RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 MOCOSQ96EN8 888 aa23.46■■□□□ 1.35
ATPAF1-213ENST00000574428 NCKIPSDQ9NZQ3 722 aa23.46■■□□□ 1.35
ATPAF1-213ENST00000574428 CIDEBQ9UHD4 219 aa23.46■■□□□ 1.35
ATPAF1-213ENST00000574428 SDK1Q7Z5N4 2213 aa23.46■■□□□ 1.35
ATPAF1-213ENST00000574428 IFRD1O00458 451 aaPredicted RBP23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 IPO13O94829 963 aaKnown RBP23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 EML2O95834 649 aa23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 CATP04040 527 aaKnown RBP23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 CSF2P04141 144 aa23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 CTSEP14091 401 aa23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 NME1P15531 152 aaKnown RBP23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 MAPK9P45984 424 aa23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 RPIAP49247 311 aa23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 CCSMST1Q4G0I0 132 aa23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 PPP1R14CQ8TAE6 165 aa23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 GPBAR1Q8TDU6 330 aa23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 LRRC8CQ8TDW0 803 aa23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 ZNF75CPQ92670 426 aaPredicted RBP23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 TFGQ92734 400 aaPredicted RBP23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 SKA1Q96BD8 255 aa23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 LRRC61Q9BV99 259 aa23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 ASF1AQ9Y294 204 aa23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 TRIM13O60858 407 aa23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 C1orf105O95561 183 aa23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 S100BP04271 92 aaPredicted RBP23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 ENO2P09104 434 aaPredicted RBP23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 PRKAA2P54646 552 aa23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 C1orf61Q13536 156 aa23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 LPAL2Q16609 132 aa23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 PRRT3Q5FWE3 981 aa23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 CAPRIN2Q6IMN6 1127 aaKnown RBP23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 DUS1LQ6P1R4 473 aaKnown RBP23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 PHC3Q8NDX5 983 aa23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 CCDC126Q96EE4 140 aa23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 TMEM237Q96Q45 408 aa23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 EGFL8Q99944 293 aa23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 TRIM54Q9BYV2 358 aa23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 MANSC1Q9H8J5 431 aa23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 RDH14Q9HBH5 336 aa23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 ARL15Q9NXU5 204 aa23.45■■□□□ 1.34
ATPAF1-213ENST00000574428 GMNCA6NCL1 334 aa23.44■■□□□ 1.34
ATPAF1-213ENST00000574428 PRR5-ARHGAP8B1AHC4 643 aa23.44■■□□□ 1.34
ATPAF1-213ENST00000574428 KLK8O60259 260 aa23.44■■□□□ 1.34
ATPAF1-213ENST00000574428 MAP4P27816 1152 aaKnown RBP23.44■■□□□ 1.34
ATPAF1-213ENST00000574428 NAGLUP54802 743 aa23.44■■□□□ 1.34
ATPAF1-213ENST00000574428 NFKB2Q00653 900 aa23.44■■□□□ 1.34
ATPAF1-213ENST00000574428 CLCA4Q14CN2 919 aa23.44■■□□□ 1.34
ATPAF1-213ENST00000574428 C18orf21Q32NC0 220 aaPredicted RBP23.44■■□□□ 1.34
ATPAF1-213ENST00000574428 UAP1L1Q3KQV9 507 aa23.44■■□□□ 1.34
ATPAF1-213ENST00000574428 UNC5DQ6UXZ4 953 aa23.44■■□□□ 1.34
ATPAF1-213ENST00000574428 SLC22A9Q8IVM8 553 aa23.44■■□□□ 1.34
ATPAF1-213ENST00000574428 PDPRQ8NCN5 879 aa23.44■■□□□ 1.34
ATPAF1-213ENST00000574428 OR5AR1Q8NGP9 310 aa23.44■■□□□ 1.34
ATPAF1-213ENST00000574428 MCOLN3Q8TDD5 553 aa23.44■■□□□ 1.34
ATPAF1-213ENST00000574428 C12orf66Q96MD2 445 aa23.44■■□□□ 1.34
ATPAF1-213ENST00000574428 INSM2Q96T92 566 aaPredicted RBP23.44■■□□□ 1.34
ATPAF1-213ENST00000574428 GSDMCQ9BYG8 508 aa23.44■■□□□ 1.34
ATPAF1-213ENST00000574428 CCDC134Q9H6E4 229 aa23.44■■□□□ 1.34
ATPAF1-213ENST00000574428 SCHIP1Q9P0W5 487 aaPredicted RBP23.44■■□□□ 1.34
ATPAF1-213ENST00000574428 SUSD2Q9UGT4 822 aa23.44■■□□□ 1.34
ATPAF1-213ENST00000574428 WDFY4Q6ZS81 3184 aa23.43■■□□□ 1.34
ATPAF1-213ENST00000574428 ZFC3H1O60293 1989 aaKnown RBP23.43■■□□□ 1.34
ATPAF1-213ENST00000574428 PABPN1LA6NDY0 278 aaKnown RBP23.43■■□□□ 1.34
ATPAF1-213ENST00000574428 LRRC14BA6NHZ5 514 aa23.43■■□□□ 1.34
ATPAF1-213ENST00000574428 OR52A4PA6NMU1 304 aa23.43■■□□□ 1.34
ATPAF1-213ENST00000574428 SIX3O95343 332 aaPredicted RBP23.43■■□□□ 1.34
ATPAF1-213ENST00000574428 HIST1H2AGP0C0S8 130 aaPredicted RBP23.43■■□□□ 1.34
ATPAF1-213ENST00000574428 HIST1H2ADP20671 130 aa23.43■■□□□ 1.34
ATPAF1-213ENST00000574428 AGTR2P50052 363 aa23.43■■□□□ 1.34
ATPAF1-213ENST00000574428 KIF19Q2TAC6 998 aa23.43■■□□□ 1.34
ATPAF1-213ENST00000574428 FOXR1Q6PIV2 292 aa23.43■■□□□ 1.34
ATPAF1-213ENST00000574428 SYT12Q8IV01 421 aa23.43■■□□□ 1.34
ATPAF1-213ENST00000574428 SREK1Q8WXA9 508 aaKnown RBP23.43■■□□□ 1.34
ATPAF1-213ENST00000574428 HIST1H2AHQ96KK5 128 aa23.43■■□□□ 1.34
ATPAF1-213ENST00000574428 HIST1H2AJQ99878 128 aa23.43■■□□□ 1.34
ATPAF1-213ENST00000574428 H2AFJQ9BTM1 129 aa23.43■■□□□ 1.34
ATPAF1-213ENST00000574428 GATA5Q9BWX5 397 aaPredicted RBP23.43■■□□□ 1.34
ATPAF1-213ENST00000574428 IMP3Q9NV31 184 aaKnown RBP23.43■■□□□ 1.34
ATPAF1-213ENST00000574428 TP53BP1Q12888 1972 aaPredicted RBP23.43■■□□□ 1.34
ATPAF1-213ENST00000574428 TCP11X1B4DZS4 312 aa23.42■■□□□ 1.34
ATPAF1-213ENST00000574428 NDUFAB1O14561 156 aa23.42■■□□□ 1.34
ATPAF1-213ENST00000574428 ALDH18A1P54886 795 aaKnown RBP23.42■■□□□ 1.34
ATPAF1-213ENST00000574428 DNAJB13P59910 316 aa23.42■■□□□ 1.34
ATPAF1-213ENST00000574428 BNC1Q01954 994 aa23.42■■□□□ 1.34
ATPAF1-213ENST00000574428 TAF8Q7Z7C8 310 aa23.42■■□□□ 1.34
ATPAF1-213ENST00000574428 TRIM42Q8IWZ5 723 aa23.42■■□□□ 1.34
ATPAF1-213ENST00000574428 CCNYL1Q8N7R7 359 aa23.42■■□□□ 1.34
ATPAF1-213ENST00000574428 SNX11Q9Y5W9 270 aa23.42■■□□□ 1.34
ATPAF1-213ENST00000574428 ANKRD12Q6UB98 2062 aa23.42■■□□□ 1.34
ATPAF1-213ENST00000574428 SERPINE1P05121 402 aa23.42■■□□□ 1.34
ATPAF1-213ENST00000574428 BST1Q10588 318 aa23.42■■□□□ 1.34
ATPAF1-213ENST00000574428 SETDB1Q15047 1291 aa23.42■■□□□ 1.34
ATPAF1-213ENST00000574428 RPS27LQ71UM5 84 aaKnown RBP23.42■■□□□ 1.34
ATPAF1-213ENST00000574428 RAB44Q7Z6P3 723 aaPredicted RBP23.42■■□□□ 1.34
ATPAF1-213ENST00000574428 ESAMQ96AP7 390 aa23.42■■□□□ 1.34
ATPAF1-213ENST00000574428 RHBDF1Q96CC6 855 aa23.42■■□□□ 1.34
ATPAF1-213ENST00000574428 CCT8L2Q96SF2 557 aa23.42■■□□□ 1.34
ATPAF1-213ENST00000574428 TAAR2Q9P1P5 351 aa23.42■■□□□ 1.34
ATPAF1-213ENST00000574428 TMCO1Q9UM00 188 aa23.42■■□□□ 1.34
ATPAF1-213ENST00000574428 ASB1Q9Y576 335 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms