RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 THAP3Q8WTV1 239 aaPredicted RBP10.61□□□□□ -0.71
GGA3-206ENST00000578773 HDAC10Q969S8 669 aa10.61□□□□□ -0.71
GGA3-206ENST00000578773 LYSMD1Q96S90 227 aa10.61□□□□□ -0.71
GGA3-206ENST00000578773 PCDHB18PQ96TA0 734 aa10.61□□□□□ -0.71
GGA3-206ENST00000578773 TRIM51Q9BSJ1 452 aa10.61□□□□□ -0.71
GGA3-206ENST00000578773 XKR8Q9H6D3 395 aa10.61□□□□□ -0.71
GGA3-206ENST00000578773 SYTL2Q9HCH5 934 aa10.61□□□□□ -0.71
GGA3-206ENST00000578773 RMND1Q9NWS8 449 aa10.61□□□□□ -0.71
GGA3-206ENST00000578773 COQ3Q9NZJ6 369 aa10.61□□□□□ -0.71
GGA3-206ENST00000578773 CWC15Q9P013 229 aaKnown RBP10.61□□□□□ -0.71
GGA3-206ENST00000578773 IL17CQ9P0M4 197 aa10.61□□□□□ -0.71
GGA3-206ENST00000578773 SHOC2Q9UQ13 582 aa10.61□□□□□ -0.71
GGA3-206ENST00000578773 ARHGAP21Q5T5U3 1957 aa10.6□□□□□ -0.71
GGA3-206ENST00000578773 OR2AG2A6NM03 316 aa10.6□□□□□ -0.71
GGA3-206ENST00000578773 GPR89AB7ZAQ6 455 aa10.6□□□□□ -0.71
GGA3-206ENST00000578773 DAPK3O43293 454 aa10.6□□□□□ -0.71
GGA3-206ENST00000578773 VEGFDO43915 354 aa10.6□□□□□ -0.71
GGA3-206ENST00000578773 KLK8O60259 260 aa10.6□□□□□ -0.71
GGA3-206ENST00000578773 MT-CYBP00156 380 aaPredicted RBP10.6□□□□□ -0.71
GGA3-206ENST00000578773 HPP00738 406 aa10.6□□□□□ -0.71
GGA3-206ENST00000578773 GPR89BP0CG08 455 aa10.6□□□□□ -0.71
GGA3-206ENST00000578773 ITGAMP11215 1152 aa10.6□□□□□ -0.71
GGA3-206ENST00000578773 PYGMP11217 842 aa10.6□□□□□ -0.71
GGA3-206ENST00000578773 NR0B1P51843 470 aaKnown RBP10.6□□□□□ -0.71
GGA3-206ENST00000578773 ZNF143P52747 638 aaPredicted RBP10.6□□□□□ -0.71
GGA3-206ENST00000578773 TMEM115Q12893 351 aaPredicted RBP10.6□□□□□ -0.71
GGA3-206ENST00000578773 ATP13A5Q4VNC0 1218 aa10.6□□□□□ -0.71
GGA3-206ENST00000578773 PPP6R3Q5H9R7 873 aaPredicted RBP10.6□□□□□ -0.71
GGA3-206ENST00000578773 RNFT1Q5M7Z0 435 aa10.6□□□□□ -0.71
GGA3-206ENST00000578773 OVCH1Q7RTY7 1134 aa10.6□□□□□ -0.71
GGA3-206ENST00000578773 TMTC1Q8IUR5 882 aa10.6□□□□□ -0.71
GGA3-206ENST00000578773 TRAM1L1Q8N609 369 aa10.6□□□□□ -0.71
GGA3-206ENST00000578773 MSANTD4Q8NCY6 345 aa10.6□□□□□ -0.71
GGA3-206ENST00000578773 ANKRD20A12PQ8NF67 263 aa10.6□□□□□ -0.71
GGA3-206ENST00000578773 LILRB4Q8NHJ6 448 aa10.6□□□□□ -0.71
GGA3-206ENST00000578773 DHTKD1Q96HY7 919 aaPredicted RBP10.6□□□□□ -0.71
GGA3-206ENST00000578773 MCEEQ96PE7 176 aa10.6□□□□□ -0.71
GGA3-206ENST00000578773 SIGLEC12Q96PQ1 595 aa10.6□□□□□ -0.71
GGA3-206ENST00000578773 SELENOOQ9BVL4 669 aa10.6□□□□□ -0.71
GGA3-206ENST00000578773 PCDH9Q9HC56 1237 aa10.6□□□□□ -0.71
GGA3-206ENST00000578773 KLHL1Q9NR64 748 aa10.6□□□□□ -0.71
GGA3-206ENST00000578773 RASSF1Q9NS23 344 aa10.6□□□□□ -0.71
GGA3-206ENST00000578773 TXLNGQ9NUQ3 528 aa10.6□□□□□ -0.71
GGA3-206ENST00000578773 PCSK1NQ9UHG2 260 aa10.6□□□□□ -0.71
GGA3-206ENST00000578773 OR5H15A6NDH6 313 aa10.59□□□□□ -0.71
GGA3-206ENST00000578773 COX6A1P12074 109 aa10.59□□□□□ -0.71
GGA3-206ENST00000578773 ALAS2P22557 587 aa10.59□□□□□ -0.71
GGA3-206ENST00000578773 AMPD1P23109 780 aa10.59□□□□□ -0.71
GGA3-206ENST00000578773 PTGER1P34995 402 aa10.59□□□□□ -0.71
GGA3-206ENST00000578773 ALDH6A1Q02252 535 aaKnown RBP10.59□□□□□ -0.71
GGA3-206ENST00000578773 EEF1A2Q05639 463 aaKnown RBP10.59□□□□□ -0.71
GGA3-206ENST00000578773 ANKRD20A8PQ5CZ79 823 aa10.59□□□□□ -0.71
GGA3-206ENST00000578773 ZNF766Q5HY98 468 aa10.59□□□□□ -0.71
GGA3-206ENST00000578773 MARC1Q5VT66 337 aa10.59□□□□□ -0.71
GGA3-206ENST00000578773 ARHGEF18Q6ZSZ5 1173 aa10.59□□□□□ -0.71
GGA3-206ENST00000578773 NEK10Q6ZWH5 1172 aa10.59□□□□□ -0.71
GGA3-206ENST00000578773 AMZ2Q86W34 360 aa10.59□□□□□ -0.71
GGA3-206ENST00000578773 CREBRFQ8IUR6 639 aa10.59□□□□□ -0.71
GGA3-206ENST00000578773 KBTBD2Q8IY47 623 aa10.59□□□□□ -0.71
GGA3-206ENST00000578773 NDUFAF2Q8N183 169 aa10.59□□□□□ -0.71
GGA3-206ENST00000578773 C19orf47Q8N9M1 422 aaKnown RBP10.59□□□□□ -0.71
GGA3-206ENST00000578773 ARRDC2Q8TBH0 407 aa10.59□□□□□ -0.71
GGA3-206ENST00000578773 CCDC110Q8TBZ0 833 aa10.59□□□□□ -0.71
GGA3-206ENST00000578773 SPATA32Q96LK8 384 aa10.59□□□□□ -0.71
GGA3-206ENST00000578773 FAM81BQ96LP2 452 aa10.59□□□□□ -0.71
GGA3-206ENST00000578773 FRMD6Q96NE9 622 aa10.59□□□□□ -0.71
GGA3-206ENST00000578773 GSDMAQ96QA5 445 aa10.59□□□□□ -0.71
GGA3-206ENST00000578773 CLSTN2Q9H4D0 955 aa10.59□□□□□ -0.71
GGA3-206ENST00000578773 DMRT3Q9NQL9 472 aa10.59□□□□□ -0.71
GGA3-206ENST00000578773 TRPS1Q9UHF7 1281 aa10.59□□□□□ -0.71
GGA3-206ENST00000578773 MAN1B1Q9UKM7 699 aa10.59□□□□□ -0.71
GGA3-206ENST00000578773 CFAP45Q9UL16 551 aa10.59□□□□□ -0.71
GGA3-206ENST00000578773 MRPS2Q9Y399 296 aaKnown RBP10.59□□□□□ -0.71
GGA3-206ENST00000578773 SVEP1Q4LDE5 3571 aa10.58□□□□□ -0.72
GGA3-206ENST00000578773 AURKAO14965 403 aa10.58□□□□□ -0.72
GGA3-206ENST00000578773 ASNA1O43681 348 aa10.58□□□□□ -0.72
GGA3-206ENST00000578773 USP1O94782 785 aa10.58□□□□□ -0.72
GGA3-206ENST00000578773 ZRANB2O95218 330 aaKnown RBP eCLIP10.58□□□□□ -0.72
GGA3-206ENST00000578773 MED26O95402 600 aa10.58□□□□□ -0.72
GGA3-206ENST00000578773 MMP2P08253 660 aa10.58□□□□□ -0.72
GGA3-206ENST00000578773 MCM3P25205 808 aa10.58□□□□□ -0.72
GGA3-206ENST00000578773 HTR7P34969 479 aa10.58□□□□□ -0.72
GGA3-206ENST00000578773 OR1D4P47884 311 aa10.58□□□□□ -0.72
GGA3-206ENST00000578773 BPIFB4P59827 614 aa10.58□□□□□ -0.72
GGA3-206ENST00000578773 PRKAA1Q13131 559 aa10.58□□□□□ -0.72
GGA3-206ENST00000578773 RALGPS1Q5JS13 557 aa10.58□□□□□ -0.72
GGA3-206ENST00000578773 FCRLBQ6BAA4 426 aa10.58□□□□□ -0.72
GGA3-206ENST00000578773 TTLL10Q6ZVT0 673 aa10.58□□□□□ -0.72
GGA3-206ENST00000578773 DAAM2Q86T65 1068 aa10.58□□□□□ -0.72
GGA3-206ENST00000578773 CD163Q86VB7 1156 aa10.58□□□□□ -0.72
GGA3-206ENST00000578773 ADGRF3Q8IZF5 1079 aa10.58□□□□□ -0.72
GGA3-206ENST00000578773 TEX26Q8N6G2 289 aa10.58□□□□□ -0.72
GGA3-206ENST00000578773 N4BP2L2Q92802 583 aaPredicted RBP10.58□□□□□ -0.72
GGA3-206ENST00000578773 FKBP10Q96AY3 582 aa10.58□□□□□ -0.72
GGA3-206ENST00000578773 ZSCAN5AQ9BUG6 496 aa10.58□□□□□ -0.72
GGA3-206ENST00000578773 BPIFA1Q9NP55 256 aa10.58□□□□□ -0.72
GGA3-206ENST00000578773 KCNJ16Q9NPI9 418 aa10.58□□□□□ -0.72
GGA3-206ENST00000578773 ANKRD10Q9NXR5 420 aa10.58□□□□□ -0.72
GGA3-206ENST00000578773 ACTR10Q9NZ32 417 aa10.58□□□□□ -0.72
GGA3-206ENST00000578773 KLHL20Q9Y2M5 609 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms