RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 C21orf140B9A014 251 aa12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 LIN7AO14910 233 aaPredicted RBP12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 CPNE3O75131 537 aaKnown RBP12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 SCRG1O75711 98 aa12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 APRTP07741 180 aa12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 CCDC175P0C221 793 aa12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 F8A1P23610 371 aa12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 PSMA3P25788 255 aa12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 PDHA2P29803 388 aa12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 FOXN2P32314 431 aa12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 NFKB2Q00653 900 aa12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 SEMA5AQ13591 1074 aa12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 DNASE1L3Q13609 305 aa12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 BOP1Q14137 746 aaKnown RBP12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 GPR19Q15760 415 aa12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 ATP1A1-AS1Q5TC04 95 aa12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 LYPLAL1Q5VWZ2 237 aa12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 ATG14Q6ZNE5 492 aa12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 NLRP9Q7RTR0 991 aa12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 OR52E1Q8NGJ3 308 aa12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 OR13J1Q8NGT2 312 aa12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 CT55Q8WUE5 264 aa12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 ELMO1Q92556 727 aa12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 TFGQ92734 400 aaPredicted RBP12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 PPM1MQ96MI6 270 aa12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 RANBP9Q96S59 729 aa12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 TLR10Q9BXR5 811 aa12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 LZTFL1Q9NQ48 299 aa12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 LHX9Q9NQ69 397 aa12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 C1GALT1Q9NS00 363 aa12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 BTRCQ9Y297 605 aa12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 PRSS21Q9Y6M0 314 aa12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 FLNBO75369 2602 aaKnown RBP12.01□□□□□ -0.49
CTDNEP1-205ENST00000570828 SLC9B1P1A6NJY1 282 aa12□□□□□ -0.49
CTDNEP1-205ENST00000570828 C2orf74A8MZ97 194 aa12□□□□□ -0.49
CTDNEP1-205ENST00000570828 BTN3A1O00481 513 aa12□□□□□ -0.49
CTDNEP1-205ENST00000570828 TERTO14746 1132 aaKnown RBP12□□□□□ -0.49
CTDNEP1-205ENST00000570828 GOT2P00505 430 aaKnown RBP12□□□□□ -0.49
CTDNEP1-205ENST00000570828 NTRK1P04629 796 aa12□□□□□ -0.49
CTDNEP1-205ENST00000570828 OR56A5P0C7T3 313 aa12□□□□□ -0.49
CTDNEP1-205ENST00000570828 ETS1P14921 441 aa12□□□□□ -0.49
CTDNEP1-205ENST00000570828 ADRA1DP25100 572 aa12□□□□□ -0.49
CTDNEP1-205ENST00000570828 GRIA1P42261 906 aa12□□□□□ -0.49
CTDNEP1-205ENST00000570828 PRAMEP78395 509 aa12□□□□□ -0.49
CTDNEP1-205ENST00000570828 PRKG2Q13237 762 aa12□□□□□ -0.49
CTDNEP1-205ENST00000570828 ERV3-1Q14264 604 aa12□□□□□ -0.49
CTDNEP1-205ENST00000570828 TSTD2Q5T7W7 516 aa12□□□□□ -0.49
CTDNEP1-205ENST00000570828 FBXO38Q6PIJ6 1188 aa12□□□□□ -0.49
CTDNEP1-205ENST00000570828 PRUNE1Q86TP1 453 aa12□□□□□ -0.49
CTDNEP1-205ENST00000570828 HOOK3Q86VS8 718 aa12□□□□□ -0.49
CTDNEP1-205ENST00000570828 AMIGO1Q86WK6 493 aa12□□□□□ -0.49
CTDNEP1-205ENST00000570828 PHC3Q8NDX5 983 aa12□□□□□ -0.49
CTDNEP1-205ENST00000570828 PPHLN1Q8NEY8 458 aaKnown RBP12□□□□□ -0.49
CTDNEP1-205ENST00000570828 OR6P1Q8NGX9 317 aa12□□□□□ -0.49
CTDNEP1-205ENST00000570828 C9orf43Q8TAL5 461 aaPredicted RBP12□□□□□ -0.49
CTDNEP1-205ENST00000570828 MAIP1Q8WWC4 291 aa12□□□□□ -0.49
CTDNEP1-205ENST00000570828 HDAC10Q969S8 669 aa12□□□□□ -0.49
CTDNEP1-205ENST00000570828 ZNF501Q96CX3 271 aaPredicted RBP12□□□□□ -0.49
CTDNEP1-205ENST00000570828 TFB2MQ9H5Q4 396 aaKnown RBP12□□□□□ -0.49
CTDNEP1-205ENST00000570828 CASS4Q9NQ75 786 aa12□□□□□ -0.49
CTDNEP1-205ENST00000570828 KCND1Q9NSA2 647 aa12□□□□□ -0.49
CTDNEP1-205ENST00000570828 SLC2A6Q9UGQ3 507 aa12□□□□□ -0.49
CTDNEP1-205ENST00000570828 RIMKLBQ9ULI2 386 aa12□□□□□ -0.49
CTDNEP1-205ENST00000570828 POLHQ9Y253 713 aa12□□□□□ -0.49
CTDNEP1-205ENST00000570828 ASF1AQ9Y294 204 aa12□□□□□ -0.49
CTDNEP1-205ENST00000570828 TCAF1Q9Y4C2 921 aa12□□□□□ -0.49
CTDNEP1-205ENST00000570828 PCDHGA6Q9Y5G7 932 aa12□□□□□ -0.49
CTDNEP1-205ENST00000570828 ASH1LQ9NR48 2969 aaKnown RBP12□□□□□ -0.49
CTDNEP1-205ENST00000570828 PIPSLA2A3N6 862 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 CDC14CA4D256 554 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 PYCARD-AS1I3L0S3 204 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 BTN3A3O00478 584 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 NRDCO43847 1150 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 CREG1O75629 220 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 ZIC2O95409 532 aaPredicted RBP11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 FGGP02679 453 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 PRDX3P30048 256 aaKnown RBP11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 SHMT2P34897 504 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 PPARGP37231 505 aaPredicted RBP11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 BASP1P80723 227 aaKnown RBP11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 PLOD1Q02809 727 aaPredicted RBP11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 BRD3Q15059 726 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 CCNG2Q16589 344 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 FASTKD1Q53R41 847 aaKnown RBP11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 AARS2Q5JTZ9 985 aaKnown RBP11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 ZNF662Q6ZS27 426 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 GSTA5Q7RTV2 222 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 GLIS1Q8NBF1 620 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 TRIM58Q8NG06 486 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 OR5AR1Q8NGP9 310 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 OR4L1Q8NH43 312 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 SEC14L1Q92503 715 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 CPT1BQ92523 772 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 TSSK1BQ9BXA7 367 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 GPR87Q9BY21 358 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 PITPNM3Q9BZ71 974 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 TRIM4Q9C037 500 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 TWSG1Q9GZX9 223 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 ACTL8Q9H568 366 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 XKR8Q9H6D3 395 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms