RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.37□□□□□ -0.11
CCDC43-203ENST00000588210 MAP10Q9P2G4 905 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 MYRFQ9Y2G1 1151 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 FCF1Q9Y324 198 aaKnown RBP14.37□□□□□ -0.11
CCDC43-203ENST00000588210 ACTL7AQ9Y615 435 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 CCDC162PA2VCL2 907 aa14.36□□□□□ -0.11
CCDC43-203ENST00000588210 UBXN8O00124 270 aa14.36□□□□□ -0.11
CCDC43-203ENST00000588210 FXYD1O00168 92 aa14.36□□□□□ -0.11
CCDC43-203ENST00000588210 PIP5K1BO14986 540 aa14.36□□□□□ -0.11
CCDC43-203ENST00000588210 ZNF821O75541 412 aaPredicted RBP14.36□□□□□ -0.11
CCDC43-203ENST00000588210 ACADMP11310 421 aa14.36□□□□□ -0.11
CCDC43-203ENST00000588210 MTHFD2P13995 350 aa14.36□□□□□ -0.11
CCDC43-203ENST00000588210 CDH2P19022 906 aaPredicted RBP14.36□□□□□ -0.11
CCDC43-203ENST00000588210 CAPN3P20807 821 aa14.36□□□□□ -0.11
CCDC43-203ENST00000588210 GRIA3P42263 894 aa14.36□□□□□ -0.11
CCDC43-203ENST00000588210 RECQLP46063 649 aaPredicted RBP14.36□□□□□ -0.11
CCDC43-203ENST00000588210 TUBA4AP68366 448 aa14.36□□□□□ -0.11
CCDC43-203ENST00000588210 SEMA3AQ14563 771 aa14.36□□□□□ -0.11
CCDC43-203ENST00000588210 CYTH1Q15438 398 aa14.36□□□□□ -0.11
CCDC43-203ENST00000588210 NHSL2Q5HYW2 709 aa14.36□□□□□ -0.11
CCDC43-203ENST00000588210 ZNF776Q68DI1 518 aaPredicted RBP14.36□□□□□ -0.11
CCDC43-203ENST00000588210 LCN8Q6JVE9 175 aa14.36□□□□□ -0.11
CCDC43-203ENST00000588210 KIAA1324Q6UXG2 1013 aaKnown RBP14.36□□□□□ -0.11
CCDC43-203ENST00000588210 DSG4Q86SJ6 1040 aa14.36□□□□□ -0.11
CCDC43-203ENST00000588210 MYO1HQ8N1T3 1032 aa14.36□□□□□ -0.11
CCDC43-203ENST00000588210 STK40Q8N2I9 435 aa14.36□□□□□ -0.11
CCDC43-203ENST00000588210 MFSD2AQ8NA29 543 aa14.36□□□□□ -0.11
CCDC43-203ENST00000588210 OR2A12Q8NGT7 310 aa14.36□□□□□ -0.11
CCDC43-203ENST00000588210 HM13Q8TCT9 377 aa14.36□□□□□ -0.11
CCDC43-203ENST00000588210 DNAJC1Q96KC8 554 aaKnown RBP14.36□□□□□ -0.11
CCDC43-203ENST00000588210 FAM129BQ96TA1 746 aa14.36□□□□□ -0.11
CCDC43-203ENST00000588210 CCT7Q99832 543 aa14.36□□□□□ -0.11
CCDC43-203ENST00000588210 SLC6A17Q9H1V8 727 aa14.36□□□□□ -0.11
CCDC43-203ENST00000588210 UBA2Q9UBT2 640 aaPredicted RBP14.36□□□□□ -0.11
CCDC43-203ENST00000588210 SCML1Q9UN30 329 aa14.36□□□□□ -0.11
CCDC43-203ENST00000588210 ZFC3H1O60293 1989 aaKnown RBP14.36□□□□□ -0.11
CCDC43-203ENST00000588210 TTC24A2A3L6 582 aaPredicted RBP14.35□□□□□ -0.11
CCDC43-203ENST00000588210 ANGPT2O15123 496 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 SIX3O95343 332 aaPredicted RBP14.35□□□□□ -0.11
CCDC43-203ENST00000588210 EPOP01588 193 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 DNTTP04053 509 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 RPS14P62263 151 aaKnown RBP14.35□□□□□ -0.11
CCDC43-203ENST00000588210 INPP5AQ14642 412 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 TYSND1Q2T9J0 566 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 INTS11Q5TA45 600 aaKnown RBP14.35□□□□□ -0.11
CCDC43-203ENST00000588210 KRT80Q6KB66 452 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 ZBTB49Q6ZSB9 765 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 CANT1Q8WVQ1 401 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 GAB3Q8WWW8 586 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 OR8D1Q8WZ84 308 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 PPWD1Q96BP3 646 aaKnown RBP14.35□□□□□ -0.11
CCDC43-203ENST00000588210 RMND5BQ96G75 393 aaPredicted RBP14.35□□□□□ -0.11
CCDC43-203ENST00000588210 ZNF599Q96NL3 588 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 SEMA3CQ99985 751 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 AARSD1Q9BTE6 412 aaKnown RBP14.35□□□□□ -0.11
CCDC43-203ENST00000588210 POLR1EQ9GZS1 481 aaKnown RBP14.35□□□□□ -0.11
CCDC43-203ENST00000588210 OCEL1Q9H607 264 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 TIMMDC1Q9NPL8 285 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 ITM2CQ9NQX7 267 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 SDR39U1Q9NRG7 319 aaPredicted RBP14.35□□□□□ -0.11
CCDC43-203ENST00000588210 CATSPERZQ9NTU4 200 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 GMPR2Q9P2T1 348 aaKnown RBP14.35□□□□□ -0.11
CCDC43-203ENST00000588210 RAPGEFL1Q9UHV5 662 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 FANCMQ8IYD8 2048 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 CROCCQ5TZA2 2017 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 SOCS2O14508 198 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 HNRNPRO43390 633 aaKnown RBP14.35□□□□□ -0.11
CCDC43-203ENST00000588210 AKAP10O43572 662 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 HRO43593 1189 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 VPS4BO75351 444 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 LBPP18428 481 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 P2RY2P41231 377 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 NBL1P41271 181 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 MRPL19P49406 292 aaKnown RBP14.35□□□□□ -0.11
CCDC43-203ENST00000588210 STC1P52823 247 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 FOXA1P55317 472 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 GRB7Q14451 532 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 CARD16Q5EG05 197 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 C11orf74Q86VG3 221 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 SLC15A3Q8IY34 581 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 TRPC4APQ8TEL6 797 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 SPACA7Q96KW9 195 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 TNKS2Q9H2K2 1166 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 OLAHQ9NV23 265 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 INTS10Q9NVR2 710 aaKnown RBP14.35□□□□□ -0.11
CCDC43-203ENST00000588210 GID8Q9NWU2 228 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 USP36Q9P275 1121 aaKnown RBP14.35□□□□□ -0.11
CCDC43-203ENST00000588210 POLG2Q9UHN1 485 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 PTGDR2Q9Y5Y4 395 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 R4GN57 208 aa14.35□□□□□ -0.11
CCDC43-203ENST00000588210 DHRS12A0PJE2 317 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 H3BMM5 538 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 BNIP3LO60238 219 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 KERAO60938 352 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 CKMT2P17540 419 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 SLC5A2P31639 672 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 SNRPD1P62314 119 aaKnown RBP14.34□□□□□ -0.11
CCDC43-203ENST00000588210 SFSWAPQ12872 951 aaKnown RBP14.34□□□□□ -0.11
CCDC43-203ENST00000588210 LCP2Q13094 533 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 PFKFB4Q16877 469 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms