RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 PPM1MQ96MI6 270 aa14.02□□□□□ -0.17
CMTM3-215ENST00000568477 ADNPQ9H2P0 1102 aa14.02□□□□□ -0.17
CMTM3-215ENST00000568477 FANCEQ9HB96 536 aa14.02□□□□□ -0.17
CMTM3-215ENST00000568477 GEMIN8Q9NWZ8 242 aaKnown RBP14.02□□□□□ -0.17
CMTM3-215ENST00000568477 ANAPC5Q9UJX4 755 aa14.02□□□□□ -0.17
CMTM3-215ENST00000568477 KCND3Q9UK17 655 aa14.02□□□□□ -0.17
CMTM3-215ENST00000568477 PADI1Q9ULC6 663 aa14.02□□□□□ -0.17
CMTM3-215ENST00000568477 ASF1AQ9Y294 204 aa14.02□□□□□ -0.17
CMTM3-215ENST00000568477 HEMK1Q9Y5R4 338 aaPredicted RBP14.02□□□□□ -0.17
CMTM3-215ENST00000568477 SLC5A10A0PJK1 596 aa14.01□□□□□ -0.17
CMTM3-215ENST00000568477 CTAGE9A4FU28 777 aa14.01□□□□□ -0.17
CMTM3-215ENST00000568477 C2orf74A8MZ97 194 aa14.01□□□□□ -0.17
CMTM3-215ENST00000568477 BTN3A3O00478 584 aa14.01□□□□□ -0.17
CMTM3-215ENST00000568477 FANCGO15287 622 aa14.01□□□□□ -0.17
CMTM3-215ENST00000568477 MAP3K7O43318 606 aa14.01□□□□□ -0.17
CMTM3-215ENST00000568477 KATNA1O75449 491 aa14.01□□□□□ -0.17
CMTM3-215ENST00000568477 ITGB6P18564 788 aa14.01□□□□□ -0.17
CMTM3-215ENST00000568477 F8A1P23610 371 aa14.01□□□□□ -0.17
CMTM3-215ENST00000568477 OAS2P29728 719 aaKnown RBP14.01□□□□□ -0.17
CMTM3-215ENST00000568477 PRDX3P30048 256 aaKnown RBP14.01□□□□□ -0.17
CMTM3-215ENST00000568477 KCNJ1P48048 391 aa14.01□□□□□ -0.17
CMTM3-215ENST00000568477 POLE2P56282 527 aa14.01□□□□□ -0.17
CMTM3-215ENST00000568477 DNASE1L3Q13609 305 aa14.01□□□□□ -0.17
CMTM3-215ENST00000568477 GPR19Q15760 415 aa14.01□□□□□ -0.17
CMTM3-215ENST00000568477 NAPRTQ6XQN6 538 aa14.01□□□□□ -0.17
CMTM3-215ENST00000568477 TMEM126BQ8IUX1 230 aa14.01□□□□□ -0.17
CMTM3-215ENST00000568477 SLC35F6Q8N357 371 aa14.01□□□□□ -0.17
CMTM3-215ENST00000568477 OR5AR1Q8NGP9 310 aa14.01□□□□□ -0.17
CMTM3-215ENST00000568477 CT55Q8WUE5 264 aa14.01□□□□□ -0.17
CMTM3-215ENST00000568477 ZNF501Q96CX3 271 aaPredicted RBP14.01□□□□□ -0.17
CMTM3-215ENST00000568477 TSSK1BQ9BXA7 367 aa14.01□□□□□ -0.17
CMTM3-215ENST00000568477 FAM117AQ9C073 453 aa14.01□□□□□ -0.17
CMTM3-215ENST00000568477 IL22Q9GZX6 179 aa14.01□□□□□ -0.17
CMTM3-215ENST00000568477 XKR8Q9H6D3 395 aa14.01□□□□□ -0.17
CMTM3-215ENST00000568477 LHX9Q9NQ69 397 aa14.01□□□□□ -0.17
CMTM3-215ENST00000568477 CHRAC1Q9NRG0 131 aa14.01□□□□□ -0.17
CMTM3-215ENST00000568477 STARD5Q9NSY2 213 aa14.01□□□□□ -0.17
CMTM3-215ENST00000568477 CATSPERZQ9NTU4 200 aa14.01□□□□□ -0.17
CMTM3-215ENST00000568477 BFARQ9NZS9 450 aa14.01□□□□□ -0.17
CMTM3-215ENST00000568477 PCDHB3Q9Y5E6 796 aa14.01□□□□□ -0.17
CMTM3-215ENST00000568477 MRPS18BQ9Y676 258 aaKnown RBP14.01□□□□□ -0.17
CMTM3-215ENST00000568477 UQCRHLA0A096LP55 91 aa14□□□□□ -0.17
CMTM3-215ENST00000568477 C21orf140B9A014 251 aa14□□□□□ -0.17
CMTM3-215ENST00000568477 J3QKU1 62 aa14□□□□□ -0.17
CMTM3-215ENST00000568477 TERTO14746 1132 aaKnown RBP14□□□□□ -0.17
CMTM3-215ENST00000568477 CPNE3O75131 537 aaKnown RBP14□□□□□ -0.17
CMTM3-215ENST00000568477 SCRG1O75711 98 aa14□□□□□ -0.17
CMTM3-215ENST00000568477 URI1O94763 535 aaPredicted RBP14□□□□□ -0.17
CMTM3-215ENST00000568477 NTRK1P04629 796 aa14□□□□□ -0.17
CMTM3-215ENST00000568477 UQCRHP07919 91 aa14□□□□□ -0.17
CMTM3-215ENST00000568477 ACADLP28330 430 aa14□□□□□ -0.17
CMTM3-215ENST00000568477 SHMT2P34897 504 aa14□□□□□ -0.17
CMTM3-215ENST00000568477 NPY2RP49146 381 aa14□□□□□ -0.17
CMTM3-215ENST00000568477 TTPAP49638 278 aa14□□□□□ -0.17
CMTM3-215ENST00000568477 CRADDP78560 199 aa14□□□□□ -0.17
CMTM3-215ENST00000568477 CDK16Q00536 496 aa14□□□□□ -0.17
CMTM3-215ENST00000568477 KCNAB2Q13303 367 aa14□□□□□ -0.17
CMTM3-215ENST00000568477 SEMA3AQ14563 771 aa14□□□□□ -0.17
CMTM3-215ENST00000568477 DEFB109BQ30KR1 87 aa14□□□□□ -0.17
CMTM3-215ENST00000568477 ATP1A1-AS1Q5TC04 95 aa14□□□□□ -0.17
CMTM3-215ENST00000568477 HOOK3Q86VS8 718 aa14□□□□□ -0.17
CMTM3-215ENST00000568477 TBC1D21Q8IYX1 336 aa14□□□□□ -0.17
CMTM3-215ENST00000568477 ADGRF3Q8IZF5 1079 aa14□□□□□ -0.17
CMTM3-215ENST00000568477 PRELID2Q8N945 189 aa14□□□□□ -0.17
CMTM3-215ENST00000568477 NAPGQ99747 312 aaPredicted RBP14□□□□□ -0.17
CMTM3-215ENST00000568477 NRTNQ99748 197 aa14□□□□□ -0.17
CMTM3-215ENST00000568477 PITPNM3Q9BZ71 974 aa14□□□□□ -0.17
CMTM3-215ENST00000568477 SYTL2Q9HCH5 934 aa14□□□□□ -0.17
CMTM3-215ENST00000568477 LATS2Q9NRM7 1088 aa14□□□□□ -0.17
CMTM3-215ENST00000568477 ACTR10Q9NZ32 417 aa14□□□□□ -0.17
CMTM3-215ENST00000568477 POLG2Q9UHN1 485 aa14□□□□□ -0.17
CMTM3-215ENST00000568477 TUBD1Q9UJT1 453 aa14□□□□□ -0.17
CMTM3-215ENST00000568477 ICKQ9UPZ9 632 aa14□□□□□ -0.17
CMTM3-215ENST00000568477 PIPSLA2A3N6 862 aa13.99□□□□□ -0.17
CMTM3-215ENST00000568477 BHMG1C9JSJ3 638 aaPredicted RBP13.99□□□□□ -0.17
CMTM3-215ENST00000568477 PRMT5O14744 637 aaPredicted RBP13.99□□□□□ -0.17
CMTM3-215ENST00000568477 CD3EAPO15446 510 aaKnown RBP13.99□□□□□ -0.17
CMTM3-215ENST00000568477 CTIFO43310 598 aaKnown RBP13.99□□□□□ -0.17
CMTM3-215ENST00000568477 SLC28A2O43868 658 aa13.99□□□□□ -0.17
CMTM3-215ENST00000568477 KDM1AO60341 852 aa13.99□□□□□ -0.17
CMTM3-215ENST00000568477 SLU7O95391 586 aaKnown RBP13.99□□□□□ -0.17
CMTM3-215ENST00000568477 ST6GAL1P15907 406 aa13.99□□□□□ -0.17
CMTM3-215ENST00000568477 TPSB2P20231 275 aa13.99□□□□□ -0.17
CMTM3-215ENST00000568477 CSE1LP55060 971 aaKnown RBP13.99□□□□□ -0.17
CMTM3-215ENST00000568477 TMED2Q15363 201 aa13.99□□□□□ -0.17
CMTM3-215ENST00000568477 TPSAB1Q15661 275 aa13.99□□□□□ -0.17
CMTM3-215ENST00000568477 DNAJC21Q5F1R6 531 aaKnown RBP13.99□□□□□ -0.17
CMTM3-215ENST00000568477 PRICKLE2Q7Z3G6 844 aa13.99□□□□□ -0.17
CMTM3-215ENST00000568477 LDB1Q86U70 411 aaPredicted RBP13.99□□□□□ -0.17
CMTM3-215ENST00000568477 MPP5Q8N3R9 675 aa13.99□□□□□ -0.17
CMTM3-215ENST00000568477 OR5K2Q8NHB8 316 aa13.99□□□□□ -0.17
CMTM3-215ENST00000568477 APOBEC4Q8WW27 367 aaKnown RBP13.99□□□□□ -0.17
CMTM3-215ENST00000568477 CARD6Q9BX69 1037 aa13.99□□□□□ -0.17
CMTM3-215ENST00000568477 SLC25A18Q9H1K4 315 aa13.99□□□□□ -0.17
CMTM3-215ENST00000568477 TREX1Q9NSU2 369 aa13.99□□□□□ -0.17
CMTM3-215ENST00000568477 MARCH4Q9P2E8 410 aaPredicted RBP13.99□□□□□ -0.17
CMTM3-215ENST00000568477 TDRKHQ9Y2W6 561 aaKnown RBP13.99□□□□□ -0.17
CMTM3-215ENST00000568477 PCDHGA6Q9Y5G7 932 aa13.99□□□□□ -0.17
CMTM3-215ENST00000568477 BOD1L1Q8NFC6 3051 aa13.99□□□□□ -0.17
CMTM3-215ENST00000568477 SPTBP11277 2137 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms