RNA–Protein interactions for RNA: ENST00000581729.1

CTC1-209, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 3

Gene CTC1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-209ENST00000581729 IP6K3Q96PC2 410 aa3.97□□□□□ -1.77
CTC1-209ENST00000581729 CD180Q99467 661 aa3.97□□□□□ -1.77
CTC1-209ENST00000581729 TIMM29Q9BSF4 260 aa3.97□□□□□ -1.77
CTC1-209ENST00000581729 TRIM51Q9BSJ1 452 aa3.97□□□□□ -1.77
CTC1-209ENST00000581729 TDRD1Q9BXT4 1180 aaKnown RBP3.97□□□□□ -1.77
CTC1-209ENST00000581729 PITPNM3Q9BZ71 974 aa3.97□□□□□ -1.77
CTC1-209ENST00000581729 FAM83DQ9H4H8 585 aa3.97□□□□□ -1.77
CTC1-209ENST00000581729 CATSPERBQ9H7T0 1116 aa3.97□□□□□ -1.77
CTC1-209ENST00000581729 ZNF160Q9HCG1 818 aa3.97□□□□□ -1.77
CTC1-209ENST00000581729 IMP3Q9NV31 184 aaKnown RBP3.97□□□□□ -1.77
CTC1-209ENST00000581729 KCTD5Q9NXV2 234 aa3.97□□□□□ -1.77
CTC1-209ENST00000581729 IFT80Q9P2H3 777 aaPredicted RBP3.97□□□□□ -1.77
CTC1-209ENST00000581729 FAM8A1Q9UBU6 413 aa3.97□□□□□ -1.77
CTC1-209ENST00000581729 SLC24A2Q9UI40 661 aa3.97□□□□□ -1.77
CTC1-209ENST00000581729 NOCTQ9UK39 431 aaKnown RBP3.97□□□□□ -1.77
CTC1-209ENST00000581729 CTNND2Q9UQB3 1225 aa3.97□□□□□ -1.77
CTC1-209ENST00000581729 PADI2Q9Y2J8 665 aa3.97□□□□□ -1.77
CTC1-209ENST00000581729 L3MBTL1Q9Y468 752 aa3.97□□□□□ -1.77
CTC1-209ENST00000581729 ASB1Q9Y576 335 aa3.97□□□□□ -1.77
CTC1-209ENST00000581729 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.97□□□□□ -1.77
CTC1-209ENST00000581729 NBEAL2Q6ZNJ1 2754 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 TRAV17A0A0B4J275 112 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 A0A1W2PPR1 153 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 GSAPA4D1B5 854 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 NPIPA5E9PKD4 350 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 H7C1Q1 480 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 EEF2KO00418 725 aaKnown RBP3.96□□□□□ -1.78
CTC1-209ENST00000581729 FFAR3O14843 346 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 SMAD7O15105 426 aaKnown RBP3.96□□□□□ -1.78
CTC1-209ENST00000581729 KMOO15229 486 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 GPR42O15529 346 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 CDK14O94921 469 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 ZWINTO95229 277 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 SLC25A14O95258 325 aaPredicted RBP3.96□□□□□ -1.78
CTC1-209ENST00000581729 ATE1O95260 518 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 CYP1A1P04798 512 aaPredicted RBP3.96□□□□□ -1.78
CTC1-209ENST00000581729 MMP2P08253 660 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 HOXD4P09016 255 aaPredicted RBP3.96□□□□□ -1.78
CTC1-209ENST00000581729 MSL3P1P0C860 447 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 PRR35P0CG20 571 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 ZSCAN22P10073 491 aaPredicted RBP3.96□□□□□ -1.78
CTC1-209ENST00000581729 ITGAMP11215 1152 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 COX6A1P12074 109 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 HLA-DPA1P20036 260 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 AGXTP21549 392 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 GPD1P21695 349 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 MCM3P25205 808 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 PRDX3P30048 256 aaKnown RBP3.96□□□□□ -1.78
CTC1-209ENST00000581729 PTGER1P34995 402 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 EPHB1P54762 984 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 YBX1P67809 324 aaKnown RBP3.96□□□□□ -1.78
CTC1-209ENST00000581729 DCDP81605 110 aaKnown RBP3.96□□□□□ -1.78
CTC1-209ENST00000581729 CACNG1Q06432 222 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 KRTAP1-1Q07627 177 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 DMPKQ09013 629 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 CETN1Q12798 172 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 MYBPHQ13203 477 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 OLIG2Q13516 323 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 DPYSQ14117 519 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 RFTN1Q14699 578 aaPredicted RBP3.96□□□□□ -1.78
CTC1-209ENST00000581729 INAQ16352 499 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 DEFB113Q30KQ7 82 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 TUBB8Q3ZCM7 444 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 ATP13A5Q4VNC0 1218 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 ZNF569Q5MCW4 686 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 FCRLBQ6BAA4 426 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 HIBCHQ6NVY1 386 aaPredicted RBP3.96□□□□□ -1.78
CTC1-209ENST00000581729 PAMR1Q6UXH9 720 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 ARHGEF18Q6ZSZ5 1173 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 CHSY3Q70JA7 882 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 CDC20BQ86Y33 519 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 TRAPPC5Q8IUR0 188 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 RBM12BQ8IXT5 1001 aaKnown RBP3.96□□□□□ -1.78
CTC1-209ENST00000581729 PRSS58Q8IYP2 241 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 ULK2Q8IYT8 1036 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 RASGEF1AQ8N9B8 481 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 FLVCR1-AS1Q8TAF5 88 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 ARRDC2Q8TBH0 407 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 COG1Q8WTW3 980 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 NELFBQ8WX92 580 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 GLYATL1Q969I3 302 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 HDAC10Q969S8 669 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 CCDC47Q96A33 483 aaKnown RBP3.96□□□□□ -1.78
CTC1-209ENST00000581729 MAGED4Q96JG8 741 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 SIGLEC12Q96PQ1 595 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 LMF1Q96S06 567 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 LYSMD1Q96S90 227 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 DPH2Q9BQC3 489 aaPredicted RBP3.96□□□□□ -1.78
CTC1-209ENST00000581729 SNRNP25Q9BV90 132 aaKnown RBP3.96□□□□□ -1.78
CTC1-209ENST00000581729 NUP85Q9BW27 656 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 SPATA16Q9BXB7 569 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 NAA15Q9BXJ9 866 aaKnown RBP3.96□□□□□ -1.78
CTC1-209ENST00000581729 POLDIP3Q9BY77 421 aaKnown RBP3.96□□□□□ -1.78
CTC1-209ENST00000581729 TRIM7Q9C029 511 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 SLC7A5P2Q9GIP4 190 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.96□□□□□ -1.78
CTC1-209ENST00000581729 WWP1Q9H0M0 922 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 VPS16Q9H269 839 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 PDCL3Q9H2J4 239 aa3.96□□□□□ -1.78
CTC1-209ENST00000581729 CLEC4MQ9H2X3 399 aaPredicted RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms