RNA–Protein interactions for RNA: ENST00000592594.5

TMC6-223, Transcript of transmembrane channel like 6, human

TSL 4

Gene TMC6, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-223	ENST00000592594	IFRD1	O00458	451 aa	Predicted RBP	15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	BTN3A1	O00481	513 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	HAUS5	O94927	633 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	TTC4	O95801	387 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	JMJD7	P0C870	316 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	PKM	P14618	531 aa	Known RBP	15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	NDUFS1	P28331	727 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	ABCG1	P45844	678 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	PPM1F	P49593	454 aa	Predicted RBP	15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	CLCN7	P51798	805 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	KPNA2	P52292	529 aa	Known RBP	15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	ARL4C	P56559	192 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	SLC7A5	Q01650	507 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	PDIA2	Q13087	525 aa	Known RBP	15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	THOC5	Q13769	683 aa	Known RBP	15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	WHAMMP3	Q1A5X7	153 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	IRGC	Q6NXR0	463 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	FBXO38	Q6PIJ6	1188 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	ADGRF3	Q8IZF5	1079 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	LSMEM2	Q8N112	164 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	LMNTD1	Q8N9Z9	388 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	AGBL5	Q8NDL9	886 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	OR4E2	Q8NGC2	313 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	OR5K2	Q8NHB8	316 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	ASZ1	Q8WWH4	475 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	KLHL6	Q8WZ60	621 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	USP7	Q93009	1102 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	LRRC39	Q96DD0	335 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	CRELD1	Q96HD1	420 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	LRRC1	Q9BTT6	524 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	ZNF768	Q9H5H4	540 aa	Known RBP	15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	TFB2M	Q9H5Q4	396 aa	Known RBP	15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	APMAP	Q9HDC9	416 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	LATS2	Q9NRM7	1088 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	ZC3H7B	Q9UGR2	993 aa	Known RBP	15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	ACSL6	Q9UKU0	697 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	PLAGL1	Q9UM63	463 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	ASF1A	Q9Y294	204 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	NFS1	Q9Y697	457 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	COLEC10	Q9Y6Z7	277 aa		15.83	■□□□□ 0.12
TMC6-223	ENST00000592594	ESYT3	A0FGR9	886 aa		15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	OR6C74	A6NCV1	312 aa		15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	EFCAB7	A8K855	629 aa		15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	C1QA	P02745	245 aa		15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	POLR2C	P19387	275 aa	Predicted RBP	15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	ITPKB	P27987	946 aa		15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	RBMS1	P29558	406 aa	Known RBP	15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	PEBP1	P30086	187 aa	Known RBP	15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	MAPK10	P53779	464 aa		15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	SH3BP2	P78314	561 aa		15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	CKAP4	Q07065	602 aa	Known RBP	15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	CCSMST1	Q4G0I0	132 aa		15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	ACSBG2	Q5FVE4	666 aa		15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	RBM20	Q5T481	1227 aa	Known RBP	15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	TEDDM1	Q5T9Z0	273 aa		15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	MAATS1	Q7Z4T9	603 aa		15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	FBXO36	Q8NEA4	188 aa		15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	SEC14L1	Q92503	715 aa		15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	ART4	Q93070	314 aa		15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	PANX3	Q96QZ0	392 aa		15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	MAP3K3	Q99759	626 aa		15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	FAM167B	Q9BTA0	163 aa		15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	NAT9	Q9BTE0	207 aa		15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	SMYD2	Q9NRG4	433 aa		15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	THSD1	Q9NS62	852 aa		15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	HRASLS2	Q9NWW9	162 aa		15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	CIDEB	Q9UHD4	219 aa		15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	POMT2	Q9UKY4	750 aa		15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	SSUH2	Q9Y2M2	353 aa		15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	B3GALT1	Q9Y5Z6	326 aa		15.82	■□□□□ 0.12
TMC6-223	ENST00000592594	MDC1	Q14676	2089 aa	Known RBP	15.82	■□□□□ 0.12
TMC6-223	ENST00000592594		B4E171	279 aa		15.81	■□□□□ 0.12
TMC6-223	ENST00000592594	NVL	O15381	856 aa	Known RBP	15.81	■□□□□ 0.12
TMC6-223	ENST00000592594	APOA4	P06727	396 aa		15.81	■□□□□ 0.12
TMC6-223	ENST00000592594	TSPAN7	P41732	249 aa		15.81	■□□□□ 0.12
TMC6-223	ENST00000592594	BDKRB1	P46663	353 aa		15.81	■□□□□ 0.12
TMC6-223	ENST00000592594	SEPHS1	P49903	392 aa		15.81	■□□□□ 0.12
TMC6-223	ENST00000592594	PGGT1B	P53609	377 aa		15.81	■□□□□ 0.12
TMC6-223	ENST00000592594	PCBP4	P57723	403 aa	Known RBP	15.81	■□□□□ 0.12
TMC6-223	ENST00000592594	MC2R	Q01718	297 aa		15.81	■□□□□ 0.12
TMC6-223	ENST00000592594	PLOD1	Q02809	727 aa	Predicted RBP	15.81	■□□□□ 0.12
TMC6-223	ENST00000592594	ABR	Q12979	859 aa		15.81	■□□□□ 0.12
TMC6-223	ENST00000592594	SRSF6	Q13247	344 aa	Known RBP	15.81	■□□□□ 0.12
TMC6-223	ENST00000592594	CLN3	Q13286	438 aa		15.81	■□□□□ 0.12
TMC6-223	ENST00000592594	FRG1	Q14331	258 aa	Known RBP	15.81	■□□□□ 0.12
TMC6-223	ENST00000592594	PLEKHS1	Q5SXH7	462 aa		15.81	■□□□□ 0.12
TMC6-223	ENST00000592594	CACHD1	Q5VU97	1274 aa		15.81	■□□□□ 0.12
TMC6-223	ENST00000592594	ANKS6	Q68DC2	871 aa		15.81	■□□□□ 0.12
TMC6-223	ENST00000592594	OOSP2	Q86WS3	158 aa		15.81	■□□□□ 0.12
TMC6-223	ENST00000592594	FAM129C	Q86XR2	697 aa		15.81	■□□□□ 0.12
TMC6-223	ENST00000592594	RASGRP3	Q8IV61	690 aa		15.81	■□□□□ 0.12
TMC6-223	ENST00000592594	LMNTD2	Q8IXW0	634 aa		15.81	■□□□□ 0.12
TMC6-223	ENST00000592594	TBC1D21	Q8IYX1	336 aa		15.81	■□□□□ 0.12
TMC6-223	ENST00000592594	LINC01555	Q8NAE3	123 aa		15.81	■□□□□ 0.12
TMC6-223	ENST00000592594	SIDT2	Q8NBJ9	832 aa	Known RBP	15.81	■□□□□ 0.12
TMC6-223	ENST00000592594	FBXO25	Q8TCJ0	367 aa		15.81	■□□□□ 0.12
TMC6-223	ENST00000592594	LCN9	Q8WX39	176 aa		15.81	■□□□□ 0.12
TMC6-223	ENST00000592594	NAF1	Q96HR8	494 aa	Known RBP	15.81	■□□□□ 0.12
TMC6-223	ENST00000592594	SLC41A2	Q96JW4	573 aa		15.81	■□□□□ 0.12
TMC6-223	ENST00000592594	DCBLD2	Q96PD2	775 aa		15.81	■□□□□ 0.12

Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms