RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 SLCO2B1O94956 709 aa17.94■□□□□ 0.46
SHKBP1-202ENST00000593764 ZBTB11O95625 1053 aaPredicted RBP17.94■□□□□ 0.46
SHKBP1-202ENST00000593764 EBLN1P0CF75 366 aa17.94■□□□□ 0.46
SHKBP1-202ENST00000593764 LIFP15018 202 aa17.94■□□□□ 0.46
SHKBP1-202ENST00000593764 RPS3P23396 243 aaKnown RBP eCLIP17.94■□□□□ 0.46
SHKBP1-202ENST00000593764 MAP4P27816 1152 aaKnown RBP17.94■□□□□ 0.46
SHKBP1-202ENST00000593764 PRDX3P30048 256 aaKnown RBP17.94■□□□□ 0.46
SHKBP1-202ENST00000593764 PTGIRP43119 386 aa17.94■□□□□ 0.46
SHKBP1-202ENST00000593764 HSD11B2P80365 405 aa17.94■□□□□ 0.46
SHKBP1-202ENST00000593764 HSPA14Q0VDF9 509 aa17.94■□□□□ 0.46
SHKBP1-202ENST00000593764 PRKAA1Q13131 559 aa17.94■□□□□ 0.46
SHKBP1-202ENST00000593764 ANKRD20A4Q4UJ75 823 aa17.94■□□□□ 0.46
SHKBP1-202ENST00000593764 RNASEH2BQ5TBB1 312 aaKnown RBP17.94■□□□□ 0.46
SHKBP1-202ENST00000593764 MRNIPQ6NTE8 343 aa17.94■□□□□ 0.46
SHKBP1-202ENST00000593764 CASC4Q6P4E1 433 aa17.94■□□□□ 0.46
SHKBP1-202ENST00000593764 TMEM135Q86UB9 458 aa17.94■□□□□ 0.46
SHKBP1-202ENST00000593764 OR5K2Q8NHB8 316 aa17.94■□□□□ 0.46
SHKBP1-202ENST00000593764 ASZ1Q8WWH4 475 aa17.94■□□□□ 0.46
SHKBP1-202ENST00000593764 ELMO2Q96JJ3 720 aa17.94■□□□□ 0.46
SHKBP1-202ENST00000593764 SIGLEC10Q96LC7 697 aa17.94■□□□□ 0.46
SHKBP1-202ENST00000593764 ULBP3Q9BZM4 244 aa17.94■□□□□ 0.46
SHKBP1-202ENST00000593764 TWSG1Q9GZX9 223 aa17.94■□□□□ 0.46
SHKBP1-202ENST00000593764 C1GALT1Q9NS00 363 aa17.94■□□□□ 0.46
SHKBP1-202ENST00000593764 IL1RAPL1Q9NZN1 696 aa17.94■□□□□ 0.46
SHKBP1-202ENST00000593764 LOC101059948A0A1B0GTJ6 334 aa17.93■□□□□ 0.46
SHKBP1-202ENST00000593764 ZCWPW2A0A1B0GU75 182 aa17.93■□□□□ 0.46
SHKBP1-202ENST00000593764 MATN2O00339 956 aa17.93■□□□□ 0.46
SHKBP1-202ENST00000593764 SPAG6O75602 509 aa17.93■□□□□ 0.46
SHKBP1-202ENST00000593764 TIAF1O95411 115 aa17.93■□□□□ 0.46
SHKBP1-202ENST00000593764 IVDP26440 423 aa17.93■□□□□ 0.46
SHKBP1-202ENST00000593764 PPP1R7Q15435 360 aa17.93■□□□□ 0.46
SHKBP1-202ENST00000593764 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.93■□□□□ 0.46
SHKBP1-202ENST00000593764 CTSL3PQ5NE16 218 aa17.93■□□□□ 0.46
SHKBP1-202ENST00000593764 PTRHD1Q6GMV3 140 aaKnown RBP17.93■□□□□ 0.46
SHKBP1-202ENST00000593764 UNC5AQ6ZN44 842 aa17.93■□□□□ 0.46
SHKBP1-202ENST00000593764 SDCCAG8Q86SQ7 713 aaPredicted RBP17.93■□□□□ 0.46
SHKBP1-202ENST00000593764 LRRC6Q86X45 466 aa17.93■□□□□ 0.46
SHKBP1-202ENST00000593764 PPP1R3BQ86XI6 285 aa17.93■□□□□ 0.46
SHKBP1-202ENST00000593764 PPIL6Q8IXY8 311 aa17.93■□□□□ 0.46
SHKBP1-202ENST00000593764 LSM14AQ8ND56 463 aaKnown RBP17.93■□□□□ 0.46
SHKBP1-202ENST00000593764 LPGAT1Q92604 370 aa17.93■□□□□ 0.46
SHKBP1-202ENST00000593764 CAPZA3Q96KX2 299 aa17.93■□□□□ 0.46
SHKBP1-202ENST00000593764 TCF12Q99081 682 aa17.93■□□□□ 0.46
SHKBP1-202ENST00000593764 NAPGQ99747 312 aaPredicted RBP17.93■□□□□ 0.46
SHKBP1-202ENST00000593764 TSSK1BQ9BXA7 367 aa17.93■□□□□ 0.46
SHKBP1-202ENST00000593764 TRIT1Q9H3H1 467 aaKnown RBP17.93■□□□□ 0.46
SHKBP1-202ENST00000593764 SAMD15Q9P1V8 674 aa17.93■□□□□ 0.46
SHKBP1-202ENST00000593764 POLG2Q9UHN1 485 aa17.93■□□□□ 0.46
SHKBP1-202ENST00000593764 GNPTGQ9UJJ9 305 aa17.93■□□□□ 0.46
SHKBP1-202ENST00000593764 BTRCQ9Y297 605 aa17.93■□□□□ 0.46
SHKBP1-202ENST00000593764 SAR1BQ9Y6B6 198 aa17.93■□□□□ 0.46
SHKBP1-202ENST00000593764 SPTBP11277 2137 aa17.93■□□□□ 0.46
SHKBP1-202ENST00000593764 GSAPA4D1B5 854 aa17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 SLC9B1P1A6NJY1 282 aa17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 KIAA0754O94854 1291 aa17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 APOA4P06727 396 aa17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 ADARP55265 1226 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 EIF3BP55884 814 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 ABHD18Q0P651 414 aa17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 TUBB3Q13509 450 aa17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 PTK6Q13882 451 aa17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 DHX34Q14147 1143 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 MAP7Q14244 749 aa17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 DNAJC21Q5F1R6 531 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 PWWP2BQ6NUJ5 590 aa17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 NEPROQ6NW34 567 aa17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 CENPUQ71F23 418 aa17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 CILP2Q8IUL8 1156 aa17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 RASGRP3Q8IV61 690 aa17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 UNC5BQ8IZJ1 945 aa17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 OTUD6BQ8N6M0 293 aa17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 SLC39A7Q92504 469 aa17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 WBP1Q96G27 269 aa17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 SLC12A9Q9BXP2 914 aa17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 PITPNM3Q9BZ71 974 aa17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 PDE7BQ9NP56 450 aa17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 FGF21Q9NSA1 209 aa17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 ACTR10Q9NZ32 417 aa17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 TDRKHQ9Y2W6 561 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 RPS6KL1Q9Y6S9 549 aa17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 PIEZO2Q9H5I5 2752 aa17.92■□□□□ 0.46
SHKBP1-202ENST00000593764 TK2O00142 265 aa17.91■□□□□ 0.46
SHKBP1-202ENST00000593764 DNALI1O14645 258 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-202ENST00000593764 ST6GAL1P15907 406 aa17.91■□□□□ 0.46
SHKBP1-202ENST00000593764 PAMP19021 973 aa17.91■□□□□ 0.46
SHKBP1-202ENST00000593764 OGNP20774 298 aaKnown RBP17.91■□□□□ 0.46
SHKBP1-202ENST00000593764 CDH3P22223 829 aa17.91■□□□□ 0.46
SHKBP1-202ENST00000593764 FMO4P31512 558 aa17.91■□□□□ 0.46
SHKBP1-202ENST00000593764 SHMT2P34897 504 aa17.91■□□□□ 0.46
SHKBP1-202ENST00000593764 ARL4DP49703 201 aa17.91■□□□□ 0.46
SHKBP1-202ENST00000593764 TUBB4BP68371 445 aa17.91■□□□□ 0.46
SHKBP1-202ENST00000593764 CYP4F2P78329 520 aa17.91■□□□□ 0.46
SHKBP1-202ENST00000593764 ACY1Q03154 408 aa17.91■□□□□ 0.46
SHKBP1-202ENST00000593764 ABRQ12979 859 aa17.91■□□□□ 0.46
SHKBP1-202ENST00000593764 TUBB2AQ13885 445 aa17.91■□□□□ 0.46
SHKBP1-202ENST00000593764 ZNF789Q5FWF6 425 aa17.91■□□□□ 0.46
SHKBP1-202ENST00000593764 BPHLQ86WA6 291 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-202ENST00000593764 ESX1Q8N693 406 aa17.91■□□□□ 0.46
SHKBP1-202ENST00000593764 GALNT6Q8NCL4 622 aa17.91■□□□□ 0.46
SHKBP1-202ENST00000593764 FLVCR1-AS1Q8TAF5 88 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms