RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 PLAGL1Q9UM63 463 aa18.14■□□□□ 0.49
PPP4R1-215ENST00000580182 ICKQ9UPZ9 632 aa18.14■□□□□ 0.49
PPP4R1-215ENST00000580182 PCDHGA3Q9Y5H0 932 aa18.14■□□□□ 0.49
PPP4R1-215ENST00000580182 BTN3A1O00481 513 aa18.13■□□□□ 0.49
PPP4R1-215ENST00000580182 RAD51CO43502 376 aa18.13■□□□□ 0.49
PPP4R1-215ENST00000580182 APOA4P06727 396 aa18.13■□□□□ 0.49
PPP4R1-215ENST00000580182 SLC1A2P43004 574 aa18.13■□□□□ 0.49
PPP4R1-215ENST00000580182 PLOD1Q02809 727 aaPredicted RBP18.13■□□□□ 0.49
PPP4R1-215ENST00000580182 SRSF6Q13247 344 aaKnown RBP18.13■□□□□ 0.49
PPP4R1-215ENST00000580182 CRYMQ14894 314 aa18.13■□□□□ 0.49
PPP4R1-215ENST00000580182 HSP90AA5PQ58FG0 334 aa18.13■□□□□ 0.49
PPP4R1-215ENST00000580182 DNAJC21Q5F1R6 531 aaKnown RBP18.13■□□□□ 0.49
PPP4R1-215ENST00000580182 DNTTIP2Q5QJE6 756 aaKnown RBP18.13■□□□□ 0.49
PPP4R1-215ENST00000580182 DCAF12Q5T6F0 453 aa18.13■□□□□ 0.49
PPP4R1-215ENST00000580182 RNF187Q5TA31 235 aaPredicted RBP18.13■□□□□ 0.49
PPP4R1-215ENST00000580182 ARMC6Q6NXE6 501 aa18.13■□□□□ 0.49
PPP4R1-215ENST00000580182 TBC1D21Q8IYX1 336 aa18.13■□□□□ 0.49
PPP4R1-215ENST00000580182 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.13■□□□□ 0.49
PPP4R1-215ENST00000580182 CFAP61Q8NHU2 1237 aa18.13■□□□□ 0.49
PPP4R1-215ENST00000580182 PANX3Q96QZ0 392 aa18.13■□□□□ 0.49
PPP4R1-215ENST00000580182 DDA1Q9BW61 102 aa18.13■□□□□ 0.49
PPP4R1-215ENST00000580182 DPH1Q9BZG8 443 aa18.13■□□□□ 0.49
PPP4R1-215ENST00000580182 B3GNT4Q9C0J1 378 aa18.13■□□□□ 0.49
PPP4R1-215ENST00000580182 TRIT1Q9H3H1 467 aaKnown RBP18.13■□□□□ 0.49
PPP4R1-215ENST00000580182 PLAC1Q9HBJ0 212 aa18.13■□□□□ 0.49
PPP4R1-215ENST00000580182 FBXO8Q9NRD0 319 aa18.13■□□□□ 0.49
PPP4R1-215ENST00000580182 IARS2Q9NSE4 1012 aaKnown RBP18.13■□□□□ 0.49
PPP4R1-215ENST00000580182 TDRKHQ9Y2W6 561 aaKnown RBP18.13■□□□□ 0.49
PPP4R1-215ENST00000580182 GSAPA4D1B5 854 aa18.12■□□□□ 0.49
PPP4R1-215ENST00000580182 PFDN6O15212 129 aa18.12■□□□□ 0.49
PPP4R1-215ENST00000580182 SLCO2B1O94956 709 aa18.12■□□□□ 0.49
PPP4R1-215ENST00000580182 ESR1P03372 595 aa18.12■□□□□ 0.49
PPP4R1-215ENST00000580182 ERVK-10P10266 1014 aa18.12■□□□□ 0.49
PPP4R1-215ENST00000580182 ELK3P41970 407 aa18.12■□□□□ 0.49
PPP4R1-215ENST00000580182 MPP1Q00013 466 aa18.12■□□□□ 0.49
PPP4R1-215ENST00000580182 FOXM1Q08050 763 aa18.12■□□□□ 0.49
PPP4R1-215ENST00000580182 KCNAB1Q14722 419 aa18.12■□□□□ 0.49
PPP4R1-215ENST00000580182 ZNF549Q6P9A3 640 aa18.12■□□□□ 0.49
PPP4R1-215ENST00000580182 OTOAQ7RTW8 1153 aa18.12■□□□□ 0.49
PPP4R1-215ENST00000580182 KCNMB4Q86W47 210 aa18.12■□□□□ 0.49
PPP4R1-215ENST00000580182 AMIGO1Q86WK6 493 aa18.12■□□□□ 0.49
PPP4R1-215ENST00000580182 ADGRF3Q8IZF5 1079 aa18.12■□□□□ 0.49
PPP4R1-215ENST00000580182 OR5K2Q8NHB8 316 aa18.12■□□□□ 0.49
PPP4R1-215ENST00000580182 DPH5Q9H2P9 285 aa18.12■□□□□ 0.49
PPP4R1-215ENST00000580182 CPNE5Q9HCH3 593 aa18.12■□□□□ 0.49
PPP4R1-215ENST00000580182 INTS10Q9NVR2 710 aaKnown RBP18.12■□□□□ 0.49
PPP4R1-215ENST00000580182 SEMA5BQ9P283 1151 aa18.12■□□□□ 0.49
PPP4R1-215ENST00000580182 CIDEBQ9UHD4 219 aa18.12■□□□□ 0.49
PPP4R1-215ENST00000580182 TSR3Q9UJK0 312 aaKnown RBP18.12■□□□□ 0.49
PPP4R1-215ENST00000580182 LHX6Q9UPM6 363 aa18.12■□□□□ 0.49
PPP4R1-215ENST00000580182 CHMP2BQ9UQN3 213 aa18.12■□□□□ 0.49
PPP4R1-215ENST00000580182 RUVBL2Q9Y230 463 aaKnown RBP18.12■□□□□ 0.49
PPP4R1-215ENST00000580182 SDK2Q58EX2 2172 aa18.12■□□□□ 0.49
PPP4R1-215ENST00000580182 TLCD2A6NGC4 264 aa18.11■□□□□ 0.49
PPP4R1-215ENST00000580182 POLR1CO15160 346 aaPredicted RBP18.11■□□□□ 0.49
PPP4R1-215ENST00000580182 HAUS5O94927 633 aa18.11■□□□□ 0.49
PPP4R1-215ENST00000580182 LIPCP11150 499 aa18.11■□□□□ 0.49
PPP4R1-215ENST00000580182 PKMP14618 531 aaKnown RBP18.11■□□□□ 0.49
PPP4R1-215ENST00000580182 NELFEP18615 380 aaKnown RBP18.11■□□□□ 0.49
PPP4R1-215ENST00000580182 CHRM3P20309 590 aa18.11■□□□□ 0.49
PPP4R1-215ENST00000580182 ADARP55265 1226 aaKnown RBP18.11■□□□□ 0.49
PPP4R1-215ENST00000580182 RAB15P59190 212 aa18.11■□□□□ 0.49
PPP4R1-215ENST00000580182 PRKAA1Q13131 559 aa18.11■□□□□ 0.49
PPP4R1-215ENST00000580182 TMED2Q15363 201 aa18.11■□□□□ 0.49
PPP4R1-215ENST00000580182 UNC5AQ6ZN44 842 aa18.11■□□□□ 0.49
PPP4R1-215ENST00000580182 DTX1Q86Y01 620 aa18.11■□□□□ 0.49
PPP4R1-215ENST00000580182 PDIK1LQ8N165 341 aa18.11■□□□□ 0.49
PPP4R1-215ENST00000580182 LMNTD1Q8N9Z9 388 aa18.11■□□□□ 0.49
PPP4R1-215ENST00000580182 UBXN4Q92575 508 aa18.11■□□□□ 0.49
PPP4R1-215ENST00000580182 CFAP36Q96G28 342 aa18.11■□□□□ 0.49
PPP4R1-215ENST00000580182 ELMO2Q96JJ3 720 aa18.11■□□□□ 0.49
PPP4R1-215ENST00000580182 SLC41A2Q96JW4 573 aa18.11■□□□□ 0.49
PPP4R1-215ENST00000580182 OR6C1Q96RD1 312 aa18.11■□□□□ 0.49
PPP4R1-215ENST00000580182 SLC30A3Q99726 388 aa18.11■□□□□ 0.49
PPP4R1-215ENST00000580182 ASPSCR1Q9BZE9 553 aa18.11■□□□□ 0.49
PPP4R1-215ENST00000580182 FBXO5Q9UKT4 447 aa18.11■□□□□ 0.49
PPP4R1-215ENST00000580182 SSUH2Q9Y2M2 353 aa18.11■□□□□ 0.49
PPP4R1-215ENST00000580182 NFS1Q9Y697 457 aa18.11■□□□□ 0.49
PPP4R1-215ENST00000580182 FAM187AA6NFU0 413 aa18.1■□□□□ 0.49
PPP4R1-215ENST00000580182 FOLR1P15328 257 aa18.1■□□□□ 0.49
PPP4R1-215ENST00000580182 PRDX3P30048 256 aaKnown RBP18.1■□□□□ 0.49
PPP4R1-215ENST00000580182 HIF1AQ16665 826 aa18.1■□□□□ 0.49
PPP4R1-215ENST00000580182 SPANXN3Q5MJ09 141 aa18.1■□□□□ 0.49
PPP4R1-215ENST00000580182 PLEKHS1Q5SXH7 462 aa18.1■□□□□ 0.49
PPP4R1-215ENST00000580182 CNSTQ6PJW8 725 aa18.1■□□□□ 0.49
PPP4R1-215ENST00000580182 CEACAM20Q6UY09 585 aa18.1■□□□□ 0.49
PPP4R1-215ENST00000580182 ANKMY2Q8IV38 441 aa18.1■□□□□ 0.49
PPP4R1-215ENST00000580182 CD180Q99467 661 aa18.1■□□□□ 0.49
PPP4R1-215ENST00000580182 ERP44Q9BS26 406 aa18.1■□□□□ 0.49
PPP4R1-215ENST00000580182 SPRY4Q9C004 299 aa18.1■□□□□ 0.49
PPP4R1-215ENST00000580182 PRORYQ9H606 182 aa18.1■□□□□ 0.49
PPP4R1-215ENST00000580182 SPHK1Q9NYA1 384 aa18.1■□□□□ 0.49
PPP4R1-215ENST00000580182 SLC17A6Q9P2U8 582 aa18.1■□□□□ 0.49
PPP4R1-215ENST00000580182 POLG2Q9UHN1 485 aa18.1■□□□□ 0.49
PPP4R1-215ENST00000580182 POMT2Q9UKY4 750 aa18.1■□□□□ 0.49
PPP4R1-215ENST00000580182 MED16Q9Y2X0 877 aa18.1■□□□□ 0.49
PPP4R1-215ENST00000580182 TEX264Q9Y6I9 313 aa18.1■□□□□ 0.49
PPP4R1-215ENST00000580182 ITPR1Q14643 2758 aa18.09■□□□□ 0.49
PPP4R1-215ENST00000580182 KRT87PA6NCN2 255 aa18.09■□□□□ 0.49
PPP4R1-215ENST00000580182 SLC9B1P1A6NJY1 282 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms