RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 TUBB4BP68371 445 aa13.46□□□□□ -0.25
APOC1-208ENST00000592535 NFATC3Q12968 1075 aa13.46□□□□□ -0.25
APOC1-208ENST00000592535 TUBB2AQ13885 445 aa13.46□□□□□ -0.25
APOC1-208ENST00000592535 TPSAB1Q15661 275 aa13.46□□□□□ -0.25
APOC1-208ENST00000592535 AARS2Q5JTZ9 985 aaKnown RBP13.46□□□□□ -0.25
APOC1-208ENST00000592535 TMTC4Q5T4D3 741 aa13.46□□□□□ -0.25
APOC1-208ENST00000592535 C16orf46Q6P387 395 aa13.46□□□□□ -0.25
APOC1-208ENST00000592535 TTC27Q6P3X3 843 aa13.46□□□□□ -0.25
APOC1-208ENST00000592535 LRRC8BQ6P9F7 803 aa13.46□□□□□ -0.25
APOC1-208ENST00000592535 BPHLQ86WA6 291 aaPredicted RBP13.46□□□□□ -0.25
APOC1-208ENST00000592535 REXO1L1PQ8IX06 675 aa13.46□□□□□ -0.25
APOC1-208ENST00000592535 ZNF501Q96CX3 271 aaPredicted RBP13.46□□□□□ -0.25
APOC1-208ENST00000592535 TUBB2BQ9BVA1 445 aa13.46□□□□□ -0.25
APOC1-208ENST00000592535 AP1M1Q9BXS5 423 aa13.46□□□□□ -0.25
APOC1-208ENST00000592535 PITPNM3Q9BZ71 974 aa13.46□□□□□ -0.25
APOC1-208ENST00000592535 KLHL25Q9H0H3 589 aa13.46□□□□□ -0.25
APOC1-208ENST00000592535 LHX9Q9NQ69 397 aa13.46□□□□□ -0.25
APOC1-208ENST00000592535 ACTR10Q9NZ32 417 aa13.46□□□□□ -0.25
APOC1-208ENST00000592535 ANAPC5Q9UJX4 755 aa13.46□□□□□ -0.25
APOC1-208ENST00000592535 PADI1Q9ULC6 663 aa13.46□□□□□ -0.25
APOC1-208ENST00000592535 TDRKHQ9Y2W6 561 aaKnown RBP13.46□□□□□ -0.25
APOC1-208ENST00000592535 KALRNO60229 2985 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.45□□□□□ -0.26
APOC1-208ENST00000592535 C2orf74A8MZ97 194 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 F8W8V4 182 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 AP3B1O00203 1094 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 SCRG1O75711 98 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 KRT14P02533 472 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 CCNYL3P0C7X3 344 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 PVRP15151 417 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 TCN2P20062 427 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 PPARGP37231 505 aaPredicted RBP13.45□□□□□ -0.26
APOC1-208ENST00000592535 CDK16Q00536 496 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 MC1RQ01726 317 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 PLOD1Q02809 727 aaPredicted RBP13.45□□□□□ -0.26
APOC1-208ENST00000592535 GPS1Q13098 491 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 DNASE1L3Q13609 305 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 KCNJ11Q14654 390 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 CES3Q6UWW8 571 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 UNC5AQ6ZN44 842 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 TMEM126BQ8IUX1 230 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 VRK3Q8IV63 474 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 TBC1D21Q8IYX1 336 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 KRT222Q8N1A0 295 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 SLC35F6Q8N357 371 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 OR5K2Q8NHB8 316 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 CT55Q8WUE5 264 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 MAGOHBQ96A72 148 aaKnown RBP13.45□□□□□ -0.26
APOC1-208ENST00000592535 MFSD3Q96ES6 412 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 PBKQ96KB5 322 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 CATSPER2Q96P56 530 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 KIFC1Q9BW19 673 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 CARD6Q9BX69 1037 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 AKIRIN1Q9H9L7 192 aaPredicted RBP13.45□□□□□ -0.26
APOC1-208ENST00000592535 MRM3Q9HC36 420 aaKnown RBP13.45□□□□□ -0.26
APOC1-208ENST00000592535 KCND1Q9NSA2 647 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 PLAGL1Q9UM63 463 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 CDYLQ9Y232 598 aa13.45□□□□□ -0.26
APOC1-208ENST00000592535 PIPSLA2A3N6 862 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 PRMT5O14744 637 aaPredicted RBP13.44□□□□□ -0.26
APOC1-208ENST00000592535 KATNA1O75449 491 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 ARNTP27540 789 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 SHMT2P34897 504 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 MAGEA6P43360 314 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 CCR10P46092 362 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 TTPAP49638 278 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 POLE2P56282 527 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 HSPA14Q0VDF9 509 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 ABRQ12979 859 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 DEFB109BQ30KR1 87 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 PRAMEF17Q5VTA0 474 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 ANKRD22Q5VYY1 191 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 FAM199XQ6PEV8 388 aaPredicted RBP13.44□□□□□ -0.26
APOC1-208ENST00000592535 SPESP1Q6UW49 350 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 TRIM73Q86UV7 250 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 SLC22A15Q8IZD6 547 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 MPP5Q8N3R9 675 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 OTUD6BQ8N6M0 293 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 OR8K5Q8NH50 307 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 COG1Q8WTW3 980 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 TRAPPC9Q96Q05 1148 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 RUFY1Q96T51 708 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 TSSK1BQ9BXA7 367 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 P2RY12Q9H244 342 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 KCNF1Q9H3M0 494 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 LATS2Q9NRM7 1088 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 STARD5Q9NSY2 213 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 GEMIN8Q9NWZ8 242 aaKnown RBP13.44□□□□□ -0.26
APOC1-208ENST00000592535 SPHK1Q9NYA1 384 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 POLG2Q9UHN1 485 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 SOX13Q9UN79 622 aa13.44□□□□□ -0.26
APOC1-208ENST00000592535 TMEM150CB9EJG8 249 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 GOLGA8KD6RF30 607 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 GOLGA8TH3BQL2 631 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 PGRMC1O00264 195 aaKnown RBP13.43□□□□□ -0.26
APOC1-208ENST00000592535 CPNE3O75131 537 aaKnown RBP13.43□□□□□ -0.26
APOC1-208ENST00000592535 AVILO75366 819 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 GPC4O75487 556 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 NDUFS3O75489 264 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 TMEM63AO94886 807 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms