RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 PCSK4Q6UW60 755 aa19.83■□□□□ 0.77
SS18-224ENST00000584083 C6orf15Q6UXA7 325 aaPredicted RBP19.83■□□□□ 0.77
SS18-224ENST00000584083 SDCCAG8Q86SQ7 713 aaPredicted RBP19.83■□□□□ 0.77
SS18-224ENST00000584083 CAND1Q86VP6 1230 aaKnown RBP19.83■□□□□ 0.77
SS18-224ENST00000584083 TBC1D21Q8IYX1 336 aa19.83■□□□□ 0.77
SS18-224ENST00000584083 UNC5BQ8IZJ1 945 aa19.83■□□□□ 0.77
SS18-224ENST00000584083 CARFQ8N187 725 aa19.83■□□□□ 0.77
SS18-224ENST00000584083 KRT222Q8N1A0 295 aa19.83■□□□□ 0.77
SS18-224ENST00000584083 GALNT6Q8NCL4 622 aa19.83■□□□□ 0.77
SS18-224ENST00000584083 LKAAEAR1Q8TD35 194 aa19.83■□□□□ 0.77
SS18-224ENST00000584083 ASZ1Q8WWH4 475 aa19.83■□□□□ 0.77
SS18-224ENST00000584083 WBP1Q96G27 269 aa19.83■□□□□ 0.77
SS18-224ENST00000584083 FGF21Q9NSA1 209 aa19.83■□□□□ 0.77
SS18-224ENST00000584083 POLG2Q9UHN1 485 aa19.83■□□□□ 0.77
SS18-224ENST00000584083 GNPTGQ9UJJ9 305 aa19.83■□□□□ 0.77
SS18-224ENST00000584083 LOC101059948A0A1B0GTJ6 334 aa19.82■□□□□ 0.76
SS18-224ENST00000584083 SLC9B1P1A6NJY1 282 aa19.82■□□□□ 0.76
SS18-224ENST00000584083 SDR42E2A6NKP2 422 aa19.82■□□□□ 0.76
SS18-224ENST00000584083 GOLGA8KD6RF30 607 aa19.82■□□□□ 0.76
SS18-224ENST00000584083 GOLGA8TH3BQL2 631 aa19.82■□□□□ 0.76
SS18-224ENST00000584083 MLNP12872 115 aa19.82■□□□□ 0.76
SS18-224ENST00000584083 PAMP19021 973 aa19.82■□□□□ 0.76
SS18-224ENST00000584083 PRDX3P30048 256 aaKnown RBP19.82■□□□□ 0.76
SS18-224ENST00000584083 SHMT2P34897 504 aa19.82■□□□□ 0.76
SS18-224ENST00000584083 EIF3BP55884 814 aaKnown RBP19.82■□□□□ 0.76
SS18-224ENST00000584083 GNG11P61952 73 aa19.82■□□□□ 0.76
SS18-224ENST00000584083 MAP7Q14244 749 aa19.82■□□□□ 0.76
SS18-224ENST00000584083 TMED2Q15363 201 aa19.82■□□□□ 0.76
SS18-224ENST00000584083 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.82■□□□□ 0.76
SS18-224ENST00000584083 BPHLQ86WA6 291 aaPredicted RBP19.82■□□□□ 0.76
SS18-224ENST00000584083 LRRC6Q86X45 466 aa19.82■□□□□ 0.76
SS18-224ENST00000584083 D2HGDHQ8N465 521 aa19.82■□□□□ 0.76
SS18-224ENST00000584083 MCUQ8NE86 351 aa19.82■□□□□ 0.76
SS18-224ENST00000584083 STAMBPL1Q96FJ0 436 aa19.82■□□□□ 0.76
SS18-224ENST00000584083 EFHD1Q9BUP0 239 aa19.82■□□□□ 0.76
SS18-224ENST00000584083 XAB2Q9HCS7 855 aaKnown RBP19.82■□□□□ 0.76
SS18-224ENST00000584083 C1GALT1Q9NS00 363 aa19.82■□□□□ 0.76
SS18-224ENST00000584083 ICKQ9UPZ9 632 aa19.82■□□□□ 0.76
SS18-224ENST00000584083 ATMQ13315 3056 aa19.82■□□□□ 0.76
SS18-224ENST00000584083 C2orf74A8MZ97 194 aa19.81■□□□□ 0.76
SS18-224ENST00000584083 PFDN6O15212 129 aa19.81■□□□□ 0.76
SS18-224ENST00000584083 MAP3K7O43318 606 aa19.81■□□□□ 0.76
SS18-224ENST00000584083 ARNTP27540 789 aa19.81■□□□□ 0.76
SS18-224ENST00000584083 GPR19Q15760 415 aa19.81■□□□□ 0.76
SS18-224ENST00000584083 DNAJC21Q5F1R6 531 aaKnown RBP19.81■□□□□ 0.76
SS18-224ENST00000584083 ARMC3Q5W041 872 aa19.81■□□□□ 0.76
SS18-224ENST00000584083 KIAA0930Q6ICG6 404 aaPredicted RBP19.81■□□□□ 0.76
SS18-224ENST00000584083 HOOK3Q86VS8 718 aa19.81■□□□□ 0.76
SS18-224ENST00000584083 VRK3Q8IV63 474 aa19.81■□□□□ 0.76
SS18-224ENST00000584083 SLC22A15Q8IZD6 547 aa19.81■□□□□ 0.76
SS18-224ENST00000584083 ADGRF3Q8IZF5 1079 aa19.81■□□□□ 0.76
SS18-224ENST00000584083 OR5K2Q8NHB8 316 aa19.81■□□□□ 0.76
SS18-224ENST00000584083 CFAP61Q8NHU2 1237 aa19.81■□□□□ 0.76
SS18-224ENST00000584083 GSDMBQ8TAX9 411 aa19.81■□□□□ 0.76
SS18-224ENST00000584083 PANX3Q96QZ0 392 aa19.81■□□□□ 0.76
SS18-224ENST00000584083 ARHGAP9Q9BRR9 750 aa19.81■□□□□ 0.76
SS18-224ENST00000584083 SLC12A9Q9BXP2 914 aa19.81■□□□□ 0.76
SS18-224ENST00000584083 P2RY12Q9H244 342 aa19.81■□□□□ 0.76
SS18-224ENST00000584083 ACTR10Q9NZ32 417 aa19.81■□□□□ 0.76
SS18-224ENST00000584083 RPS6KL1Q9Y6S9 549 aa19.81■□□□□ 0.76
SS18-224ENST00000584083 MAGEB16A2A368 324 aa19.8■□□□□ 0.76
SS18-224ENST00000584083 PIPSLA2A3N6 862 aa19.8■□□□□ 0.76
SS18-224ENST00000584083 ZNF891A8MT65 544 aaPredicted RBP19.8■□□□□ 0.76
SS18-224ENST00000584083 KDM1AO60341 852 aa19.8■□□□□ 0.76
SS18-224ENST00000584083 TIAF1O95411 115 aa19.8■□□□□ 0.76
SS18-224ENST00000584083 CCNYL3P0C7X3 344 aa19.8■□□□□ 0.76
SS18-224ENST00000584083 AOAHP28039 575 aa19.8■□□□□ 0.76
SS18-224ENST00000584083 STAT5AP42229 794 aa19.8■□□□□ 0.76
SS18-224ENST00000584083 ABRQ12979 859 aa19.8■□□□□ 0.76
SS18-224ENST00000584083 LY6DQ14210 128 aa19.8■□□□□ 0.76
SS18-224ENST00000584083 RNF187Q5TA31 235 aaPredicted RBP19.8■□□□□ 0.76
SS18-224ENST00000584083 PWWP2BQ6NUJ5 590 aa19.8■□□□□ 0.76
SS18-224ENST00000584083 UNC5AQ6ZN44 842 aa19.8■□□□□ 0.76
SS18-224ENST00000584083 EXTL1Q92935 676 aa19.8■□□□□ 0.76
SS18-224ENST00000584083 ZNF669Q96BR6 464 aaPredicted RBP19.8■□□□□ 0.76
SS18-224ENST00000584083 CAPZA3Q96KX2 299 aa19.8■□□□□ 0.76
SS18-224ENST00000584083 SERPINB12Q96P63 405 aa19.8■□□□□ 0.76
SS18-224ENST00000584083 FCRL4Q96PJ5 515 aa19.8■□□□□ 0.76
SS18-224ENST00000584083 TCF12Q99081 682 aa19.8■□□□□ 0.76
SS18-224ENST00000584083 TRIM56Q9BRZ2 755 aaKnown RBP19.8■□□□□ 0.76
SS18-224ENST00000584083 DDX47Q9H0S4 455 aaKnown RBP19.8■□□□□ 0.76
SS18-224ENST00000584083 PYCARDQ9ULZ3 195 aa19.8■□□□□ 0.76
SS18-224ENST00000584083 PLAGL1Q9UM63 463 aa19.8■□□□□ 0.76
SS18-224ENST00000584083 CDYLQ9Y232 598 aa19.8■□□□□ 0.76
SS18-224ENST00000584083 BTRCQ9Y297 605 aa19.8■□□□□ 0.76
SS18-224ENST00000584083 KPNA5O15131 536 aa19.79■□□□□ 0.76
SS18-224ENST00000584083 GPC4O75487 556 aa19.79■□□□□ 0.76
SS18-224ENST00000584083 MT-ND3P03897 115 aa19.79■□□□□ 0.76
SS18-224ENST00000584083 RPN2P04844 631 aa19.79■□□□□ 0.76
SS18-224ENST00000584083 ITGB2P05107 769 aa19.79■□□□□ 0.76
SS18-224ENST00000584083 RPS3P23396 243 aaKnown RBP eCLIP19.79■□□□□ 0.76
SS18-224ENST00000584083 FMO4P31512 558 aa19.79■□□□□ 0.76
SS18-224ENST00000584083 TUBB4BP68371 445 aa19.79■□□□□ 0.76
SS18-224ENST00000584083 TUBB2AQ13885 445 aa19.79■□□□□ 0.76
SS18-224ENST00000584083 DHX34Q14147 1143 aaKnown RBP19.79■□□□□ 0.76
SS18-224ENST00000584083 ANKRD20A4Q4UJ75 823 aa19.79■□□□□ 0.76
SS18-224ENST00000584083 NEPROQ6NW34 567 aa19.79■□□□□ 0.76
SS18-224ENST00000584083 OTOAQ7RTW8 1153 aa19.79■□□□□ 0.76
SS18-224ENST00000584083 PPIL6Q8IXY8 311 aa19.79■□□□□ 0.76
SS18-224ENST00000584083 SLC45A3Q96JT2 553 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms