RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 THRAP10827 490 aa15.39■□□□□ 0.05
CHD3-215ENST00000572750 CHRM3P20309 590 aa15.39■□□□□ 0.05
CHD3-215ENST00000572750 ACADLP28330 430 aa15.39■□□□□ 0.05
CHD3-215ENST00000572750 GABRB3P28472 473 aa15.39■□□□□ 0.05
CHD3-215ENST00000572750 SSTR1P30872 391 aa15.39■□□□□ 0.05
CHD3-215ENST00000572750 LEPRP48357 1165 aaKnown RBP15.39■□□□□ 0.05
CHD3-215ENST00000572750 PPP1CAP62136 330 aa15.39■□□□□ 0.05
CHD3-215ENST00000572750 GABREP78334 506 aa15.39■□□□□ 0.05
CHD3-215ENST00000572750 ZFP36L1Q07352 338 aaKnown RBP15.39■□□□□ 0.05
CHD3-215ENST00000572750 PRKG2Q13237 762 aa15.39■□□□□ 0.05
CHD3-215ENST00000572750 FRG1Q14331 258 aaKnown RBP15.39■□□□□ 0.05
CHD3-215ENST00000572750 CLPPQ16740 277 aaPredicted RBP15.39■□□□□ 0.05
CHD3-215ENST00000572750 SNAP47Q5SQN1 464 aa15.39■□□□□ 0.05
CHD3-215ENST00000572750 TEDDM1Q5T9Z0 273 aa15.39■□□□□ 0.05
CHD3-215ENST00000572750 FOXR1Q6PIV2 292 aa15.39■□□□□ 0.05
CHD3-215ENST00000572750 WDR74Q6RFH5 385 aaPredicted RBP15.39■□□□□ 0.05
CHD3-215ENST00000572750 ZBTB2Q8N680 514 aa15.39■□□□□ 0.05
CHD3-215ENST00000572750 SIDT2Q8NBJ9 832 aaKnown RBP15.39■□□□□ 0.05
CHD3-215ENST00000572750 OR4D9Q8NGE8 314 aa15.39■□□□□ 0.05
CHD3-215ENST00000572750 GIMAP7Q8NHV1 300 aa15.39■□□□□ 0.05
CHD3-215ENST00000572750 GABPB2Q8TAK5 448 aaPredicted RBP15.39■□□□□ 0.05
CHD3-215ENST00000572750 C9orf72Q96LT7 481 aa15.39■□□□□ 0.05
CHD3-215ENST00000572750 SLC30A3Q99726 388 aa15.39■□□□□ 0.05
CHD3-215ENST00000572750 PHACTR1Q9C0D0 580 aa15.39■□□□□ 0.05
CHD3-215ENST00000572750 STRADBQ9C0K7 418 aa15.39■□□□□ 0.05
CHD3-215ENST00000572750 EPB41L1Q9H4G0 881 aa15.39■□□□□ 0.05
CHD3-215ENST00000572750 FAM114A2Q9NRY5 505 aa15.39■□□□□ 0.05
CHD3-215ENST00000572750 ZFATQ9P243 1243 aa15.39■□□□□ 0.05
CHD3-215ENST00000572750 ASF1AQ9Y294 204 aa15.39■□□□□ 0.05
CHD3-215ENST00000572750 PSAT1Q9Y617 370 aa15.39■□□□□ 0.05
CHD3-215ENST00000572750 COLEC10Q9Y6Z7 277 aa15.39■□□□□ 0.05
CHD3-215ENST00000572750 MN1Q10571 1320 aaPredicted RBP15.39■□□□□ 0.05
CHD3-215ENST00000572750 CCDC187A0A096LP49 1063 aa15.38■□□□□ 0.05
CHD3-215ENST00000572750 KPNA5O15131 536 aa15.38■□□□□ 0.05
CHD3-215ENST00000572750 ZNF500O60304 480 aaPredicted RBP15.38■□□□□ 0.05
CHD3-215ENST00000572750 SLCO2B1O94956 709 aa15.38■□□□□ 0.05
CHD3-215ENST00000572750 HGFP14210 728 aa15.38■□□□□ 0.05
CHD3-215ENST00000572750 AMD1P17707 334 aa15.38■□□□□ 0.05
CHD3-215ENST00000572750 NDUFS1P28331 727 aa15.38■□□□□ 0.05
CHD3-215ENST00000572750 CLCN7P51798 805 aa15.38■□□□□ 0.05
CHD3-215ENST00000572750 LIMK2P53671 638 aa15.38■□□□□ 0.05
CHD3-215ENST00000572750 PLOD1Q02809 727 aaPredicted RBP15.38■□□□□ 0.05
CHD3-215ENST00000572750 MGAT5Q09328 741 aa15.38■□□□□ 0.05
CHD3-215ENST00000572750 SQSTM1Q13501 440 aa15.38■□□□□ 0.05
CHD3-215ENST00000572750 CUL1Q13616 776 aa15.38■□□□□ 0.05
CHD3-215ENST00000572750 C16orf72Q14CZ0 275 aa15.38■□□□□ 0.05
CHD3-215ENST00000572750 GLE1Q53GS7 698 aaKnown RBP15.38■□□□□ 0.05
CHD3-215ENST00000572750 DNTTIP2Q5QJE6 756 aaKnown RBP15.38■□□□□ 0.05
CHD3-215ENST00000572750 RBM20Q5T481 1227 aaKnown RBP15.38■□□□□ 0.05
CHD3-215ENST00000572750 TMEM71Q6P5X7 295 aa15.38■□□□□ 0.05
CHD3-215ENST00000572750 KIAA0408Q6ZU52 694 aa15.38■□□□□ 0.05
CHD3-215ENST00000572750 PALM2Q8IXS6 379 aa15.38■□□□□ 0.05
CHD3-215ENST00000572750 ACVR1CQ8NER5 493 aa15.38■□□□□ 0.05
CHD3-215ENST00000572750 OR52E1Q8NGJ3 308 aa15.38■□□□□ 0.05
CHD3-215ENST00000572750 CFAP61Q8NHU2 1237 aa15.38■□□□□ 0.05
CHD3-215ENST00000572750 SKA2Q8WVK7 121 aaPredicted RBP15.38■□□□□ 0.05
CHD3-215ENST00000572750 IFT81Q8WYA0 676 aa15.38■□□□□ 0.05
CHD3-215ENST00000572750 SLC39A7Q92504 469 aa15.38■□□□□ 0.05
CHD3-215ENST00000572750 KCNJ9Q92806 393 aa15.38■□□□□ 0.05
CHD3-215ENST00000572750 LIN37Q96GY3 246 aaPredicted RBP15.38■□□□□ 0.05
CHD3-215ENST00000572750 TGM7Q96PF1 710 aa15.38■□□□□ 0.05
CHD3-215ENST00000572750 AARSD1Q9BTE6 412 aaKnown RBP15.38■□□□□ 0.05
CHD3-215ENST00000572750 TRIT1Q9H3H1 467 aaKnown RBP15.38■□□□□ 0.05
CHD3-215ENST00000572750 MVB12BQ9H7P6 319 aa15.38■□□□□ 0.05
CHD3-215ENST00000572750 L2HGDHQ9H9P8 463 aa15.38■□□□□ 0.05
CHD3-215ENST00000572750 MOCS1Q9NZB8 636 aa15.38■□□□□ 0.05
CHD3-215ENST00000572750 TCRBV9S1A1TA0A576 114 aa15.37■□□□□ 0.05
CHD3-215ENST00000572750 A8MU76 341 aa15.37■□□□□ 0.05
CHD3-215ENST00000572750 CAPN5O15484 640 aaPredicted RBP15.37■□□□□ 0.05
CHD3-215ENST00000572750 AHSGP02765 367 aa15.37■□□□□ 0.05
CHD3-215ENST00000572750 RHOXF2BP0C7M4 288 aa15.37■□□□□ 0.05
CHD3-215ENST00000572750 ECHS1P30084 290 aa15.37■□□□□ 0.05
CHD3-215ENST00000572750 MAGEA4P43358 317 aa15.37■□□□□ 0.05
CHD3-215ENST00000572750 GPX6P59796 221 aa15.37■□□□□ 0.05
CHD3-215ENST00000572750 ABRQ12979 859 aa15.37■□□□□ 0.05
CHD3-215ENST00000572750 GBX1Q14549 363 aa15.37■□□□□ 0.05
CHD3-215ENST00000572750 PLEKHS1Q5SXH7 462 aa15.37■□□□□ 0.05
CHD3-215ENST00000572750 IRGCQ6NXR0 463 aa15.37■□□□□ 0.05
CHD3-215ENST00000572750 ZNF843Q8N446 348 aa15.37■□□□□ 0.05
CHD3-215ENST00000572750 OR5K2Q8NHB8 316 aa15.37■□□□□ 0.05
CHD3-215ENST00000572750 LCN9Q8WX39 176 aa15.37■□□□□ 0.05
CHD3-215ENST00000572750 UBL7Q96S82 380 aaPredicted RBP15.37■□□□□ 0.05
CHD3-215ENST00000572750 GPR21Q99679 349 aa15.37■□□□□ 0.05
CHD3-215ENST00000572750 DPYSL5Q9BPU6 564 aa15.37■□□□□ 0.05
CHD3-215ENST00000572750 RHOXF2Q9BQY4 288 aa15.37■□□□□ 0.05
CHD3-215ENST00000572750 NRSN2Q9GZP1 204 aa15.37■□□□□ 0.05
CHD3-215ENST00000572750 XKR8Q9H6D3 395 aa15.37■□□□□ 0.05
CHD3-215ENST00000572750 SMYD2Q9NRG4 433 aa15.37■□□□□ 0.05
CHD3-215ENST00000572750 CIDEBQ9UHD4 219 aa15.37■□□□□ 0.05
CHD3-215ENST00000572750 PLAGL1Q9UM63 463 aa15.37■□□□□ 0.05
CHD3-215ENST00000572750 TDRKHQ9Y2W6 561 aaKnown RBP15.37■□□□□ 0.05
CHD3-215ENST00000572750 LOXL2Q9Y4K0 774 aa15.37■□□□□ 0.05
CHD3-215ENST00000572750 NFS1Q9Y697 457 aa15.37■□□□□ 0.05
CHD3-215ENST00000572750 AK5Q9Y6K8 562 aa15.37■□□□□ 0.05
CHD3-215ENST00000572750 PTPN13Q12923 2485 aa15.37■□□□□ 0.05
CHD3-215ENST00000572750 KRT87PA6NCN2 255 aa15.36■□□□□ 0.05
CHD3-215ENST00000572750 OR6C74A6NCV1 312 aa15.36■□□□□ 0.05
CHD3-215ENST00000572750 OR5K3A6NET4 321 aa15.36■□□□□ 0.05
CHD3-215ENST00000572750 ESPNB1AK53 854 aa15.36■□□□□ 0.05
CHD3-215ENST00000572750 TMX2-CTNND1H3BSU7 103 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms