RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 BLKP51451 505 aa16.23■□□□□ 0.19
GCDH-213ENST00000590627 CLCNKAP51800 687 aa16.23■□□□□ 0.19
GCDH-213ENST00000590627 HK3P52790 923 aa16.23■□□□□ 0.19
GCDH-213ENST00000590627 PGGT1BP53609 377 aa16.23■□□□□ 0.19
GCDH-213ENST00000590627 PLOD1Q02809 727 aaPredicted RBP16.23■□□□□ 0.19
GCDH-213ENST00000590627 PPARDQ03181 441 aa16.23■□□□□ 0.19
GCDH-213ENST00000590627 RPA4Q13156 261 aa16.23■□□□□ 0.19
GCDH-213ENST00000590627 LRP8Q14114 963 aa16.23■□□□□ 0.19
GCDH-213ENST00000590627 ZNF460Q14592 562 aa16.23■□□□□ 0.19
GCDH-213ENST00000590627 TTMPQ5BVD1 217 aa16.23■□□□□ 0.19
GCDH-213ENST00000590627 XKR5Q6UX68 686 aa16.23■□□□□ 0.19
GCDH-213ENST00000590627 CLEC14AQ86T13 490 aa16.23■□□□□ 0.19
GCDH-213ENST00000590627 SRRM1Q8IYB3 904 aaKnown RBP16.23■□□□□ 0.19
GCDH-213ENST00000590627 NKAPQ8N5F7 415 aaKnown RBP16.23■□□□□ 0.19
GCDH-213ENST00000590627 LSM14AQ8ND56 463 aaKnown RBP16.23■□□□□ 0.19
GCDH-213ENST00000590627 ELMO1Q92556 727 aa16.23■□□□□ 0.19
GCDH-213ENST00000590627 TSACCQ96A04 125 aaPredicted RBP16.23■□□□□ 0.19
GCDH-213ENST00000590627 ALKBH8Q96BT7 664 aaKnown RBP16.23■□□□□ 0.19
GCDH-213ENST00000590627 FAM136AQ96C01 138 aa16.23■□□□□ 0.19
GCDH-213ENST00000590627 SSU72Q9NP77 194 aaKnown RBP16.23■□□□□ 0.19
GCDH-213ENST00000590627 MKS1Q9NXB0 559 aa16.23■□□□□ 0.19
GCDH-213ENST00000590627 SLC23A2Q9UGH3 650 aa16.23■□□□□ 0.19
GCDH-213ENST00000590627 NOVA2Q9UNW9 492 aaKnown RBP16.23■□□□□ 0.19
GCDH-213ENST00000590627 CDYLQ9Y232 598 aa16.23■□□□□ 0.19
GCDH-213ENST00000590627 PRKAB1Q9Y478 270 aa16.23■□□□□ 0.19
GCDH-213ENST00000590627 TDRD6O60522 2096 aaKnown RBP16.23■□□□□ 0.19
GCDH-213ENST00000590627 PIKFYVEQ9Y2I7 2098 aa16.23■□□□□ 0.19
GCDH-213ENST00000590627 NEMP2A6NFY4 417 aa16.22■□□□□ 0.19
GCDH-213ENST00000590627 BRINP1O60477 761 aa16.22■□□□□ 0.19
GCDH-213ENST00000590627 TSPAN12O95859 305 aa16.22■□□□□ 0.19
GCDH-213ENST00000590627 TNFP01375 233 aa16.22■□□□□ 0.19
GCDH-213ENST00000590627 GIMD1P0DJR0 217 aa16.22■□□□□ 0.19
GCDH-213ENST00000590627 CKMT1AP12532 417 aa16.22■□□□□ 0.19
GCDH-213ENST00000590627 ENO3P13929 434 aaPredicted RBP16.22■□□□□ 0.19
GCDH-213ENST00000590627 VCLP18206 1134 aa16.22■□□□□ 0.19
GCDH-213ENST00000590627 IL2P60568 153 aa16.22■□□□□ 0.19
GCDH-213ENST00000590627 GPS2Q13227 327 aa16.22■□□□□ 0.19
GCDH-213ENST00000590627 METRNLQ641Q3 311 aa16.22■□□□□ 0.19
GCDH-213ENST00000590627 LRRC8EQ6NSJ5 796 aa16.22■□□□□ 0.19
GCDH-213ENST00000590627 HID1Q8IV36 788 aa16.22■□□□□ 0.19
GCDH-213ENST00000590627 GLMNQ92990 594 aa16.22■□□□□ 0.19
GCDH-213ENST00000590627 SMC6Q96SB8 1091 aa16.22■□□□□ 0.19
GCDH-213ENST00000590627 COG4Q9H9E3 785 aa16.22■□□□□ 0.19
GCDH-213ENST00000590627 SARS2Q9NP81 518 aaKnown RBP16.22■□□□□ 0.19
GCDH-213ENST00000590627 EVA1BQ9NVM1 165 aa16.22■□□□□ 0.19
GCDH-213ENST00000590627 UCKL1Q9NWZ5 548 aa16.22■□□□□ 0.19
GCDH-213ENST00000590627 NLGN3Q9NZ94 848 aa16.22■□□□□ 0.19
GCDH-213ENST00000590627 KLF15Q9UIH9 416 aa16.22■□□□□ 0.19
GCDH-213ENST00000590627 MOSPD1Q9UJG1 213 aa16.22■□□□□ 0.19
GCDH-213ENST00000590627 HELZ2Q9BYK8 2649 aaKnown RBP16.22■□□□□ 0.19
GCDH-213ENST00000590627 GOLGA8RI6L899 631 aa16.21■□□□□ 0.19
GCDH-213ENST00000590627 CSF2P04141 144 aa16.21■□□□□ 0.19
GCDH-213ENST00000590627 GP1BAP07359 652 aa16.21■□□□□ 0.19
GCDH-213ENST00000590627 GSTA1P08263 222 aa16.21■□□□□ 0.19
GCDH-213ENST00000590627 ACP5P13686 325 aa16.21■□□□□ 0.19
GCDH-213ENST00000590627 NME1P15531 152 aaKnown RBP16.21■□□□□ 0.19
GCDH-213ENST00000590627 RGS4P49798 205 aa16.21■□□□□ 0.19
GCDH-213ENST00000590627 MAGOHP61326 146 aaKnown RBP16.21■□□□□ 0.19
GCDH-213ENST00000590627 HNRNPKP61978 463 aaKnown RBP eCLIP16.21■□□□□ 0.19
GCDH-213ENST00000590627 INSCQ1MX18 579 aa16.21■□□□□ 0.19
GCDH-213ENST00000590627 TBC1D25Q3MII6 688 aa16.21■□□□□ 0.19
GCDH-213ENST00000590627 HSP90B2PQ58FF3 399 aa16.21■□□□□ 0.19
GCDH-213ENST00000590627 ACSBG2Q5FVE4 666 aa16.21■□□□□ 0.19
GCDH-213ENST00000590627 NEK10Q6ZWH5 1172 aa16.21■□□□□ 0.19
GCDH-213ENST00000590627 TBC1D1Q86TI0 1168 aaPredicted RBP16.21■□□□□ 0.19
GCDH-213ENST00000590627 CPNE9Q8IYJ1 553 aa16.21■□□□□ 0.19
GCDH-213ENST00000590627 CFAP206Q8IYR0 622 aa16.21■□□□□ 0.19
GCDH-213ENST00000590627 PHACTR4Q8IZ21 702 aa16.21■□□□□ 0.19
GCDH-213ENST00000590627 CENPLQ8N0S6 344 aaPredicted RBP16.21■□□□□ 0.19
GCDH-213ENST00000590627 C4orf33Q8N1A6 199 aa16.21■□□□□ 0.19
GCDH-213ENST00000590627 BANPQ8N9N5 519 aa16.21■□□□□ 0.19
GCDH-213ENST00000590627 FAM181AQ8N9Y4 354 aa16.21■□□□□ 0.19
GCDH-213ENST00000590627 ANKRD49Q8WVL7 239 aa16.21■□□□□ 0.19
GCDH-213ENST00000590627 DUSP23Q9BVJ7 150 aa16.21■□□□□ 0.19
GCDH-213ENST00000590627 DERL2Q9GZP9 239 aa16.21■□□□□ 0.19
GCDH-213ENST00000590627 VPS11Q9H270 941 aa16.21■□□□□ 0.19
GCDH-213ENST00000590627 DPEP2Q9H4A9 486 aa16.21■□□□□ 0.19
GCDH-213ENST00000590627 IGSF5Q9NSI5 407 aa16.21■□□□□ 0.19
GCDH-213ENST00000590627 DCDC2Q9UHG0 476 aa16.21■□□□□ 0.19
GCDH-213ENST00000590627 ACSL5Q9ULC5 683 aa16.21■□□□□ 0.19
GCDH-213ENST00000590627 KALRNO60229 2985 aa16.21■□□□□ 0.19
GCDH-213ENST00000590627 CCDC189A1A4V9 331 aa16.2■□□□□ 0.18
GCDH-213ENST00000590627 SCAMP1O15126 338 aa16.2■□□□□ 0.18
GCDH-213ENST00000590627 ATXN7O15265 892 aaPredicted RBP16.2■□□□□ 0.18
GCDH-213ENST00000590627 FFAR2O15552 330 aa16.2■□□□□ 0.18
GCDH-213ENST00000590627 KLHL2O95198 593 aa16.2■□□□□ 0.18
GCDH-213ENST00000590627 LTA4HP09960 611 aaKnown RBP16.2■□□□□ 0.18
GCDH-213ENST00000590627 CCDC166P0CW27 439 aa16.2■□□□□ 0.18
GCDH-213ENST00000590627 PBLDP30039 288 aaPredicted RBP16.2■□□□□ 0.18
GCDH-213ENST00000590627 CRHR1P34998 444 aa16.2■□□□□ 0.18
GCDH-213ENST00000590627 CCT5P48643 541 aa16.2■□□□□ 0.18
GCDH-213ENST00000590627 DUSP3P51452 185 aaPredicted RBP16.2■□□□□ 0.18
GCDH-213ENST00000590627 HSPA14Q0VDF9 509 aa16.2■□□□□ 0.18
GCDH-213ENST00000590627 DLG1Q12959 904 aa16.2■□□□□ 0.18
GCDH-213ENST00000590627 BOP1Q14137 746 aaKnown RBP16.2■□□□□ 0.18
GCDH-213ENST00000590627 NFE2L1Q14494 772 aa16.2■□□□□ 0.18
GCDH-213ENST00000590627 PLA2G4EQ3MJ16 856 aa16.2■□□□□ 0.18
GCDH-213ENST00000590627 CDCP2Q5VXM1 449 aa16.2■□□□□ 0.18
GCDH-213ENST00000590627 NAPRTQ6XQN6 538 aa16.2■□□□□ 0.18
GCDH-213ENST00000590627 CYHR1Q6ZMK1 362 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms