RNA–Protein interactions for RNA: ENST00000589201.1

LINC00654-202, long intergenic non-protein coding RNA 654, humanhuman

TSL 3 BASIC

Gene LINC00654, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-202ENST00000589201 TBC1D21Q8IYX1 336 aa19.3■□□□□ 0.68
LINC00654-202ENST00000589201 UBXN4Q92575 508 aa19.3■□□□□ 0.68
LINC00654-202ENST00000589201 PPM1MQ96MI6 270 aa19.3■□□□□ 0.68
LINC00654-202ENST00000589201 PWWP2AQ96N64 755 aa19.3■□□□□ 0.68
LINC00654-202ENST00000589201 CD180Q99467 661 aa19.3■□□□□ 0.68
LINC00654-202ENST00000589201 TRIM31Q9BZY9 425 aa19.3■□□□□ 0.68
LINC00654-202ENST00000589201 TRIT1Q9H3H1 467 aaKnown RBP19.3■□□□□ 0.68
LINC00654-202ENST00000589201 CPNE5Q9HCH3 593 aa19.3■□□□□ 0.68
LINC00654-202ENST00000589201 C20orf96Q9NUD7 363 aaPredicted RBP19.3■□□□□ 0.68
LINC00654-202ENST00000589201 TDRKHQ9Y2W6 561 aaKnown RBP19.3■□□□□ 0.68
LINC00654-202ENST00000589201 PCDHB11Q9Y5F2 797 aa19.3■□□□□ 0.68
LINC00654-202ENST00000589201 FAM169AQ9Y6X4 670 aa19.3■□□□□ 0.68
LINC00654-202ENST00000589201 TLCD2A6NGC4 264 aa19.29■□□□□ 0.68
LINC00654-202ENST00000589201 STMND1H3BQB6 276 aa19.29■□□□□ 0.68
LINC00654-202ENST00000589201 BTN3A1O00481 513 aa19.29■□□□□ 0.68
LINC00654-202ENST00000589201 SLCO2B1O94956 709 aa19.29■□□□□ 0.68
LINC00654-202ENST00000589201 S1PR4O95977 384 aa19.29■□□□□ 0.68
LINC00654-202ENST00000589201 ESR1P03372 595 aa19.29■□□□□ 0.68
LINC00654-202ENST00000589201 TPBGLP0DKB5 382 aa19.29■□□□□ 0.68
LINC00654-202ENST00000589201 ADARP55265 1226 aaKnown RBP19.29■□□□□ 0.68
LINC00654-202ENST00000589201 CXADRP78310 365 aa19.29■□□□□ 0.68
LINC00654-202ENST00000589201 PRKAA1Q13131 559 aa19.29■□□□□ 0.68
LINC00654-202ENST00000589201 CTBP1Q13363 440 aa19.29■□□□□ 0.68
LINC00654-202ENST00000589201 BBS9Q3SYG4 887 aa19.29■□□□□ 0.68
LINC00654-202ENST00000589201 HIBCHQ6NVY1 386 aaPredicted RBP19.29■□□□□ 0.68
LINC00654-202ENST00000589201 FBXO38Q6PIJ6 1188 aa19.29■□□□□ 0.68
LINC00654-202ENST00000589201 IGDCC3Q8IVU1 814 aa19.29■□□□□ 0.68
LINC00654-202ENST00000589201 DENND6AQ8IWF6 608 aa19.29■□□□□ 0.68
LINC00654-202ENST00000589201 UNC5BQ8IZJ1 945 aa19.29■□□□□ 0.68
LINC00654-202ENST00000589201 SPATA4Q8NEY3 305 aa19.29■□□□□ 0.68
LINC00654-202ENST00000589201 OR5K2Q8NHB8 316 aa19.29■□□□□ 0.68
LINC00654-202ENST00000589201 CFAP61Q8NHU2 1237 aa19.29■□□□□ 0.68
LINC00654-202ENST00000589201 SLC41A2Q96JW4 573 aa19.29■□□□□ 0.68
LINC00654-202ENST00000589201 TEFMQ96QE5 360 aaKnown RBP19.29■□□□□ 0.68
LINC00654-202ENST00000589201 OR6C1Q96RD1 312 aa19.29■□□□□ 0.68
LINC00654-202ENST00000589201 EBNA1BP2Q99848 306 aaKnown RBP19.29■□□□□ 0.68
LINC00654-202ENST00000589201 POLG2Q9UHN1 485 aa19.29■□□□□ 0.68
LINC00654-202ENST00000589201 ICKQ9UPZ9 632 aa19.29■□□□□ 0.68
LINC00654-202ENST00000589201 ZFYVE26Q68DK2 2539 aa19.28■□□□□ 0.68
LINC00654-202ENST00000589201 GSAPA4D1B5 854 aa19.28■□□□□ 0.68
LINC00654-202ENST00000589201 KPNA5O15131 536 aa19.28■□□□□ 0.68
LINC00654-202ENST00000589201 EFSO43281 561 aa19.28■□□□□ 0.68
LINC00654-202ENST00000589201 NIPSNAP2O75323 286 aa19.28■□□□□ 0.68
LINC00654-202ENST00000589201 PGAM1P18669 254 aa19.28■□□□□ 0.68
LINC00654-202ENST00000589201 PRDX3P30048 256 aaKnown RBP19.28■□□□□ 0.68
LINC00654-202ENST00000589201 ITGA8P53708 1063 aa19.28■□□□□ 0.68
LINC00654-202ENST00000589201 UCNP55089 124 aa19.28■□□□□ 0.68
LINC00654-202ENST00000589201 TMPRSS3P57727 454 aa19.28■□□□□ 0.68
LINC00654-202ENST00000589201 SRSF6Q13247 344 aaKnown RBP19.28■□□□□ 0.68
LINC00654-202ENST00000589201 KCNAB1Q14722 419 aa19.28■□□□□ 0.68
LINC00654-202ENST00000589201 TMED2Q15363 201 aa19.28■□□□□ 0.68
LINC00654-202ENST00000589201 HSP90AA5PQ58FG0 334 aa19.28■□□□□ 0.68
LINC00654-202ENST00000589201 DNAJC21Q5F1R6 531 aaKnown RBP19.28■□□□□ 0.68
LINC00654-202ENST00000589201 OTOAQ7RTW8 1153 aa19.28■□□□□ 0.68
LINC00654-202ENST00000589201 ADGRF3Q8IZF5 1079 aa19.28■□□□□ 0.68
LINC00654-202ENST00000589201 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.28■□□□□ 0.68
LINC00654-202ENST00000589201 FAM136AQ96C01 138 aa19.28■□□□□ 0.68
LINC00654-202ENST00000589201 SNF8Q96H20 258 aa19.28■□□□□ 0.68
LINC00654-202ENST00000589201 CCNL2Q96S94 520 aaPredicted RBP19.28■□□□□ 0.68
LINC00654-202ENST00000589201 ZPBPQ9BS86 351 aa19.28■□□□□ 0.68
LINC00654-202ENST00000589201 SPRY4Q9C004 299 aa19.28■□□□□ 0.68
LINC00654-202ENST00000589201 FBXO6Q9NRD1 293 aaPredicted RBP19.28■□□□□ 0.68
LINC00654-202ENST00000589201 INTS10Q9NVR2 710 aaKnown RBP19.28■□□□□ 0.68
LINC00654-202ENST00000589201 GALPQ9UBC7 116 aa19.28■□□□□ 0.68
LINC00654-202ENST00000589201 POMT2Q9UKY4 750 aa19.28■□□□□ 0.68
LINC00654-202ENST00000589201 PLAGL1Q9UM63 463 aa19.28■□□□□ 0.68
LINC00654-202ENST00000589201 EFCAB8A8MWE9 144 aa19.27■□□□□ 0.68
LINC00654-202ENST00000589201 H3BMM5 538 aa19.27■□□□□ 0.68
LINC00654-202ENST00000589201 TP73O15350 636 aa19.27■□□□□ 0.68
LINC00654-202ENST00000589201 SEC31AO94979 1220 aaKnown RBP19.27■□□□□ 0.68
LINC00654-202ENST00000589201 PKMP14618 531 aaKnown RBP19.27■□□□□ 0.68
LINC00654-202ENST00000589201 FOLR1P15328 257 aa19.27■□□□□ 0.68
LINC00654-202ENST00000589201 CHRM3P20309 590 aa19.27■□□□□ 0.68
LINC00654-202ENST00000589201 SLC1A2P43004 574 aa19.27■□□□□ 0.68
LINC00654-202ENST00000589201 IL11RAQ14626 422 aa19.27■□□□□ 0.68
LINC00654-202ENST00000589201 CRYMQ14894 314 aa19.27■□□□□ 0.68
LINC00654-202ENST00000589201 HP1BP3Q5SSJ5 553 aaPredicted RBP19.27■□□□□ 0.68
LINC00654-202ENST00000589201 UNC5AQ6ZN44 842 aa19.27■□□□□ 0.68
LINC00654-202ENST00000589201 PDIK1LQ8N165 341 aa19.27■□□□□ 0.68
LINC00654-202ENST00000589201 SIDT2Q8NBJ9 832 aaKnown RBP19.27■□□□□ 0.68
LINC00654-202ENST00000589201 NKD1Q969G9 470 aa19.27■□□□□ 0.68
LINC00654-202ENST00000589201 RNF31Q96EP0 1072 aa19.27■□□□□ 0.68
LINC00654-202ENST00000589201 ELMO2Q96JJ3 720 aa19.27■□□□□ 0.68
LINC00654-202ENST00000589201 PILRAQ9UKJ1 303 aa19.27■□□□□ 0.68
LINC00654-202ENST00000589201 VPS9D1Q9Y2B5 631 aa19.27■□□□□ 0.68
LINC00654-202ENST00000589201 SNX24Q9Y343 169 aa19.27■□□□□ 0.68
LINC00654-202ENST00000589201 LOC400499M0QZD8 3231 aa19.27■□□□□ 0.68
LINC00654-202ENST00000589201 MGAQ8IWI9 3026 aa19.26■□□□□ 0.67
LINC00654-202ENST00000589201 SMAPO00193 183 aa19.26■□□□□ 0.67
LINC00654-202ENST00000589201 MATN2O00339 956 aa19.26■□□□□ 0.67
LINC00654-202ENST00000589201 ERVK-10P10266 1014 aa19.26■□□□□ 0.67
LINC00654-202ENST00000589201 SHMT2P34897 504 aa19.26■□□□□ 0.67
LINC00654-202ENST00000589201 RPL21P46778 160 aaKnown RBP19.26■□□□□ 0.67
LINC00654-202ENST00000589201 ARL4DP49703 201 aa19.26■□□□□ 0.67
LINC00654-202ENST00000589201 HSD11B2P80365 405 aa19.26■□□□□ 0.67
LINC00654-202ENST00000589201 C2orf54Q08AI8 447 aa19.26■□□□□ 0.67
LINC00654-202ENST00000589201 MANEAQ5SRI9 462 aa19.26■□□□□ 0.67
LINC00654-202ENST00000589201 PLEKHS1Q5SXH7 462 aa19.26■□□□□ 0.67
LINC00654-202ENST00000589201 ARHGAP40Q5TG30 622 aa19.26■□□□□ 0.67
LINC00654-202ENST00000589201 CCDC81Q6ZN84 652 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms