RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 P2RY12Q9H244 342 aa16.79■□□□□ 0.28
SMG6-212ENST00000573153 KCNF1Q9H3M0 494 aa16.79■□□□□ 0.28
SMG6-212ENST00000573153 LHX9Q9NQ69 397 aa16.79■□□□□ 0.28
SMG6-212ENST00000573153 LATS2Q9NRM7 1088 aa16.79■□□□□ 0.28
SMG6-212ENST00000573153 C1GALT1Q9NS00 363 aa16.79■□□□□ 0.28
SMG6-212ENST00000573153 RARRES3Q9UL19 164 aa16.79■□□□□ 0.28
SMG6-212ENST00000573153 SLC9B1P1A6NJY1 282 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 F8W8V4 182 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 MATN2O00339 956 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 IFRD1O00458 451 aaPredicted RBP16.78■□□□□ 0.28
SMG6-212ENST00000573153 HCRTR1O43613 425 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 GPC4O75487 556 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 PRKAR1AP10644 381 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 PVRP15151 417 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 NMBRP28336 390 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 DLSTP36957 453 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 PPARGP37231 505 aaPredicted RBP16.78■□□□□ 0.28
SMG6-212ENST00000573153 POLE2P56282 527 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 TUBB4BP68371 445 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 ACY1Q03154 408 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 GPS2Q13227 327 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 TUBB2AQ13885 445 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 KCNJ11Q14654 390 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 GSE1Q14687 1217 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 ZIC1Q15915 447 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 AARS2Q5JTZ9 985 aaKnown RBP16.78■□□□□ 0.28
SMG6-212ENST00000573153 LCN10Q6JVE6 187 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 BORAQ6PGQ7 559 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 ZNF605Q86T29 641 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 TMEM135Q86UB9 458 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 RASGRP3Q8IV61 690 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 MPP5Q8N3R9 675 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 ACTRT1Q8TDG2 376 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 LCN9Q8WX39 176 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 ELMO1Q92556 727 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 TUBB2BQ9BVA1 445 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 KIFC1Q9BW19 673 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 AP1M1Q9BXS5 423 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 SPHK1Q9NYA1 384 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 BFARQ9NZS9 450 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 LNPEPQ9UIQ6 1025 aa16.78■□□□□ 0.28
SMG6-212ENST00000573153 FER1L5A0AVI2 2057 aa16.77■□□□□ 0.28
SMG6-212ENST00000573153 UBA6A0AVT1 1052 aaPredicted RBP16.77■□□□□ 0.28
SMG6-212ENST00000573153 IQCF5A8MTL0 148 aa16.77■□□□□ 0.28
SMG6-212ENST00000573153 OR56A5P0C7T3 313 aa16.77■□□□□ 0.28
SMG6-212ENST00000573153 SPTBP11277 2137 aa16.77■□□□□ 0.28
SMG6-212ENST00000573153 RORAP35398 523 aa16.77■□□□□ 0.28
SMG6-212ENST00000573153 SESN2P58004 480 aaPredicted RBP16.77■□□□□ 0.28
SMG6-212ENST00000573153 PRAMEP78395 509 aa16.77■□□□□ 0.28
SMG6-212ENST00000573153 NFATC3Q12968 1075 aa16.77■□□□□ 0.28
SMG6-212ENST00000573153 PRKG2Q13237 762 aa16.77■□□□□ 0.28
SMG6-212ENST00000573153 DNASE1L3Q13609 305 aa16.77■□□□□ 0.28
SMG6-212ENST00000573153 FASTKD1Q53R41 847 aaKnown RBP16.77■□□□□ 0.28
SMG6-212ENST00000573153 BPHLQ86WA6 291 aaPredicted RBP16.77■□□□□ 0.28
SMG6-212ENST00000573153 AMIGO1Q86WK6 493 aa16.77■□□□□ 0.28
SMG6-212ENST00000573153 OR6P1Q8NGX9 317 aa16.77■□□□□ 0.28
SMG6-212ENST00000573153 OR1L3Q8NH93 324 aa16.77■□□□□ 0.28
SMG6-212ENST00000573153 KIAA1143Q96AT1 154 aaPredicted RBP16.77■□□□□ 0.28
SMG6-212ENST00000573153 PDLIM2Q96JY6 352 aa16.77■□□□□ 0.28
SMG6-212ENST00000573153 TRAPPC9Q96Q05 1148 aa16.77■□□□□ 0.28
SMG6-212ENST00000573153 OR2A14Q96R47 310 aa16.77■□□□□ 0.28
SMG6-212ENST00000573153 ADNPQ9H2P0 1102 aa16.77■□□□□ 0.28
SMG6-212ENST00000573153 SRMSQ9H3Y6 488 aa16.77■□□□□ 0.28
SMG6-212ENST00000573153 PDE7BQ9NP56 450 aa16.77■□□□□ 0.28
SMG6-212ENST00000573153 SYBUQ9NX95 663 aa16.77■□□□□ 0.28
SMG6-212ENST00000573153 SNRNP200O75643 2136 aaKnown RBP16.76■□□□□ 0.27
SMG6-212ENST00000573153 PYCARD-AS1I3L0S3 204 aa16.76■□□□□ 0.27
SMG6-212ENST00000573153 PGRMC1O00264 195 aaKnown RBP16.76■□□□□ 0.27
SMG6-212ENST00000573153 TMEM63AO94886 807 aa16.76■□□□□ 0.27
SMG6-212ENST00000573153 NTRK1P04629 796 aa16.76■□□□□ 0.27
SMG6-212ENST00000573153 CAPN1P07384 714 aa16.76■□□□□ 0.27
SMG6-212ENST00000573153 CTSBP07858 339 aa16.76■□□□□ 0.27
SMG6-212ENST00000573153 TTPAP49638 278 aa16.76■□□□□ 0.27
SMG6-212ENST00000573153 BRD3Q15059 726 aa16.76■□□□□ 0.27
SMG6-212ENST00000573153 ANKRD22Q5VYY1 191 aa16.76■□□□□ 0.27
SMG6-212ENST00000573153 ZNF385CQ66K41 422 aaPredicted RBP16.76■□□□□ 0.27
SMG6-212ENST00000573153 FAM199XQ6PEV8 388 aaPredicted RBP16.76■□□□□ 0.27
SMG6-212ENST00000573153 UNC5AQ6ZN44 842 aa16.76■□□□□ 0.27
SMG6-212ENST00000573153 TBC1D21Q8IYX1 336 aa16.76■□□□□ 0.27
SMG6-212ENST00000573153 SLC22A15Q8IZD6 547 aa16.76■□□□□ 0.27
SMG6-212ENST00000573153 AGGF1Q8N302 714 aaeCLIP16.76■□□□□ 0.27
SMG6-212ENST00000573153 SLC35F6Q8N357 371 aa16.76■□□□□ 0.27
SMG6-212ENST00000573153 OR5K2Q8NHB8 316 aa16.76■□□□□ 0.27
SMG6-212ENST00000573153 MFSD3Q96ES6 412 aa16.76■□□□□ 0.27
SMG6-212ENST00000573153 STAMBPL1Q96FJ0 436 aa16.76■□□□□ 0.27
SMG6-212ENST00000573153 MS4A14Q96JA4 679 aa16.76■□□□□ 0.27
SMG6-212ENST00000573153 LRFN5Q96NI6 719 aa16.76■□□□□ 0.27
SMG6-212ENST00000573153 CATSPER2Q96P56 530 aa16.76■□□□□ 0.27
SMG6-212ENST00000573153 OSBPL9Q96SU4 736 aa16.76■□□□□ 0.27
SMG6-212ENST00000573153 TRIM56Q9BRZ2 755 aaKnown RBP16.76■□□□□ 0.27
SMG6-212ENST00000573153 EFHD1Q9BUP0 239 aa16.76■□□□□ 0.27
SMG6-212ENST00000573153 CARD6Q9BX69 1037 aa16.76■□□□□ 0.27
SMG6-212ENST00000573153 FAM60AQ9NP50 221 aa16.76■□□□□ 0.27
SMG6-212ENST00000573153 CATSPERZQ9NTU4 200 aa16.76■□□□□ 0.27
SMG6-212ENST00000573153 ACTR10Q9NZ32 417 aa16.76■□□□□ 0.27
SMG6-212ENST00000573153 TUBD1Q9UJT1 453 aa16.76■□□□□ 0.27
SMG6-212ENST00000573153 KRT14P02533 472 aa16.75■□□□□ 0.27
SMG6-212ENST00000573153 MLNP12872 115 aa16.75■□□□□ 0.27
SMG6-212ENST00000573153 CDH3P22223 829 aa16.75■□□□□ 0.27
SMG6-212ENST00000573153 MGAT1P26572 445 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms