RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 UHRF1BP1LA0JNW5 1464 aa4.82□□□□□ -1.64
NUP88-213ENST00000576862 DAPK1P53355 1430 aa4.82□□□□□ -1.64
NUP88-213ENST00000576862 AKNAQ7Z591 1439 aa4.82□□□□□ -1.64
NUP88-213ENST00000576862 TIMM44O43615 452 aa4.82□□□□□ -1.64
NUP88-213ENST00000576862 EDIL3O43854 480 aa4.82□□□□□ -1.64
NUP88-213ENST00000576862 CD48P09326 243 aa4.82□□□□□ -1.64
NUP88-213ENST00000576862 PRSS56P0CW18 603 aa4.82□□□□□ -1.64
NUP88-213ENST00000576862 LIFP15018 202 aa4.82□□□□□ -1.64
NUP88-213ENST00000576862 ACTN2P35609 894 aa4.82□□□□□ -1.64
NUP88-213ENST00000576862 ARSEP51690 589 aa4.82□□□□□ -1.64
NUP88-213ENST00000576862 PLA2G7Q13093 441 aa4.82□□□□□ -1.64
NUP88-213ENST00000576862 GRAPQ13588 217 aa4.82□□□□□ -1.64
NUP88-213ENST00000576862 ADAM5Q6NVV9 412 aa4.82□□□□□ -1.64
NUP88-213ENST00000576862 CEP57Q86XR8 500 aa4.82□□□□□ -1.64
NUP88-213ENST00000576862 TAGAPQ8N103 731 aa4.82□□□□□ -1.64
NUP88-213ENST00000576862 ZNF843Q8N446 348 aa4.82□□□□□ -1.64
NUP88-213ENST00000576862 CPSF7Q8N684 471 aaKnown RBP4.82□□□□□ -1.64
NUP88-213ENST00000576862 ZFAND2BQ8WV99 257 aa4.82□□□□□ -1.64
NUP88-213ENST00000576862 LGALS12Q96DT0 336 aa4.82□□□□□ -1.64
NUP88-213ENST00000576862 CDRT15Q96T59 188 aa4.82□□□□□ -1.64
NUP88-213ENST00000576862 TMX4Q9H1E5 349 aaPredicted RBP4.82□□□□□ -1.64
NUP88-213ENST00000576862 PDE7BQ9NP56 450 aa4.82□□□□□ -1.64
NUP88-213ENST00000576862 ACKR4Q9NPB9 350 aa4.82□□□□□ -1.64
NUP88-213ENST00000576862 OSER1Q9NX31 292 aa4.82□□□□□ -1.64
NUP88-213ENST00000576862 NSMCE4AQ9NXX6 385 aa4.82□□□□□ -1.64
NUP88-213ENST00000576862 PSD3Q9NYI0 1048 aa4.82□□□□□ -1.64
NUP88-213ENST00000576862 NAP1L2Q9ULW6 460 aaPredicted RBP4.82□□□□□ -1.64
NUP88-213ENST00000576862 KIF14Q15058 1648 aa4.82□□□□□ -1.64
NUP88-213ENST00000576862 PTPN23Q9H3S7 1636 aa4.82□□□□□ -1.64
NUP88-213ENST00000576862 ROCK1Q13464 1354 aa4.81□□□□□ -1.64
NUP88-213ENST00000576862 RPGRIP1LQ68CZ1 1315 aa4.81□□□□□ -1.64
NUP88-213ENST00000576862 OR6C76A6NM76 312 aa4.81□□□□□ -1.64
NUP88-213ENST00000576862 MAGEB17A8MXT2 336 aa4.81□□□□□ -1.64
NUP88-213ENST00000576862 AHCYL1O43865 530 aa4.81□□□□□ -1.64
NUP88-213ENST00000576862 CSPG5O95196 566 aa4.81□□□□□ -1.64
NUP88-213ENST00000576862 CASP2P42575 452 aa4.81□□□□□ -1.64
NUP88-213ENST00000576862 GNB1P62873 340 aa4.81□□□□□ -1.64
NUP88-213ENST00000576862 TMEM30BQ3MIR4 351 aa4.81□□□□□ -1.64
NUP88-213ENST00000576862 ZNF876PQ49A33 203 aa4.81□□□□□ -1.64
NUP88-213ENST00000576862 IGSF11Q5DX21 431 aa4.81□□□□□ -1.64
NUP88-213ENST00000576862 DHRS7BQ6IAN0 325 aaPredicted RBP4.81□□□□□ -1.64
NUP88-213ENST00000576862 ARHGAP11AQ6P4F7 1023 aa4.81□□□□□ -1.64
NUP88-213ENST00000576862 TEX38Q6PEX7 206 aa4.81□□□□□ -1.64
NUP88-213ENST00000576862 FIGLAQ6QHK4 219 aa4.81□□□□□ -1.64
NUP88-213ENST00000576862 TMCO3Q6UWJ1 677 aa4.81□□□□□ -1.64
NUP88-213ENST00000576862 LINGO4Q6UY18 593 aa4.81□□□□□ -1.64
NUP88-213ENST00000576862 SCML4Q8N228 414 aa4.81□□□□□ -1.64
NUP88-213ENST00000576862 OR2AJ1Q8NGZ0 328 aa4.81□□□□□ -1.64
NUP88-213ENST00000576862 SNRNP27Q8WVK2 155 aaKnown RBP4.81□□□□□ -1.64
NUP88-213ENST00000576862 RBM4Q9BWF3 364 aaKnown RBP4.81□□□□□ -1.64
NUP88-213ENST00000576862 TEX12Q9BXU0 123 aa4.81□□□□□ -1.64
NUP88-213ENST00000576862 OLFML3Q9NRN5 406 aa4.81□□□□□ -1.64
NUP88-213ENST00000576862 KDM5BQ9UGL1 1544 aa4.81□□□□□ -1.64
NUP88-213ENST00000576862 CAMSAP2Q08AD1 1489 aa4.81□□□□□ -1.64
NUP88-213ENST00000576862 GPR75-ASB3A0A0A6YYF3 556 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 MED19A0JLT2 244 aaPredicted RBP4.8□□□□□ -1.64
NUP88-213ENST00000576862 BICDL2A1A5D9 508 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 PLOD2O00469 737 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 CAVIN2O95810 425 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 VPREB1P12018 145 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 GABRA5P31644 462 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 EIF2DP41214 584 aaKnown RBP4.8□□□□□ -1.64
NUP88-213ENST00000576862 STK4Q13043 487 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 PRKG2Q13237 762 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 NTRK2Q16620 822 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 C15orf39Q6ZRI6 1047 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 MFSD6Q6ZSS7 791 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 NOTCH2NLQ7Z3S9 236 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 FBXO39Q8N4B4 442 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 TMEM190Q8WZ59 177 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 MTERF3Q96E29 417 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 RSRC1Q96IZ7 334 aaKnown RBP4.8□□□□□ -1.64
NUP88-213ENST00000576862 SGK494Q96LW2 274 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 NEK1Q96PY6 1258 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 TSPAN18Q96SJ8 248 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 RHNO1Q9BSD3 238 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 FSD1Q9BTV5 496 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 MXD3Q9BW11 206 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 MOV10L1Q9BXT6 1211 aaKnown RBP4.8□□□□□ -1.64
NUP88-213ENST00000576862 VN1R1Q9GZP7 353 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 RSPH9Q9H1X1 276 aaPredicted RBP4.8□□□□□ -1.64
NUP88-213ENST00000576862 CCDC68Q9H2F9 335 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 DPAGT1Q9H3H5 408 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 SIX2Q9NPC8 291 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 GIMAP4Q9NUV9 329 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 COQ3Q9NZJ6 369 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 TMEM5Q9Y2B1 443 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 C2CD2Q9Y426 696 aa4.8□□□□□ -1.64
NUP88-213ENST00000576862 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.8□□□□□ -1.64
NUP88-213ENST00000576862 A6NL46 340 aa4.79□□□□□ -1.64
NUP88-213ENST00000576862 PRR32B1ATL7 298 aa4.79□□□□□ -1.64
NUP88-213ENST00000576862 E9PI62 339 aa4.79□□□□□ -1.64
NUP88-213ENST00000576862 XRCC3O43542 346 aa4.79□□□□□ -1.64
NUP88-213ENST00000576862 PRAMEF11O60813 436 aa4.79□□□□□ -1.64
NUP88-213ENST00000576862 BEST1O76090 585 aa4.79□□□□□ -1.64
NUP88-213ENST00000576862 BCL10O95999 233 aa4.79□□□□□ -1.64
NUP88-213ENST00000576862 APOHP02749 345 aaPredicted RBP4.79□□□□□ -1.64
NUP88-213ENST00000576862 FRMD6-AS1P0C7T7 363 aa4.79□□□□□ -1.64
NUP88-213ENST00000576862 GNB3P16520 340 aa4.79□□□□□ -1.64
NUP88-213ENST00000576862 CHRNB4P30926 498 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms