RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	SIDT1	Q9NXL6	827 aa	Known RBP	10.08	□□□□□ -0.8
UBR1-207	ENST00000568782	SERTAD3	Q9UJW9	196 aa		10.08	□□□□□ -0.8
UBR1-207	ENST00000568782	RPS6KL1	Q9Y6S9	549 aa		10.08	□□□□□ -0.8
UBR1-207	ENST00000568782	SDR42E2	A6NKP2	422 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782		E5RI56	91 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	OR1I1	O60431	355 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	CPNE3	O75131	537 aa	Known RBP	10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	PHF2	O75151	1096 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	KATNA1	O75449	491 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	VAPB	O95292	243 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	HBQ1	P09105	142 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	EBLN1	P0CF75	366 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	MLN	P12872	115 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	ITGB6	P18564	788 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	PRDX3	P30048	256 aa	Known RBP	10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	CCR10	P46092	362 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	ARCN1	P48444	511 aa	Known RBP	10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	FNTA	P49354	379 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	EIF3B	P55884	814 aa	Known RBP	10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	RPS15	P62841	145 aa	Known RBP	10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	CRADD	P78560	199 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	BORA	Q6PGQ7	559 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	ZNF605	Q86T29	641 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	GPR135	Q8IZ08	494 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	D2HGDH	Q8N465	521 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	GALNT6	Q8NCL4	622 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	OR5K2	Q8NHB8	316 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	CFAP61	Q8NHU2	1237 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	TTC9	Q92623	222 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	RUNDC3B	Q96NL0	473 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	BBC3	Q96PG8	261 aa	Predicted RBP	10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	KIFC1	Q9BW19	673 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	RAB11FIP5	Q9BXF6	653 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	FAM117A	Q9C073	453 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	SYBU	Q9NX95	663 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	OR6C2	Q9NZP2	312 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	SEMA5B	Q9P283	1151 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	POMT2	Q9UKY4	750 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	SLC39A10	Q9ULF5	831 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	SOX13	Q9UN79	622 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	HEMK1	Q9Y5R4	338 aa	Predicted RBP	10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	PRSS21	Q9Y6M0	314 aa		10.07	□□□□□ -0.8
UBR1-207	ENST00000568782	LOC101059948	A0A1B0GTJ6	334 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	SLC5A10	A0PJK1	596 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	CTAGE9	A4FU28	777 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	SLC9B1P1	A6NJY1	282 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	ISM1	B1AKI9	464 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	BTN3A1	O00481	513 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	SCRG1	O75711	98 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	DLGAP3	O95886	979 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	FOLR1	P15328	257 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	CHRM3	P20309	590 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	CYP2A7	P20853	494 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	NMBR	P28336	390 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	STAT5A	P42229	794 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	PAFAH1B1	P43034	410 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	KPNA2	P52292	529 aa	Known RBP	10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	PPP1CA	P62136	330 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	ABR	Q12979	859 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	SRSF6	Q13247	344 aa	Known RBP	10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	DHX34	Q14147	1143 aa	Known RBP	10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	LY6D	Q14210	128 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	KCNAB1	Q14722	419 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	CYP1B1	Q16678	543 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	C16orf46	Q6P387	395 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	UNC5D	Q6UXZ4	953 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	LDB1	Q86U70	411 aa	Predicted RBP	10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	REXO1L1P	Q8IX06	675 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	UNC5B	Q8IZJ1	945 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	MCU	Q8NE86	351 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	OR5AR1	Q8NGP9	310 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	CALML6	Q8TD86	181 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	STARD8	Q92502	1023 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	CPT1B	Q92523	772 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	EXTL1	Q92935	676 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	CLIP3	Q96DZ5	547 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	MFSD3	Q96ES6	412 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	LHX9	Q9NQ69	397 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	TREX1	Q9NSU2	369 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	INTS7	Q9NVH2	962 aa	Known RBP	10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	IRAK4	Q9NWZ3	460 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	ACTR10	Q9NZ32	417 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	ASIC3	Q9UHC3	531 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	SNX12	Q9UMY4	172 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	BTRC	Q9Y297	605 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	MAD1L1	Q9Y6D9	718 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	LAMA5	O15230	3695 aa		10.06	□□□□□ -0.8
UBR1-207	ENST00000568782	C21orf140	B9A014	251 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	TMEM150C	B9EJG8	249 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782		E7EQ34	232 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	GOLGA8M	H3BSY2	632 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	BTN3A3	O00478	584 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	ESR1	P03372	595 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	NTRK1	P04629	796 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	PRKAR1A	P10644	381 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	OGN	P20774	298 aa	Known RBP	10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	AGXT	P21549	392 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	RPS3	P23396	243 aa	Known RBP eCLIP	10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	AOAH	P28039	575 aa		10.05	□□□□□ -0.8

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