RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 POLR2CP19387 275 aaPredicted RBP10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 CD82P27701 267 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 PAFAH1B1P43034 410 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 ADARP55265 1226 aaKnown RBP10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 RAB15P59190 212 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 MRPS25P82663 173 aaKnown RBP10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 PLOD1Q02809 727 aaPredicted RBP10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 DHX9Q08211 1270 aaKnown RBP10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 HSPA14Q0VDF9 509 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 KRT33BQ14525 404 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 GBX1Q14549 363 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 KCNAB1Q14722 419 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 CRYMQ14894 314 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 DNTTIP2Q5QJE6 756 aaKnown RBP10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 DCAF12Q5T6F0 453 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 TMEM164Q5U3C3 297 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 ZNF470Q6ECI4 717 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 PTRHD1Q6GMV3 140 aaKnown RBP10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 HIBCHQ6NVY1 386 aaPredicted RBP10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 ZNF449Q6P9G9 518 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 FBXO38Q6PIJ6 1188 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 PCGF5Q86SE9 256 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 ADGRF3Q8IZF5 1079 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 OR5K2Q8NHB8 316 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 LCN9Q8WX39 176 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 STAMBPL1Q96FJ0 436 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 RUNDC3BQ96NL0 473 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 TCF12Q99081 682 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 KRT12Q99456 494 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 MENTQ9BUN1 341 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 SRMSQ9H3Y6 488 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 GALPQ9UBC7 116 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 PILRAQ9UKJ1 303 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 ASF1AQ9Y294 204 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 CRYL1Q9Y2S2 319 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 MED16Q9Y2X0 877 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 MAD1L1Q9Y6D9 718 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 FAM169AQ9Y6X4 670 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 F8W8V4 182 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 STMND1H3BQB6 276 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 TIAF1O95411 115 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 APOA4P06727 396 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 FOLR1P15328 257 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 ZNF28P17035 718 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 PGAM1P18669 254 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 WT1P19544 449 aaPredicted RBP10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 CASQ1P31415 396 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 FMO4P31512 558 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 SLC1A2P43004 574 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 RPL21P46778 160 aaKnown RBP10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 ITGA8P53708 1063 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 TMPRSS3P57727 454 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 C2orf54Q08AI8 447 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 CTBP1Q13363 440 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 GRB7Q14451 532 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 MORF4L2Q15014 288 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 LONRF1Q17RB8 773 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 RNF187Q5TA31 235 aaPredicted RBP10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 ZNF549Q6P9A3 640 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 CEACAM20Q6UY09 585 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 TIPARPQ7Z3E1 657 aaKnown RBP10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 SDCCAG8Q86SQ7 713 aaPredicted RBP10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 VASH2Q86V25 355 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 AMIGO1Q86WK6 493 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 TBC1D21Q8IYX1 336 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 SPATA4Q8NEY3 305 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 FLVCR1-AS1Q8TAF5 88 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 ASZ1Q8WWH4 475 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 UBXN4Q92575 508 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 NKD1Q969G9 470 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 FAM136AQ96C01 138 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 RNF31Q96EP0 1072 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 TEFMQ96QE5 360 aaKnown RBP10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 PANX3Q96QZ0 392 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 OR6C1Q96RD1 312 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 CD180Q99467 661 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 EBNA1BP2Q99848 306 aaKnown RBP10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 TSSK1BQ9BXA7 367 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 PITPNM3Q9BZ71 974 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 ASPSCR1Q9BZE9 553 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 TRIM31Q9BZY9 425 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 TRIT1Q9H3H1 467 aaKnown RBP10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 FBXO6Q9NRD1 293 aaPredicted RBP10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 C20orf96Q9NUD7 363 aaPredicted RBP10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 INTS10Q9NVR2 710 aaKnown RBP10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 PLAGL1Q9UM63 463 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 RUVBL2Q9Y230 463 aaKnown RBP10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 NFS1Q9Y697 457 aa10.66□□□□□ -0.7
SHKBP1-206ENST00000595523 COL6A6A6NMZ7 2263 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 TEX51A0A1B0GUA7 166 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 GSAPA4D1B5 854 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 KRT87PA6NCN2 255 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 POLR1CO15160 346 aaPredicted RBP10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 DLGAP3O95886 979 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 ESR1P03372 595 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 EBLN1P0CF75 366 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 FGF5P12034 268 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 PKMP14618 531 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms