RNA–Protein interactions for RNA: ENST00000576019.5

VPS53-219, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 3

Gene VPS53, Length 613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-219ENST00000576019 ABI3BPQ7Z7G0 1075 aa5.7□□□□□ -1.5
VPS53-219ENST00000576019 ZNF595Q8IYB9 648 aa5.7□□□□□ -1.5
VPS53-219ENST00000576019 GSPT2Q8IYD1 628 aaKnown RBP5.7□□□□□ -1.5
VPS53-219ENST00000576019 CLYBLQ8N0X4 340 aa5.7□□□□□ -1.5
VPS53-219ENST00000576019 TMEM170AQ8WVE7 144 aa5.7□□□□□ -1.5
VPS53-219ENST00000576019 BOD1Q96IK1 185 aa5.7□□□□□ -1.5
VPS53-219ENST00000576019 SPATA13Q96N96 652 aa5.7□□□□□ -1.5
VPS53-219ENST00000576019 TEFMQ96QE5 360 aaKnown RBP5.7□□□□□ -1.5
VPS53-219ENST00000576019 MRIQ9BWK5 157 aa5.7□□□□□ -1.5
VPS53-219ENST00000576019 S1PR5Q9H228 398 aa5.7□□□□□ -1.5
VPS53-219ENST00000576019 DPH5Q9H2P9 285 aa5.7□□□□□ -1.5
VPS53-219ENST00000576019 FZD8Q9H461 694 aa5.7□□□□□ -1.5
VPS53-219ENST00000576019 ZNF768Q9H5H4 540 aaKnown RBP5.7□□□□□ -1.5
VPS53-219ENST00000576019 TBC1D17Q9HA65 648 aa5.7□□□□□ -1.5
VPS53-219ENST00000576019 PIH1D3Q9NQM4 214 aaKnown RBP5.7□□□□□ -1.5
VPS53-219ENST00000576019 DNAJC17Q9NVM6 304 aaKnown RBP5.7□□□□□ -1.5
VPS53-219ENST00000576019 P4HTMQ9NXG6 502 aa5.7□□□□□ -1.5
VPS53-219ENST00000576019 FBXO40Q9UH90 709 aa5.7□□□□□ -1.5
VPS53-219ENST00000576019 TSPYL4Q9UJ04 414 aa5.7□□□□□ -1.5
VPS53-219ENST00000576019 FBXW2Q9UKT8 454 aa5.7□□□□□ -1.5
VPS53-219ENST00000576019 SH2B3Q9UQQ2 575 aa5.7□□□□□ -1.5
VPS53-219ENST00000576019 HEMK1Q9Y5R4 338 aaPredicted RBP5.7□□□□□ -1.5
VPS53-219ENST00000576019 TEX264Q9Y6I9 313 aa5.7□□□□□ -1.5
VPS53-219ENST00000576019 GREB1Q4ZG55 1949 aa5.7□□□□□ -1.5
VPS53-219ENST00000576019 ATAD5Q96QE3 1844 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 MICAL3Q7RTP6 2002 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 A0A1W2PPM1 405 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 TMEM247A6NEH6 219 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 AHRRA9YTQ3 701 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 B8ZZF3 427 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 ATP2A1O14983 1001 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 CTAGE5O15320 804 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 ZBTB43O43298 467 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 NCR1O76036 304 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 DDHD2O94830 711 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 APBB3O95704 486 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 RLN1P04808 185 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 CHRM2P08172 466 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 VIMP08670 466 aaKnown RBP5.69□□□□□ -1.5
VPS53-219ENST00000576019 PFKFB1P16118 471 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 PRLRP16471 622 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 KLRC2P26717 231 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 ADRA1BP35368 520 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 ZNF84P51523 738 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 GPR143P51810 404 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 GMFBP60983 142 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 SORDQ00796 357 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 CSTF1Q05048 431 aaKnown RBP5.69□□□□□ -1.5
VPS53-219ENST00000576019 SLC18A2Q05940 514 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 LRRC74AQ0VAA2 488 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 RESTQ13127 1097 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 KRT33BQ14525 404 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 SHBQ15464 509 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 LPAL2Q16609 132 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 TCTN1Q2MV58 587 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 VWC2Q2TAL6 325 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 ANXA2RQ3ZCQ2 193 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 C6orf141Q5SZD1 244 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 TMEM268Q5VZI3 342 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 HEPHL1Q6MZM0 1159 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 DHRS13Q6UX07 377 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 ZBTB49Q6ZSB9 765 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 C11orf57Q6ZUT1 292 aaPredicted RBP5.69□□□□□ -1.5
VPS53-219ENST00000576019 DZIP1Q86YF9 867 aaKnown RBP5.69□□□□□ -1.5
VPS53-219ENST00000576019 FAM219AQ8IW50 185 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 MCEMP1Q8IX19 187 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 SLC35F3Q8IY50 421 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 URGCPQ8TCY9 931 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 FAR1Q8WVX9 515 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 DNASE1L2Q92874 299 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 EXT2Q93063 718 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 IGSF8Q969P0 613 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 ST6GALNAC6Q969X2 333 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 MIB2Q96AX9 1013 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 ARSGQ96EG1 525 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 KAZALD1Q96I82 304 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 MMS19Q96T76 1030 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 MXRA8Q9BRK3 442 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 INPP5KQ9BT40 448 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 OSBPL8Q9BZF1 889 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 ZNF350Q9GZX5 532 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 AATFQ9NY61 560 aaKnown RBP eCLIP5.69□□□□□ -1.5
VPS53-219ENST00000576019 TAS2R14Q9NYV8 317 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 WNT16Q9UBV4 365 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 SLC24A2Q9UI40 661 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 LAMP5Q9UJQ1 280 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 CEPT1Q9Y6K0 416 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 CLCA3PQ9Y6N3 262 aa5.69□□□□□ -1.5
VPS53-219ENST00000576019 URB1O60287 2271 aaKnown RBP5.69□□□□□ -1.5
VPS53-219ENST00000576019 MTORP42345 2549 aa5.68□□□□□ -1.5
VPS53-219ENST00000576019 ADGRG4Q8IZF6 3080 aa5.68□□□□□ -1.5
VPS53-219ENST00000576019 A0A0A6YYC8 382 aaPredicted RBP5.68□□□□□ -1.5
VPS53-219ENST00000576019 CXorf65A6NEN9 183 aa5.68□□□□□ -1.5
VPS53-219ENST00000576019 MARCH11A6NNE9 402 aa5.68□□□□□ -1.5
VPS53-219ENST00000576019 I3L1I5 382 aaPredicted RBP5.68□□□□□ -1.5
VPS53-219ENST00000576019 BIN1O00499 593 aa5.68□□□□□ -1.5
VPS53-219ENST00000576019 LAMTOR5O43504 91 aa5.68□□□□□ -1.5
VPS53-219ENST00000576019 ATP2C2O75185 946 aa5.68□□□□□ -1.5
VPS53-219ENST00000576019 PEX11AO75192 247 aa5.68□□□□□ -1.5
VPS53-219ENST00000576019 CABYRO75952 493 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms