RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 SVILO95425 2214 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 MTORP42345 2549 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 A0A1B0GTH6 734 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 H3BMH7 237 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 IFRD1O00458 451 aaPredicted RBP11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 STX7O15400 261 aaKnown RBP11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 SGTAO43765 313 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 UMODP07911 640 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 ATXN8OSP0DMR3 200 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 RALBP11234 206 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 CD68P34810 354 aaPredicted RBP11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 PTGER4P35408 488 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 PRLHRP49683 370 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 ART3Q13508 389 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 SLC9A5Q14940 896 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 TLR1Q15399 786 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 SLC1A5Q15758 541 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 NKAIN1Q4KMZ8 207 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 AGAP7PQ5VUJ5 663 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 PRAMEF13Q5VWM6 474 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 FCRL6Q6DN72 434 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 MRPL14Q6P1L8 145 aaKnown RBP11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 SPESP1Q6UW49 350 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 FAM180AQ6UWF9 173 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 DNAJB14Q8TBM8 379 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 NAT14Q8WUY8 206 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 DCUN1D1Q96GG9 259 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 RBM41Q96IZ5 413 aaKnown RBP11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 AGAP4Q96P64 663 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 SLX1AQ9BQ83 275 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 NAT10Q9H0A0 1025 aaKnown RBP11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 EPS8L2Q9H6S3 715 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 MVB12BQ9H7P6 319 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 FAM60AQ9NP50 221 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 DHCR7Q9UBM7 475 aaKnown RBP11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 FBXL4Q9UKA2 621 aa11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 KLF2Q9Y5W3 355 aaPredicted RBP11.4□□□□□ -0.58
GTF3C1-209ENST00000568569 PDZD2O15018 2839 aa11.4□□□□□ -0.59
GTF3C1-209ENST00000568569 C3orf70A6NLC5 250 aaPredicted RBP11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 CNOT3O75175 753 aaKnown RBP11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 SRP72O76094 671 aaKnown RBP11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 NFKB1P19838 968 aa11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 MMP11P24347 488 aa11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 FOXL2P58012 376 aa11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 PRKD1Q15139 912 aaPredicted RBP11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 DEFB110Q30KQ9 67 aa11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 TLDC1Q6P9B6 456 aa11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 BZW1Q7L1Q6 419 aaKnown RBP11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 ADGRF3Q8IZF5 1079 aa11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 ZNF655Q8N720 491 aaPredicted RBP11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 IPMKQ8NFU5 416 aa11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 CTNNBL1Q8WYA6 563 aaPredicted RBP11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 CNDP1Q96KN2 507 aa11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 MRGPRX2Q96LB1 330 aa11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 NAP1L5Q96NT1 182 aaPredicted RBP11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 NRTNQ99748 197 aa11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 HGH1Q9BTY7 390 aa11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 FSD1LQ9BXM9 530 aa11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 CHRNA10Q9GZZ6 450 aa11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 SPRTNQ9H040 489 aaPredicted RBP11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 ASB8Q9H765 288 aa11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 COG4Q9H9E3 785 aa11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 SLC6A20Q9NP91 592 aa11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 OLAHQ9NV23 265 aa11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 IRAK4Q9NWZ3 460 aa11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 ARL5AQ9Y689 179 aa11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 HIVEP1P15822 2718 aa11.39□□□□□ -0.59
GTF3C1-209ENST00000568569 C17orf113A0A1B0GUU1 675 aa11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 CFAP99D6REC4 459 aa11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 H2AFZP0C0S5 128 aa11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 GABRA4P48169 554 aa11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 CD151P48509 253 aa11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 NR2C2P49116 596 aa11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 DYNLT1P63172 113 aa11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 OTUD4Q01804 1114 aaKnown RBP11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 WASHC5Q12768 1159 aa11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 MPP3Q13368 585 aa11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 PTPRCAPQ14761 206 aa11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 H2AFVQ71UI9 128 aa11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 TRIM73Q86UV7 250 aa11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 RFX6Q8HWS3 928 aa11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 PARP9Q8IXQ6 854 aa11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 BCORP1Q8N888 145 aa11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 TFB1MQ8WVM0 346 aaKnown RBP11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 RELTQ969Z4 430 aa11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 ULK4Q96C45 1275 aa11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 OXNAD1Q96HP4 312 aaPredicted RBP11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 LURAP1Q96LR2 239 aa11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 NDC1Q9BTX1 674 aa11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 OR52A5Q9H2C5 316 aa11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 XKR8Q9H6D3 395 aa11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 VPS37BQ9H9H4 285 aa11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 KLHL8Q9P2G9 620 aaPredicted RBP11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 CRLS1Q9UJA2 301 aa11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 CDC23Q9UJX2 597 aa11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 MDC1Q14676 2089 aaKnown RBP11.38□□□□□ -0.59
GTF3C1-209ENST00000568569 ITPR3Q14573 2671 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 PKDREJQ9NTG1 2253 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 C2orf81A6NN90 581 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 SMTNL1A8MU46 457 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms