RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 APMAPQ9HDC9 416 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 HRASLS2Q9NWW9 162 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 SIDT1Q9NXL6 827 aaKnown RBP10.84□□□□□ -0.67
VRK3-210ENST00000596121 SEMA5BQ9P283 1151 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 CIDEBQ9UHD4 219 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 GNPTGQ9UJJ9 305 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 FBXO5Q9UKT4 447 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 ICKQ9UPZ9 632 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 RUVBL2Q9Y230 463 aaKnown RBP10.84□□□□□ -0.67
VRK3-210ENST00000596121 ASF1AQ9Y294 204 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 B3GALT1Q9Y5Z6 326 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 NFS1Q9Y697 457 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 COLEC10Q9Y6Z7 277 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 ZFYVE26Q68DK2 2539 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 PTPRQQ9UMZ3 2332 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 ITPR1Q14643 2758 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 KRT87PA6NCN2 255 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 B4E171 279 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 BTN3A1O00481 513 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 NVLO15381 856 aaKnown RBP10.83□□□□□ -0.68
VRK3-210ENST00000596121 ESR1P03372 595 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 NDUFS1P28331 727 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 TSPAN7P41732 249 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 MLLT3P42568 568 aaPredicted RBP10.83□□□□□ -0.68
VRK3-210ENST00000596121 ABCG1P45844 678 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 CLCN7P51798 805 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 KPNA2P52292 529 aaKnown RBP10.83□□□□□ -0.68
VRK3-210ENST00000596121 SLC7A5Q01650 507 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 MC2RQ01718 297 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 PDIA2Q13087 525 aaKnown RBP10.83□□□□□ -0.68
VRK3-210ENST00000596121 KRT33BQ14525 404 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 HIF1AQ16665 826 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 SYTL3Q4VX76 610 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 ACSBG2Q5FVE4 666 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 SPANXN3Q5MJ09 141 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 CACHD1Q5VU97 1274 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 ANKS6Q68DC2 871 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 PRSS42Q7Z5A4 293 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 FAM129CQ86XR2 697 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 C2CD4AQ8NCU7 369 aaPredicted RBP10.83□□□□□ -0.68
VRK3-210ENST00000596121 OR5K2Q8NHB8 316 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 FLVCR1-AS1Q8TAF5 88 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 ASZ1Q8WWH4 475 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 LCN9Q8WX39 176 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 KLHL6Q8WZ60 621 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 LRRC1Q9BTT6 524 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 MENTQ9BUN1 341 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 SPRY4Q9C004 299 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 ZNF768Q9H5H4 540 aaKnown RBP10.83□□□□□ -0.68
VRK3-210ENST00000596121 LATS2Q9NRM7 1088 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 THSD1Q9NS62 852 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 INTS10Q9NVR2 710 aaKnown RBP10.83□□□□□ -0.68
VRK3-210ENST00000596121 SLC39A1Q9NY26 324 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 SPHK1Q9NYA1 384 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 WHRNQ9P202 907 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 ZC3H7BQ9UGR2 993 aaKnown RBP10.83□□□□□ -0.68
VRK3-210ENST00000596121 TSR3Q9UJK0 312 aaKnown RBP10.83□□□□□ -0.68
VRK3-210ENST00000596121 SSUH2Q9Y2M2 353 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 HEBP2Q9Y5Z4 205 aa10.83□□□□□ -0.68
VRK3-210ENST00000596121 CHD6Q8TD26 2715 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 SMAPO00193 183 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 TOX3O15405 576 aaPredicted RBP10.82□□□□□ -0.68
VRK3-210ENST00000596121 AHSGP02765 367 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 APOA4P06727 396 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 CHRM3P20309 590 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 PEBP1P30086 187 aaKnown RBP10.82□□□□□ -0.68
VRK3-210ENST00000596121 CARSP49589 748 aaKnown RBP10.82□□□□□ -0.68
VRK3-210ENST00000596121 PGGT1BP53609 377 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 ARL4CP56559 192 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 PCBP4P57723 403 aaKnown RBP10.82□□□□□ -0.68
VRK3-210ENST00000596121 PLOD1Q02809 727 aaPredicted RBP10.82□□□□□ -0.68
VRK3-210ENST00000596121 SRSF6Q13247 344 aaKnown RBP10.82□□□□□ -0.68
VRK3-210ENST00000596121 CLN3Q13286 438 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 KCNAB1Q14722 419 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 PLEKHS1Q5SXH7 462 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 TEDDM1Q5T9Z0 273 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 RNF187Q5TA31 235 aaPredicted RBP10.82□□□□□ -0.68
VRK3-210ENST00000596121 ZNF449Q6P9G9 518 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 MAATS1Q7Z4T9 603 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 AMIGO1Q86WK6 493 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 CNTN4Q8IWV2 1026 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 SPACA3Q8IXA5 215 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 TBC1D21Q8IYX1 336 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 SIDT2Q8NBJ9 832 aaKnown RBP10.82□□□□□ -0.68
VRK3-210ENST00000596121 NOA1Q8NC60 698 aaKnown RBP10.82□□□□□ -0.68
VRK3-210ENST00000596121 FBXO36Q8NEA4 188 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 CFAP61Q8NHU2 1237 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 CERS2Q96G23 380 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 ZDHHC12Q96GR4 267 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 SLC41A2Q96JW4 573 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 IL17FQ96PD4 163 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 PANX3Q96QZ0 392 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 TAAR9Q96RI9 348 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 TSSK1BQ9BXA7 367 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 TRIT1Q9H3H1 467 aaKnown RBP10.82□□□□□ -0.68
VRK3-210ENST00000596121 SRMSQ9H3Y6 488 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 ACSL6Q9UKU0 697 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 TDRKHQ9Y2W6 561 aaKnown RBP10.82□□□□□ -0.68
VRK3-210ENST00000596121 PCDHGA3Q9Y5H0 932 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 MRFAP1Q9Y605 127 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms