RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 NDUFS1P28331 727 aa12.28□□□□□ -0.44
RFX1-207ENST00000589937 PRDX3P30048 256 aaKnown RBP12.28□□□□□ -0.44
RFX1-207ENST00000589937 PEBP1P30086 187 aaKnown RBP12.28□□□□□ -0.44
RFX1-207ENST00000589937 FOXL2P58012 376 aa12.28□□□□□ -0.44
RFX1-207ENST00000589937 ZIC1Q15915 447 aa12.28□□□□□ -0.44
RFX1-207ENST00000589937 PTCHD3Q3KNS1 767 aa12.28□□□□□ -0.44
RFX1-207ENST00000589937 CRTC2Q53ET0 693 aaPredicted RBP12.28□□□□□ -0.44
RFX1-207ENST00000589937 TSTD2Q5T7W7 516 aa12.28□□□□□ -0.44
RFX1-207ENST00000589937 FAM198BQ6UWH4 519 aa12.28□□□□□ -0.44
RFX1-207ENST00000589937 PPP1R21Q6ZMI0 780 aa12.28□□□□□ -0.44
RFX1-207ENST00000589937 CDHR3Q6ZTQ4 885 aa12.28□□□□□ -0.44
RFX1-207ENST00000589937 VRK3Q8IV63 474 aa12.28□□□□□ -0.44
RFX1-207ENST00000589937 SPNS2Q8IVW8 549 aa12.28□□□□□ -0.44
RFX1-207ENST00000589937 FAM20CQ8IXL6 584 aa12.28□□□□□ -0.44
RFX1-207ENST00000589937 DNAAF3Q8N9W5 541 aa12.28□□□□□ -0.44
RFX1-207ENST00000589937 TFGQ92734 400 aaPredicted RBP12.28□□□□□ -0.44
RFX1-207ENST00000589937 MR1Q95460 341 aa12.28□□□□□ -0.44
RFX1-207ENST00000589937 C19orf43Q9BQ61 176 aa12.28□□□□□ -0.44
RFX1-207ENST00000589937 PITPNM3Q9BZ71 974 aa12.28□□□□□ -0.44
RFX1-207ENST00000589937 RAB6BQ9NRW1 208 aa12.28□□□□□ -0.44
RFX1-207ENST00000589937 ACTR10Q9NZ32 417 aa12.28□□□□□ -0.44
RFX1-207ENST00000589937 TLK1Q9UKI8 766 aa12.28□□□□□ -0.44
RFX1-207ENST00000589937 MAN2B2Q9Y2E5 1009 aa12.28□□□□□ -0.44
RFX1-207ENST00000589937 UTP20O75691 2785 aaKnown RBP12.27□□□□□ -0.44
RFX1-207ENST00000589937 IQCF5A8MTL0 148 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 C21orf140B9A014 251 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 IFRD1O00458 451 aaPredicted RBP12.27□□□□□ -0.45
RFX1-207ENST00000589937 UGT2B7P16662 529 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 ACADLP28330 430 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 PTPN4P29074 926 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 RORAP35398 523 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 PMS2P54278 862 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 CDH17Q12864 832 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 PRKAA1Q13131 559 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 SEMA5AQ13591 1074 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 SYTL3Q4VX76 610 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 PLEKHS1Q5SXH7 462 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 SPESP1Q6UW49 350 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 PACS1Q6VY07 963 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 AMIGO1Q86WK6 493 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 ENDOVQ8N8Q3 282 aaKnown RBP12.27□□□□□ -0.45
RFX1-207ENST00000589937 FLVCR1-AS1Q8TAF5 88 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 HEXDCQ8WVB3 486 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 ZFPM2Q8WW38 1151 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 LRRC45Q96CN5 670 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 TRAPPC9Q96Q05 1148 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 MVB12BQ9H7P6 319 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 VPS37BQ9H9H4 285 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 FAM60AQ9NP50 221 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 CASS4Q9NQ75 786 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 C1GALT1Q9NS00 363 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 KCND1Q9NSA2 647 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 PCMTD2Q9NV79 361 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 KCND3Q9UK17 655 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 ZNF148Q9UQR1 794 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 TDRKHQ9Y2W6 561 aaKnown RBP12.27□□□□□ -0.45
RFX1-207ENST00000589937 TCAF1Q9Y4C2 921 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 PCDHB3Q9Y5E6 796 aa12.27□□□□□ -0.45
RFX1-207ENST00000589937 USP9XQ93008 2570 aaPredicted RBP12.26□□□□□ -0.45
RFX1-207ENST00000589937 PRRC2CQ9Y520 2896 aaKnown RBP12.26□□□□□ -0.45
RFX1-207ENST00000589937 SLC5A10A0PJK1 596 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 ARGFXA6NJG6 315 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 RFPL1O75677 317 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 SUN1O94901 812 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 AP2A2O94973 939 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 MT-ND3P03897 115 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 CAPN1P07384 714 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 APRTP07741 180 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 RPL22P35268 128 aaKnown RBP12.26□□□□□ -0.45
RFX1-207ENST00000589937 CASRP41180 1078 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 NSG1P42857 185 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 PTGIRP43119 386 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 CD151P48509 253 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 TERF1P54274 439 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 RPA4Q13156 261 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 ITIH4Q14624 930 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 UGT8Q16880 541 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 TMTC4Q5T4D3 741 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 MEI1Q5TIA1 1274 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 CYB5D1Q6P9G0 228 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 AFTPHQ6ULP2 937 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 ZNF517Q6ZMY9 492 aaPredicted RBP12.26□□□□□ -0.45
RFX1-207ENST00000589937 UNC5AQ6ZN44 842 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 TAX1BP1Q86VP1 789 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 DSELQ8IZU8 1212 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 KRT222Q8N1A0 295 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 CLIP3Q96DZ5 547 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 IL17FQ96PD4 163 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 OR2A14Q96R47 310 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 TFB2MQ9H5Q4 396 aaKnown RBP12.26□□□□□ -0.45
RFX1-207ENST00000589937 LZTFL1Q9NQ48 299 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 LATS2Q9NRM7 1088 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 RUVBL2Q9Y230 463 aaKnown RBP12.26□□□□□ -0.45
RFX1-207ENST00000589937 PLAAQ9Y263 795 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 ASF1AQ9Y294 204 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 KLHL20Q9Y2M5 609 aa12.26□□□□□ -0.45
RFX1-207ENST00000589937 DOCK10Q96BY6 2186 aa12.25□□□□□ -0.45
RFX1-207ENST00000589937 HEATR9A2RTY3 570 aa12.25□□□□□ -0.45
RFX1-207ENST00000589937 C2orf74A8MZ97 194 aa12.25□□□□□ -0.45
RFX1-207ENST00000589937 E7EVH7 732 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms