RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 HLA-BQ31612 363 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 PYCR3Q53H96 274 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 C11orf96Q7Z7L8 435 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 PARGQ86W56 976 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 CRLF3Q8IUI8 442 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 PHACTR4Q8IZ21 702 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 TCAIMQ8N3R3 496 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 OR6Y1Q8NGX8 325 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 ZBTB9Q96C00 473 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 CCT8L2Q96SF2 557 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 ELF4Q99607 663 aaPredicted RBP12.38□□□□□ -0.43
VMP1-202ENST00000585847 NUSAP1Q9BXS6 441 aaKnown RBP12.38□□□□□ -0.43
VMP1-202ENST00000585847 OR2AG1Q9H205 316 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 RDH14Q9HBH5 336 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 EML4Q9HC35 981 aaKnown RBP12.38□□□□□ -0.43
VMP1-202ENST00000585847 TM7SF3Q9NS93 570 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 NUDT4Q9NZJ9 180 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.38□□□□□ -0.43
VMP1-202ENST00000585847 KLQ9UEF7 1012 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 SUFUQ9UMX1 484 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 DGKBQ9Y6T7 804 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 BPTFQ12830 3046 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 ASCC3Q8N3C0 2202 aaKnown RBP12.38□□□□□ -0.43
VMP1-202ENST00000585847 ZFHX4Q86UP3 3567 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 PRR19A6NJB7 356 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 FOXO6A8MYZ6 492 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 G3V2L1 256 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 NIPSNAP2O75323 286 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 PIAS2O75928 621 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 S100BP04271 92 aaPredicted RBP12.37□□□□□ -0.43
VMP1-202ENST00000585847 DRD4P21917 467 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 PIK3CGP48736 1102 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 HK3P52790 923 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 AP1S2P56377 157 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 CDKL1Q00532 357 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 IRF9Q00978 393 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 GBX1Q14549 363 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 CHI3L2Q15782 390 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 ZNF658BQ4V348 819 aaPredicted RBP12.37□□□□□ -0.43
VMP1-202ENST00000585847 STPG1Q5TH74 334 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 PAQR3Q6TCH7 311 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 ISCA2Q86U28 154 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 NRROSQ86YC3 692 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 SPNS2Q8IVW8 549 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 MINDY1Q8N5J2 469 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 ACVR1CQ8NER5 493 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 CCL4L1Q8NHW4 92 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 NXNL1Q96CM4 212 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 L3HYPDHQ96EM0 354 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 FAR2Q96K12 515 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 LRRC61Q9BV99 259 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 C1QTNF3Q9BXJ4 246 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 TRIM54Q9BYV2 358 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 TRIM55Q9BYV6 548 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 ZDHHC5Q9C0B5 715 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 GAREM1Q9H706 876 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 CYP4F12Q9HCS2 524 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 DNAJC28Q9NX36 388 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 KLHL14Q9P2G3 628 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 GULP1Q9UBP9 304 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 SLC23A2Q9UGH3 650 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 HAO1Q9UJM8 370 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 PRKAB1Q9Y478 270 aa12.37□□□□□ -0.43
VMP1-202ENST00000585847 KLK8O60259 260 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 CDK14O94921 469 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 TSPAN12O95859 305 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 SYPP08247 313 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 JUNDP17535 347 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 AOAHP28039 575 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 HTR1BP28222 390 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 HNMTP50135 292 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 TIAL1Q01085 375 aaKnown RBP eCLIP12.36□□□□□ -0.43
VMP1-202ENST00000585847 OCRLQ01968 901 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 PPARDQ03181 441 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 PRKAA1Q13131 559 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 SYTL3Q4VX76 610 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 CFAP157Q5JU67 520 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 FRA10AC1Q70Z53 315 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 SPATA21Q7Z572 469 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 PIGWQ7Z7B1 504 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 PIM3Q86V86 326 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 HID1Q8IV36 788 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 WDR75Q8IWA0 830 aaKnown RBP12.36□□□□□ -0.43
VMP1-202ENST00000585847 LRRC34Q8IZ02 419 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 CACNA2D3Q8IZS8 1091 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 PLD6Q8N2A8 252 aaKnown RBP12.36□□□□□ -0.43
VMP1-202ENST00000585847 SLC25A45Q8N413 288 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 TMEM151AQ8N4L1 468 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 OXR1Q8N573 874 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 GBP7Q8N8V2 638 aaPredicted RBP12.36□□□□□ -0.43
VMP1-202ENST00000585847 CCDC197Q8NCU1 140 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 LKAAEAR1Q8TD35 194 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 SAP25Q8TEE9 199 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 TMEM159Q96B96 161 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 SKA1Q96BD8 255 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 SGF29Q96ES7 293 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 LINGO1Q96FE5 620 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 CNDP1Q96KN2 507 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 MAGEB10Q96LZ2 347 aaPredicted RBP12.36□□□□□ -0.43
VMP1-202ENST00000585847 CCM2Q9BSQ5 444 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms