RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 IGHV5-10-1A0A0J9YXX1 117 aa12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 FAM159BA6NKW6 160 aa12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 TOX3O15405 576 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 GABRB3P28472 473 aa12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 CSTF2P33240 577 aaKnown RBP eCLIP12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 SHMT2P34897 504 aa12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 SLC12A2P55011 1212 aa12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 PRKG2Q13237 762 aa12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 PDAP1Q13442 181 aaKnown RBP12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 KLHL38Q2WGJ6 581 aa12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 IRGCQ6NXR0 463 aa12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 ZNF549Q6P9A3 640 aa12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 VRK3Q8IV63 474 aa12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 SLITRK4Q8IW52 837 aa12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 EIF1ADQ8N9N8 165 aaKnown RBP12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 SIDT2Q8NBJ9 832 aaKnown RBP12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 OR4E2Q8NGC2 313 aa12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 OR52E1Q8NGJ3 308 aa12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 OR5AR1Q8NGP9 310 aa12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 WDR36Q8NI36 951 aaKnown RBP12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 RAD51AP1Q96B01 352 aa12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 ATXN7L3BQ96GX2 97 aa12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 HGH1Q9BTY7 390 aa12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 RAB11FIP5Q9BXF6 653 aa12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 RHOJQ9H4E5 214 aa12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 HRASLS2Q9NWW9 162 aa12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 EPHA6Q9UF33 1036 aa12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 NFU1Q9UMS0 254 aa12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 VWA7Q9Y334 891 aa12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 AK5Q9Y6K8 562 aa12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 SPEGQ15772 3267 aa12.42□□□□□ -0.42
TRAPPC1-206ENST00000573989 MN1Q10571 1320 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 OR6C74A6NCV1 312 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 OR5K3A6NET4 321 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 CAPN5O15484 640 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 RASSF9O75901 435 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 SLU7O95391 586 aaKnown RBP12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 C9P02748 559 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 CATP04040 527 aaKnown RBP12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 F7P08709 466 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 JMJD7P0C870 316 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 MPC1LP0DKB6 136 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 THRAP10827 490 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 CSF2RBP32927 897 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 SPRP35270 261 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 GP5P40197 560 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 PDX1P52945 283 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 GPX6P59796 221 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 GBX1Q14549 363 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 KYNUQ16719 465 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 KBTBD12Q3ZCT8 623 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 SNAP47Q5SQN1 464 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 GRTP1Q5TC63 336 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 HECTD2Q5U5R9 776 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 RAB11FIP2Q7L804 512 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 B3GNT8Q7Z7M8 397 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 ZC3HC1Q86WB0 502 aaKnown RBP12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 AMIGO1Q86WK6 493 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 FBXO39Q8N4B4 442 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 AGBL5Q8NDL9 886 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 CD200R1Q8TD46 325 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 FBF1Q8TES7 1133 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 RSC1A1Q92681 617 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 TSPAN17Q96FV3 270 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 ELMO2Q96JJ3 720 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 CCDC74BQ96LY2 380 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 TGM7Q96PF1 710 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 CYTH2Q99418 400 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 CD180Q99467 661 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 NDNQ99608 321 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 SEMA6CQ9H3T2 930 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 POLR1BQ9H9Y6 1135 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 OR6C2Q9NZP2 312 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 PDP2Q9P2J9 529 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 SLC17A6Q9P2U8 582 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 SLC39A10Q9ULF5 831 aa12.41□□□□□ -0.42
TRAPPC1-206ENST00000573989 FAM95CA0A1B0GW59 222 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 PABPN1LA6NDY0 278 aaKnown RBP12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 TRABD2BA6NFA1 517 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 PLD2O14939 933 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 CASC3O15234 703 aaKnown RBP12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 MAP3K7O43318 606 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 ZBTB14O43829 449 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 MATN4O95460 622 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 ANKRD34CP0C6C1 535 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 HOXB3P14651 431 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 MCM3P25205 808 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 MAP4P27816 1152 aaKnown RBP12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 RBMS1P29558 406 aaKnown RBP12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 ECHS1P30084 290 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 MLLT3P42568 568 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 LSSP48449 732 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 RAB28P51157 221 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 IL2P60568 153 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 GABREP78334 506 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 CFHR1Q03591 330 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 CAMK2BQ13554 666 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 RTP5Q14D33 572 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 ACSBG2Q5FVE4 666 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms