RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 NAPRTQ6XQN6 538 aa12.93□□□□□ -0.34
SREBF1-223ENST00000584760 TIPARPQ7Z3E1 657 aaKnown RBP12.93□□□□□ -0.34
SREBF1-223ENST00000584760 KMT5CQ86Y97 462 aa12.93□□□□□ -0.34
SREBF1-223ENST00000584760 CARFQ8N187 725 aa12.93□□□□□ -0.34
SREBF1-223ENST00000584760 NAT8LQ8N9F0 302 aa12.93□□□□□ -0.34
SREBF1-223ENST00000584760 MCUQ8NE86 351 aa12.93□□□□□ -0.34
SREBF1-223ENST00000584760 OR52E1Q8NGJ3 308 aa12.93□□□□□ -0.34
SREBF1-223ENST00000584760 TFGQ92734 400 aaPredicted RBP12.93□□□□□ -0.34
SREBF1-223ENST00000584760 SERPINB12Q96P63 405 aa12.93□□□□□ -0.34
SREBF1-223ENST00000584760 OR6C1Q96RD1 312 aa12.93□□□□□ -0.34
SREBF1-223ENST00000584760 NRTNQ99748 197 aa12.93□□□□□ -0.34
SREBF1-223ENST00000584760 TRIM56Q9BRZ2 755 aaKnown RBP12.93□□□□□ -0.34
SREBF1-223ENST00000584760 P2RY12Q9H244 342 aa12.93□□□□□ -0.34
SREBF1-223ENST00000584760 TFB2MQ9H5Q4 396 aaKnown RBP12.93□□□□□ -0.34
SREBF1-223ENST00000584760 ANAPC5Q9UJX4 755 aa12.93□□□□□ -0.34
SREBF1-223ENST00000584760 POMT2Q9UKY4 750 aa12.93□□□□□ -0.34
SREBF1-223ENST00000584760 CDYLQ9Y232 598 aa12.93□□□□□ -0.34
SREBF1-223ENST00000584760 IQCF5A8MTL0 148 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 FANCGO15287 622 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 VAPBO95292 243 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 FGF5P12034 268 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 GP1BBP13224 206 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 LIFP15018 202 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 ZNF28P17035 718 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 POLR2CP19387 275 aaPredicted RBP12.92□□□□□ -0.34
SREBF1-223ENST00000584760 CCR7P32248 378 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 KCNAB1Q14722 419 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 IGFBP7Q16270 282 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 TYSND1Q2T9J0 566 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 PAPD7Q5XG87 772 aaKnown RBP12.92□□□□□ -0.34
SREBF1-223ENST00000584760 VRK3Q8IV63 474 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 SLC22A15Q8IZD6 547 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 CACNA2D3Q8IZS8 1091 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 NLGN4XQ8N0W4 816 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 KRT222Q8N1A0 295 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 AGGF1Q8N302 714 aaeCLIP12.92□□□□□ -0.34
SREBF1-223ENST00000584760 IL22RA1Q8N6P7 574 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 PHC3Q8NDX5 983 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 NLGN4YQ8NFZ3 816 aaPredicted RBP12.92□□□□□ -0.34
SREBF1-223ENST00000584760 OR4E2Q8NGC2 313 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 OR5AR1Q8NGP9 310 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 GRK7Q8WTQ7 553 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 LCN9Q8WX39 176 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 SLCO2A1Q92959 643 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 PPM1MQ96MI6 270 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 CARD6Q9BX69 1037 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 DDX47Q9H0S4 455 aaKnown RBP12.92□□□□□ -0.34
SREBF1-223ENST00000584760 EPN3Q9H201 632 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 SRMSQ9H3Y6 488 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 XAB2Q9HCS7 855 aaKnown RBP12.92□□□□□ -0.34
SREBF1-223ENST00000584760 ICKQ9UPZ9 632 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 BOD1L1Q8NFC6 3051 aa12.92□□□□□ -0.34
SREBF1-223ENST00000584760 SPTBP11277 2137 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 UBA6A0AVT1 1052 aaPredicted RBP12.91□□□□□ -0.34
SREBF1-223ENST00000584760 GOLGA8KD6RF30 607 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 GOLGA8TH3BQL2 631 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 GOLGA8MH3BSY2 632 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 MATN2O00339 956 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 BTN3A3O00478 584 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 BTN3A1O00481 513 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 GPC4O75487 556 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 EBLN1P0CF75 366 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 TPBGLP0DKB5 382 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 FOLR1P15328 257 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 RPS3P23396 243 aaKnown RBP eCLIP12.91□□□□□ -0.346e-7■■■■■ 36.2
SREBF1-223ENST00000584760 AOAHP28039 575 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 GNG11P61952 73 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 HSD11B2P80365 405 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 PRKG2Q13237 762 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 TUBB3Q13509 450 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 MAP7Q14244 749 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 ARMC6Q6NXE6 501 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 BORAQ6PGQ7 559 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 AMIGO1Q86WK6 493 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 LRRC6Q86X45 466 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 TBC1D21Q8IYX1 336 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 ADGRF3Q8IZF5 1079 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 D2HGDHQ8N465 521 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 SIDT2Q8NBJ9 832 aaKnown RBP12.91□□□□□ -0.34
SREBF1-223ENST00000584760 LPGAT1Q92604 370 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 TSSK1BQ9BXA7 367 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 SLC12A9Q9BXP2 914 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 PITPNM3Q9BZ71 974 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 ULBP3Q9BZM4 244 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 TWSG1Q9GZX9 223 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 ADNPQ9H2P0 1102 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 PCYOX1Q9UHG3 505 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 GNPTGQ9UJJ9 305 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 ASF1AQ9Y294 204 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 BTRCQ9Y297 605 aa12.91□□□□□ -0.34
SREBF1-223ENST00000584760 FAM237BA0A1B0GVD1 139 aa12.9□□□□□ -0.34
SREBF1-223ENST00000584760 GSAPA4D1B5 854 aa12.9□□□□□ -0.34
SREBF1-223ENST00000584760 NDUFS3O75489 264 aa12.9□□□□□ -0.34
SREBF1-223ENST00000584760 SLCO2B1O94956 709 aa12.9□□□□□ -0.34
SREBF1-223ENST00000584760 TIAF1O95411 115 aa12.9□□□□□ -0.34
SREBF1-223ENST00000584760 ZBTB11O95625 1053 aaPredicted RBP12.9□□□□□ -0.34
SREBF1-223ENST00000584760 OGNP20774 298 aaKnown RBP12.9□□□□□ -0.34
SREBF1-223ENST00000584760 MAP4P27816 1152 aaKnown RBP12.9□□□□□ -0.34
SREBF1-223ENST00000584760 SHMT2P34897 504 aa12.9□□□□□ -0.34
SREBF1-223ENST00000584760 STAT5AP42229 794 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms