RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 TTC27Q6P3X3 843 aa12.33□□□□□ -0.44
NPLOC4-213ENST00000573519 ZNF534Q76KX8 674 aa12.33□□□□□ -0.44
NPLOC4-213ENST00000573519 LDB1Q86U70 411 aaPredicted RBP12.33□□□□□ -0.44
NPLOC4-213ENST00000573519 HOOK3Q86VS8 718 aa12.33□□□□□ -0.44
NPLOC4-213ENST00000573519 BPHLQ86WA6 291 aaPredicted RBP12.33□□□□□ -0.44
NPLOC4-213ENST00000573519 CARFQ8N187 725 aa12.33□□□□□ -0.44
NPLOC4-213ENST00000573519 RASGEF1CQ8N431 466 aa12.33□□□□□ -0.44
NPLOC4-213ENST00000573519 OTUD6BQ8N6M0 293 aa12.33□□□□□ -0.44
NPLOC4-213ENST00000573519 CT55Q8WUE5 264 aa12.33□□□□□ -0.44
NPLOC4-213ENST00000573519 TSSK1BQ9BXA7 367 aa12.33□□□□□ -0.44
NPLOC4-213ENST00000573519 TFB2MQ9H5Q4 396 aaKnown RBP12.33□□□□□ -0.44
NPLOC4-213ENST00000573519 LHX9Q9NQ69 397 aa12.33□□□□□ -0.44
NPLOC4-213ENST00000573519 EIF2B3Q9NR50 452 aaKnown RBP12.33□□□□□ -0.44
NPLOC4-213ENST00000573519 C1GALT1Q9NS00 363 aa12.33□□□□□ -0.44
NPLOC4-213ENST00000573519 KCND1Q9NSA2 647 aa12.33□□□□□ -0.44
NPLOC4-213ENST00000573519 CATSPERZQ9NTU4 200 aa12.33□□□□□ -0.44
NPLOC4-213ENST00000573519 KCND3Q9UK17 655 aa12.33□□□□□ -0.44
NPLOC4-213ENST00000573519 TTC7AQ9ULT0 858 aaPredicted RBP12.33□□□□□ -0.44
NPLOC4-213ENST00000573519 PYCARDQ9ULZ3 195 aa12.33□□□□□ -0.44
NPLOC4-213ENST00000573519 PYCARD-AS1I3L0S3 204 aa12.32□□□□□ -0.44
NPLOC4-213ENST00000573519 J3QKU1 62 aa12.32□□□□□ -0.44
NPLOC4-213ENST00000573519 KIF5CO60282 957 aa12.32□□□□□ -0.44
NPLOC4-213ENST00000573519 CPNE3O75131 537 aaKnown RBP12.32□□□□□ -0.44
NPLOC4-213ENST00000573519 ST6GAL1P15907 406 aa12.32□□□□□ -0.44
NPLOC4-213ENST00000573519 SHMT2P34897 504 aa12.32□□□□□ -0.44
NPLOC4-213ENST00000573519 ACVR1Q04771 509 aa12.32□□□□□ -0.44
NPLOC4-213ENST00000573519 HSPA14Q0VDF9 509 aa12.32□□□□□ -0.44
NPLOC4-213ENST00000573519 KCNAB2Q13303 367 aa12.32□□□□□ -0.44
NPLOC4-213ENST00000573519 DNASE1L3Q13609 305 aa12.32□□□□□ -0.44
NPLOC4-213ENST00000573519 AARS2Q5JTZ9 985 aaKnown RBP12.32□□□□□ -0.44
NPLOC4-213ENST00000573519 FAM199XQ6PEV8 388 aaPredicted RBP12.32□□□□□ -0.44
NPLOC4-213ENST00000573519 MAGOHBQ96A72 148 aaKnown RBP12.32□□□□□ -0.44
NPLOC4-213ENST00000573519 ZNF501Q96CX3 271 aaPredicted RBP12.32□□□□□ -0.44
NPLOC4-213ENST00000573519 FCRL4Q96PJ5 515 aa12.32□□□□□ -0.44
NPLOC4-213ENST00000573519 OSBPL9Q96SU4 736 aa12.32□□□□□ -0.44
NPLOC4-213ENST00000573519 SLC7A5P2Q9GIP4 190 aa12.32□□□□□ -0.44
NPLOC4-213ENST00000573519 TWSG1Q9GZX9 223 aa12.32□□□□□ -0.44
NPLOC4-213ENST00000573519 HOMER3Q9NSC5 361 aa12.32□□□□□ -0.44
NPLOC4-213ENST00000573519 GEMIN8Q9NWZ8 242 aaKnown RBP12.32□□□□□ -0.44
NPLOC4-213ENST00000573519 ACTR10Q9NZ32 417 aa12.32□□□□□ -0.44
NPLOC4-213ENST00000573519 BFARQ9NZS9 450 aa12.32□□□□□ -0.44
NPLOC4-213ENST00000573519 PLAGL1Q9UM63 463 aa12.32□□□□□ -0.44
NPLOC4-213ENST00000573519 ICKQ9UPZ9 632 aa12.32□□□□□ -0.44
NPLOC4-213ENST00000573519 BTRCQ9Y297 605 aa12.32□□□□□ -0.44
NPLOC4-213ENST00000573519 SLC5A10A0PJK1 596 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 PIPSLA2A3N6 862 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 CDC14CA4D256 554 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 IQCF5A8MTL0 148 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 TMEM150CB9EJG8 249 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 BHMG1C9JSJ3 638 aaPredicted RBP12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 AP3B1O00203 1094 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 ZNF185O15231 689 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 CD3EAPO15446 510 aaKnown RBP12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 PVRP15151 417 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 MGAT1P26572 445 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 NMBRP28336 390 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 NPY2RP49146 381 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 PLOD1Q02809 727 aaPredicted RBP12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 PTRHD1Q6GMV3 140 aaKnown RBP12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 CES3Q6UWW8 571 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 UNC5AQ6ZN44 842 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 TBC1D21Q8IYX1 336 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 ADGRF3Q8IZF5 1079 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 KRT222Q8N1A0 295 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 OR8K5Q8NH50 307 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 OR5K2Q8NHB8 316 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 CFAP61Q8NHU2 1237 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 LKAAEAR1Q8TD35 194 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 APOBEC4Q8WW27 367 aaKnown RBP12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 N4BP2L2Q92802 583 aaPredicted RBP12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 PEX13Q92968 403 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 MR1Q95460 341 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 CLIP3Q96DZ5 547 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 TRAPPC9Q96Q05 1148 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 IL22Q9GZX6 179 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 SLC25A18Q9H1K4 315 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 ADNPQ9H2P0 1102 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 AKIRIN1Q9H9L7 192 aaPredicted RBP12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 STARD5Q9NSY2 213 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 SYBUQ9NX95 663 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 MARCH4Q9P2E8 410 aaPredicted RBP12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 POLG2Q9UHN1 485 aa12.31□□□□□ -0.44
NPLOC4-213ENST00000573519 TCRBV7S3A2A0A539 114 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 ISM1B1AKI9 464 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 PGRMC1O00264 195 aaKnown RBP12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 TERTO14746 1132 aaKnown RBP12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 KDM1AO60341 852 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 NDUFS3O75489 264 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 CREG1O75629 220 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 ZIC2O95409 532 aaPredicted RBP12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 KRT14P02533 472 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 APOA4P06727 396 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 KLK3P07288 261 aaPredicted RBP12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 CHRM5P08912 532 aaPredicted RBP12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 TPSB2P20231 275 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 CYP2A7P20853 494 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 ACADLP28330 430 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 CCR7P32248 378 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 COILP38432 576 aaPredicted RBP12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 TTPAP49638 278 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms