ16719 465 aa19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 KLHL38Q2WGJ6 581 aa19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 HECTD2Q5U5R9 776 aa19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 RAB11FIP2Q7L804 512 aa19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 DCUN1D3Q8IWE4 304 aa19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 RCBTB1Q8NDN9 531 aa19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 GIMAP7Q8NHV1 300 aa19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 CD200R1Q8TD46 325 aa19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 FBF1Q8TES7 1133 aa19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 ZDHHC12Q96GR4 267 aa19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 ELMO2Q96JJ3 720 aa19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 CMKLR1Q99788 373 aa19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 TFB2MQ9H5Q4 396 aaKnown RBP19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 NINJ2Q9NZG7 142 aa19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 RUVBL2Q9Y230 463 aaKnown RBP19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 NFS1Q9Y697 457 aa19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 AKAP13Q12802 2813 aa19.11■□□□□ 0.65
SHKBP1-214ENST00000597396 CXorf49A8MYA2 514 aaPredicted RBP19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 C9P02748 559 aa19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 MPOP05164 745 aa19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 CBSLP0DN79 551 aa19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 ENO3P13929 434 aaPredicted RBP19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 POLR2CP19387 275 aaPredicted RBP19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 MCM3P25205 808 aa19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 CSTF2P33240 577 aaKnown RBP eCLIP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms