RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 PSMA3P25788 255 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 PBLDP30039 288 aaPredicted RBP10.11□□□□□ -0.79
VPS4B-207ENST00000591519 CETN2P41208 172 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 CD151P48509 253 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 ZNF140P52738 457 aaPredicted RBP10.11□□□□□ -0.79
VPS4B-207ENST00000591519 OTUD4Q01804 1114 aaKnown RBP10.11□□□□□ -0.79
VPS4B-207ENST00000591519 GPS2Q13227 327 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 GPR19Q15760 415 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 PLEKHS1Q5SXH7 462 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 PAPD7Q5XG87 772 aaKnown RBP10.11□□□□□ -0.79
VPS4B-207ENST00000591519 KCTD11Q693B1 232 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 ARMC6Q6NXE6 501 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 DUS1LQ6P1R4 473 aaKnown RBP10.11□□□□□ -0.79
VPS4B-207ENST00000591519 SNX20Q7Z614 316 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 CDKL3Q8IVW4 592 aaPredicted RBP10.11□□□□□ -0.79
VPS4B-207ENST00000591519 NXPE1Q8N323 547 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 RNF10Q8N5U6 811 aaKnown RBP10.11□□□□□ -0.79
VPS4B-207ENST00000591519 LILRA3Q8N6C8 439 aaPredicted RBP10.11□□□□□ -0.79
VPS4B-207ENST00000591519 ARMC2Q8NEN0 867 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 OR4E2Q8NGC2 313 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 HM13Q8TCT9 377 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 ADAMTS17Q8TE56 1095 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 DCUN1D1Q96GG9 259 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 RMDN2Q96LZ7 410 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 SPATA13Q96N96 652 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 RUFY1Q96T51 708 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 COPS8Q99627 209 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 APOL2Q9BQE5 337 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 PITPNM3Q9BZ71 974 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 KCNF1Q9H3M0 494 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 TFB2MQ9H5Q4 396 aaKnown RBP10.11□□□□□ -0.79
VPS4B-207ENST00000591519 POMT2Q9UKY4 750 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 PLAAQ9Y263 795 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 MAN2B2Q9Y2E5 1009 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 PCDHGA9Q9Y5G4 932 aaKnown RBP10.11□□□□□ -0.79
VPS4B-207ENST00000591519 MED13Q9UHV7 2174 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 SPTBP11277 2137 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 SLC9B1P1A6NJY1 282 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 MIF4GDA9UHW6 222 aaKnown RBP10.1□□□□□ -0.79
VPS4B-207ENST00000591519 KCNN4O15554 427 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 CEACAM4O75871 244 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 STK10O94804 968 aaKnown RBP10.1□□□□□ -0.79
VPS4B-207ENST00000591519 TJP3O95049 919 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 PDGFAP04085 211 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 POLBP06746 335 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 GSTM1P09488 218 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 POLR2CP19387 275 aaPredicted RBP10.1□□□□□ -0.79
VPS4B-207ENST00000591519 NR1D1P20393 614 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 ITGALP20701 1170 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 PSMB4P28070 264 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 PRDX3P30048 256 aaKnown RBP10.1□□□□□ -0.79
VPS4B-207ENST00000591519 RORAP35398 523 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 EIF3EP60228 445 aaKnown RBP10.1□□□□□ -0.79
VPS4B-207ENST00000591519 GSTM4Q03013 218 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 PRKAA1Q13131 559 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 RPA4Q13156 261 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 OLIG2Q13516 323 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 PARP6Q2NL67 630 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 ZNF789Q5FWF6 425 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 DARS2Q6PI48 645 aaKnown RBP10.1□□□□□ -0.79
VPS4B-207ENST00000591519 TMEM126BQ8IUX1 230 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 DSELQ8IZU8 1212 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 FAM26EQ8N5C1 309 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 OR13C4Q8NGS5 318 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 NAT14Q8WUY8 206 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 CPT1BQ92523 772 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 PPM1MQ96MI6 270 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 ALS2CR12Q96Q35 445 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 NLNQ9BYT8 704 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 TRIM55Q9BYV6 548 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 OR52A5Q9H2C5 316 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 SRMSQ9H3Y6 488 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 MVB12BQ9H7P6 319 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 TRMT1Q9NXH9 659 aaKnown RBP10.1□□□□□ -0.79
VPS4B-207ENST00000591519 ZDHHC3Q9NYG2 299 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 CRLS1Q9UJA2 301 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 MAP4K5Q9Y4K4 846 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 PCDHGB7Q9Y5F8 929 aa10.1□□□□□ -0.79
VPS4B-207ENST00000591519 LRRK2Q5S007 2527 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 TCRBV7S2A1N4TA0A589 114 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 BTN3A3O00478 584 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 DNAJB5O75953 348 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 CAPN1P07384 714 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 CDH3P22223 829 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 MLLT10P55197 1068 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 RPS18P62269 152 aaKnown RBP10.09□□□□□ -0.79
VPS4B-207ENST00000591519 IL10RAQ13651 578 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 KRT33BQ14525 404 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 RPS6KA1Q15418 735 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 SEL1L2Q5TEA6 688 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 MEI1Q5TIA1 1274 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 LCN10Q6JVE6 187 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 FBXO38Q6PIJ6 1188 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 ATCAYQ86WG3 371 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 CCDC116Q8IYX3 515 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 CCDC110Q8TBZ0 833 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 LCN9Q8WX39 176 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 MR1Q95460 341 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 CDKN2AIPNLQ96HQ2 116 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 HES6Q96HZ4 224 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms