RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 TRIM17Q9Y577 477 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 CPQQ9Y646 472 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 CHD5Q8TDI0 1954 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 H7C0S8 307 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 RAD51BO15315 384 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 ADAM12O43184 909 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 CST1P01037 141 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 BMP1P13497 986 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 NR4A1P22736 598 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 TPD52P55327 224 aaPredicted RBP16.18■□□□□ 0.18
LIG1-206ENST00000594067 IMPG1Q17R60 797 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 ATXN7L2Q5T6C5 722 aaPredicted RBP16.18■□□□□ 0.18
LIG1-206ENST00000594067 NCEH1Q6PIU2 408 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 C8orf59Q8N0T1 100 aaPredicted RBP16.18■□□□□ 0.18
LIG1-206ENST00000594067 GTF2H4Q92759 462 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 EGFL8Q99944 293 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 RRAGCQ9HB90 399 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 CCL27Q9Y4X3 112 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 DGKBQ9Y6T7 804 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 KRBA1A5PL33 1030 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 STC2O76061 302 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 PIGFQ07326 219 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 CYP4F3Q08477 520 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 GPR162Q16538 588 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 DPY19L1Q2PZI1 675 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 TRIM16LQ309B1 348 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 C6orf141Q5SZD1 244 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 CXorf57Q6NSI4 855 aaKnown RBP16.18■□□□□ 0.18
LIG1-206ENST00000594067 CRTC3Q6UUV7 619 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 PIWIL3Q7Z3Z3 882 aaKnown RBP16.18■□□□□ 0.18
LIG1-206ENST00000594067 TMEM173Q86WV6 379 aaPredicted RBP16.18■□□□□ 0.18
LIG1-206ENST00000594067 STK40Q8N2I9 435 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 KRTCAP2Q8N6L1 136 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 TMCO5AQ8N6Q1 288 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 SDCCAG3Q96C92 435 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 AURKBQ96GD4 344 aaPredicted RBP16.18■□□□□ 0.18
LIG1-206ENST00000594067 PDLIM5Q96HC4 596 aaKnown RBP16.18■□□□□ 0.18
LIG1-206ENST00000594067 PPP3R2Q96LZ3 170 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 ZBTB18Q99592 522 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 UGT2B28Q9BY64 529 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 MROQ9BYG7 248 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 FAM118AQ9NWS6 357 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 FCF1Q9Y324 198 aaKnown RBP16.18■□□□□ 0.18
LIG1-206ENST00000594067 ANGPTL3Q9Y5C1 460 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 PRSS21Q9Y6M0 314 aa16.18■□□□□ 0.18
LIG1-206ENST00000594067 A0A1B0GVM2 712 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 IFRD1O00458 451 aaPredicted RBP16.17■□□□□ 0.18
LIG1-206ENST00000594067 KPNA4O00629 521 aaPredicted RBP16.17■□□□□ 0.18
LIG1-206ENST00000594067 GNGT2O14610 69 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 HTR1BP28222 390 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 PIGAP37287 484 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 PRKCZQ05513 592 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 MAPKAPK3Q16644 382 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 MEP1AQ16819 746 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 GTDC1Q4AE62 458 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 SPANXN4Q5MJ08 99 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 NECAB2Q7Z6G3 386 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 SERPINA9Q86WD7 417 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 PHACTR4Q8IZ21 702 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 CLDN19Q8N6F1 224 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 NAT16Q8N8M0 369 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 CHDHQ8NE62 594 aaPredicted RBP16.17■□□□□ 0.18
LIG1-206ENST00000594067 ZNF548Q8NEK5 533 aaPredicted RBP16.17■□□□□ 0.18
LIG1-206ENST00000594067 CLHC1Q8NHS4 586 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 TAMM41Q96BW9 452 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 SLC47A1Q96FL8 570 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 ALPK1Q96QP1 1244 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 CLPBQ9H078 707 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 KLQ9UEF7 1012 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 WARS2Q9UGM6 360 aaKnown RBP16.17■□□□□ 0.18
LIG1-206ENST00000594067 EIF3LQ9Y262 564 aaKnown RBP16.17■□□□□ 0.18
LIG1-206ENST00000594067 C16orf96A6NNT2 1141 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 CLDN25C9JDP6 229 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 H0Y626 953 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 TRIM16O95361 564 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 RPL17P18621 184 aaKnown RBP16.17■□□□□ 0.18
LIG1-206ENST00000594067 MZF1P28698 734 aaPredicted RBP16.17■□□□□ 0.18
LIG1-206ENST00000594067 RPS3AP61247 264 aaKnown RBP16.17■□□□□ 0.18
LIG1-206ENST00000594067 PHKG1Q16816 387 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 MSRB3Q8IXL7 192 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 LIX1Q8N485 282 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 FAM162AQ96A26 154 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 MBOAT4Q96T53 435 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 TTLL2Q9BWV7 592 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 DPY30Q9C005 99 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 AMBRA1Q9C0C7 1298 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 GORASP2Q9H8Y8 452 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 SLC25A37Q9NYZ2 338 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 DNAJB9Q9UBS3 223 aa16.17■□□□□ 0.18
LIG1-206ENST00000594067 ZNF840PA6NDX5 716 aa16.16■□□□□ 0.18
LIG1-206ENST00000594067 TMEM247A6NEH6 219 aa16.16■□□□□ 0.18
LIG1-206ENST00000594067 TBC1D4O60343 1298 aa16.16■□□□□ 0.18
LIG1-206ENST00000594067 PRKD3O94806 890 aa16.16■□□□□ 0.18
LIG1-206ENST00000594067 PRKAR2AP13861 404 aaKnown RBP16.16■□□□□ 0.18
LIG1-206ENST00000594067 ELNP15502 786 aa16.16■□□□□ 0.18
LIG1-206ENST00000594067 AKT1P31749 480 aa16.16■□□□□ 0.18
LIG1-206ENST00000594067 HECTD3Q5T447 861 aa16.16■□□□□ 0.18
LIG1-206ENST00000594067 TTC23Q5W5X9 447 aa16.16■□□□□ 0.18
LIG1-206ENST00000594067 LAIR2Q6ISS4 152 aa16.16■□□□□ 0.18
LIG1-206ENST00000594067 SPESP1Q6UW49 350 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms