RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 BRINP2Q9C0B6 783 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 MOV10Q9HCE1 1003 aaKnown RBP13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 DHRS7Q9Y394 339 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 CLDN25C9JDP6 229 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 TNFRSF11BO00300 401 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 PIAS1O75925 651 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 TSPAN9O75954 239 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 FECHP22830 423 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 ACADLP28330 430 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 ARFIP1P53367 373 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 HERC3Q15034 1050 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 AMZ1Q400G9 498 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 FBXL22Q6P050 247 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 FKBPLQ9UIM3 349 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 TYRP14679 529 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 GATMP50440 423 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 GALK1P51570 392 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 RAB2AP61019 212 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 GRM2Q14416 872 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 UBR7Q8N806 425 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 FAM98AQ8NCA5 519 aaKnown RBP13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 OR2AP1Q8NGE2 309 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 SPOCK2Q92563 424 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 NODALQ96S42 347 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 MCMBPQ9BTE3 642 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 OR2AG1Q9H205 316 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 NKX2-4Q9H2Z4 354 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 CHRAC1Q9NRG0 131 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 SEC14L3Q9UDX4 400 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 PFDN2Q9UHV9 154 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 TMA7Q9Y2S6 64 aaKnown RBP13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 A0A1W2PRG6 482 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 A8MUI8 341 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 IFNW1P05000 195 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 C8GP07360 202 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 PTPN5P54829 565 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 ABATP80404 500 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 MYBPC1Q00872 1141 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 CLCQ05315 142 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 RALGDSQ12967 914 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 TMEM44Q2T9K0 475 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 RNF220Q5VTB9 566 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 RAB2BQ8WUD1 216 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 PPM1MQ96MI6 270 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 TSSK3Q96PN8 268 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 BCAS3Q9H6U6 928 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 MCUBQ9NWR8 336 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 SNX7Q9UNH6 387 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 C9J4A7 227 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 ZNF865P0CJ78 1059 aaPredicted RBP13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 CYBAP13498 195 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 MNDAP41218 407 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 HSF2Q03933 536 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 TRIM32Q13049 653 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 C6orf52Q5T4I8 152 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 LCN1P1Q5VSP4 162 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 MED27Q6P2C8 311 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 FAM171BQ6P995 826 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 MPP5Q8N3R9 675 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 CBR4Q8N4T8 237 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 APOLD1Q96LR9 279 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 GSDMCQ9BYG8 508 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 CXorf21Q9HAI6 301 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 GRIN2DO15399 1336 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 PI15O43692 258 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 KERAO60938 352 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 REM1O75628 298 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 NT5EP21589 574 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 HSD17B2P37059 387 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 ADGRE1Q14246 886 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 GPR33Q49SQ1 333 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 ANO7Q6IWH7 933 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 TMC8Q8IU68 726 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 CMTM8Q8IZV2 173 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 BANPQ8N9N5 519 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 ZNF563Q8TA94 476 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 LENG8Q96PV6 779 aaPredicted RBP13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 ATG10Q9H0Y0 220 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 CDC14AQ9UNH5 594 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 NUP188Q5SRE5 1749 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 ZNF623O75123 536 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 SEMA5AQ13591 1074 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 SULT1C3Q6IMI6 304 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 SETD7Q8WTS6 366 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 CLEC4CQ8WTT0 213 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 CYB5D2Q8WUJ1 264 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 RFKQ969G6 155 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 RBM18Q96H35 190 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 CADM1Q9BY67 442 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 EBF3Q9H4W6 596 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 MAT2BQ9NZL9 334 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 CALML5Q9NZT1 146 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 HCN3Q9P1Z3 774 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 MTRRQ9UBK8 725 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 CKLFQ9UBR5 152 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 NOCTQ9UK39 431 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 CNTN6Q9UQ52 1028 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 DPPA5A6NC42 116 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 LEFTY2O00292 366 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 TFPIP10646 304 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms