RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	VPS9D1	Q9Y2B5	631 aa		13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	PCDHB11	Q9Y5F2	797 aa		13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	ZCWPW2	A0A1B0GU75	182 aa		13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	OR6C74	A6NCV1	312 aa		13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	TLCD2	A6NGC4	264 aa		13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501		H3BMM5	538 aa		13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	SMAP	O00193	183 aa		13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	DNALI1	O14645	258 aa	Predicted RBP	13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	POLR1C	O15160	346 aa	Predicted RBP	13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	KIF1C	O43896	1103 aa	Known RBP	13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	IVD	P26440	423 aa		13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	PPP1CA	P62136	330 aa		13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	PRKAA1	Q13131	559 aa		13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	DHX34	Q14147	1143 aa	Known RBP	13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	DNAJC21	Q5F1R6	531 aa	Known RBP	13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	ANKS6	Q68DC2	871 aa		13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	PTRHD1	Q6GMV3	140 aa	Known RBP	13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	NEPRO	Q6NW34	567 aa		13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	ARMC6	Q6NXE6	501 aa		13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	CILP2	Q8IUL8	1156 aa		13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	TBC1D21	Q8IYX1	336 aa		13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	PHC3	Q8NDX5	983 aa		13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	OR4E2	Q8NGC2	313 aa		13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	OR5K2	Q8NHB8	316 aa		13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	JPH3	Q8WXH2	748 aa	Predicted RBP	13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	PMEPA1	Q969W9	287 aa		13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	SIGLEC10	Q96LC7	697 aa		13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	TRIT1	Q9H3H1	467 aa	Known RBP	13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	SRMS	Q9H3Y6	488 aa		13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	CDYL	Q9Y232	598 aa		13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	ASF1A	Q9Y294	204 aa		13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	PIKFYVE	Q9Y2I7	2098 aa		13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	RPS6KL1	Q9Y6S9	549 aa		13.26	□□□□□ -0.29
CSNK1D-208	ENST00000578501	IGHV5-51	A0A0C4DH38	117 aa		13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	IQCF5	A8MTL0	148 aa		13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501		K7ENP7	123 aa		13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	KDM1A	O60341	852 aa		13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	ESR1	P03372	595 aa		13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	APOA4	P06727	396 aa		13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	SEPHS1	P49903	392 aa		13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	ETF1	P62495	437 aa	Known RBP	13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	DR1	Q01658	176 aa		13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	HSPA14	Q0VDF9	509 aa		13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	MORF4L2	Q15014	288 aa		13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	BRD3	Q15059	726 aa		13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	TGIF1	Q15583	401 aa		13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	INO80C	Q6PI98	192 aa	Predicted RBP	13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	BPHL	Q86WA6	291 aa	Predicted RBP	13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	AMIGO1	Q86WK6	493 aa		13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	KLHL7	Q8IXQ5	586 aa		13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	LMNTD2	Q8IXW0	634 aa		13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	AGGF1	Q8N302	714 aa	eCLIP	13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	OTUD6B	Q8N6M0	293 aa		13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	OR52E1	Q8NGJ3	308 aa		13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	LKAAEAR1	Q8TD35	194 aa		13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	LPGAT1	Q92604	370 aa		13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	ZNF669	Q96BR6	464 aa	Predicted RBP	13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	BIRC8	Q96P09	236 aa		13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	MAP3K3	Q99759	626 aa		13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	NAT9	Q9BTE0	207 aa		13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	INTS10	Q9NVR2	710 aa	Known RBP	13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	POMT2	Q9UKY4	750 aa		13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	TMEM184B	Q9Y519	407 aa	Predicted RBP	13.25	□□□□□ -0.29
CSNK1D-208	ENST00000578501	UBA6	A0AVT1	1052 aa	Predicted RBP	13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	GOLGA8K	D6RF30	607 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	GOLGA8T	H3BQL2	631 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	ZBTB11	O95625	1053 aa	Predicted RBP	13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	TTC4	O95801	387 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	RPN2	P04844	631 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	FGF5	P12034	268 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	ITGB6	P18564	788 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	POLR2C	P19387	275 aa	Predicted RBP	13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	SHMT2	P34897	504 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	ATP1A2	P50993	1020 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	KPNA2	P52292	529 aa	Known RBP	13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	EIF3B	P55884	814 aa	Known RBP	13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	HSD11B2	P80365	405 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	FOXM1	Q08050	763 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	PRKG2	Q13237	762 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	MAP7	Q14244	749 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	TMED2	Q15363	201 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	LONRF1	Q17RB8	773 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	PLEKHS1	Q5SXH7	462 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	IZUMO3	Q5VZ72	239 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	UNC5D	Q6UXZ4	953 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	NAPRT	Q6XQN6	538 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	CCDC81	Q6ZN84	652 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	CENPU	Q71F23	418 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	OTOA	Q7RTW8	1153 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	ADGRF3	Q8IZF5	1079 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	KRT222	Q8N1A0	295 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	D2HGDH	Q8N465	521 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	OR5AR1	Q8NGP9	310 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	CALML6	Q8TD86	181 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	NKD1	Q969G9	470 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	STAMBPL1	Q96FJ0	436 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	FCRL4	Q96PJ5	515 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	OR6C1	Q96RD1	312 aa		13.24	□□□□□ -0.29
CSNK1D-208	ENST00000578501	CTRC	Q99895	268 aa		13.24	□□□□□ -0.29

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