RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 HECTD2Q5U5R9 776 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 B3GNTL1Q67FW5 361 aaPredicted RBP5.27□□□□□ -1.57
CAPN3-217ENST00000567817 PDPK2PQ6A1A2 396 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 ANKRD54Q6NXT1 300 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 DCLRE1AQ6PJP8 1040 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 DENND5BQ6ZUT9 1274 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 ADGRG6Q86SQ4 1221 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 PRPF39Q86UA1 669 aaKnown RBP5.27□□□□□ -1.57
CAPN3-217ENST00000567817 TMEM135Q86UB9 458 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 KLHDC8BQ8IXV7 354 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 CCDC185Q8N715 623 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 RFWD2Q8NHY2 731 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 POF1BQ8WVV4 589 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 DNAJC9Q8WXX5 260 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 RAB24Q969Q5 203 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 FUBP1Q96AE4 644 aaKnown RBP5.27□□□□□ -1.57
CAPN3-217ENST00000567817 SMARCD1Q96GM5 515 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 BOD1Q96IK1 185 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 ZNF668Q96K58 619 aaPredicted RBP5.27□□□□□ -1.57
CAPN3-217ENST00000567817 MRGPRX4Q96LA9 322 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 UROC1Q96N76 676 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 KLF6Q99612 283 aaPredicted RBP5.27□□□□□ -1.57
CAPN3-217ENST00000567817 FTHL17Q9BXU8 183 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 CADM1Q9BY67 442 aaKnown RBP5.27□□□□□ -1.57
CAPN3-217ENST00000567817 NMUR2Q9GZQ4 415 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 FAM49AQ9H0Q0 323 aaPredicted RBP5.27□□□□□ -1.57
CAPN3-217ENST00000567817 GBA3Q9H227 469 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 TOR3AQ9H497 397 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 NXF3Q9H4D5 531 aaKnown RBP5.27□□□□□ -1.57
CAPN3-217ENST00000567817 C10orf88Q9H8K7 445 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 KCNK13Q9HB14 408 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 CASS4Q9NQ75 786 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 TMEM74BQ9NUR3 256 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 GPATCH2LQ9NWQ4 482 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 COPG2Q9UBF2 871 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 WNT16Q9UBV4 365 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 VANGL2Q9ULK5 521 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 CORO1CQ9ULV4 474 aaPredicted RBP5.27□□□□□ -1.57
CAPN3-217ENST00000567817 DUSP12Q9UNI6 340 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 L3MBTL1Q9Y468 752 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 RPS6KL1Q9Y6S9 549 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 SETXQ7Z333 2677 aaKnown RBP5.27□□□□□ -1.57
CAPN3-217ENST00000567817 WDR81Q562E7 1941 aa5.27□□□□□ -1.57
CAPN3-217ENST00000567817 FANCMQ8IYD8 2048 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 ZFYVE26Q68DK2 2539 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 CYB561D2O14569 222 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 TPP1O14773 563 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 SLC30A4O14863 429 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 NVLO15381 856 aaKnown RBP5.26□□□□□ -1.57
CAPN3-217ENST00000567817 MFSD11O43934 449 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 CACNG3O60359 315 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 PLIN3O60664 434 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 ANXA9O76027 345 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 PRSS23O95084 383 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 PSMG1O95456 288 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 PROS1P07225 676 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 HKR1P10072 659 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 EGR2P11161 476 aaPredicted RBP5.26□□□□□ -1.57
CAPN3-217ENST00000567817 CPA3P15088 417 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 GOT1P17174 413 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 CALRP27797 417 aaKnown RBP5.26□□□□□ -1.57
CAPN3-217ENST00000567817 RECQLP46063 649 aaPredicted RBP5.26□□□□□ -1.57
CAPN3-217ENST00000567817 PTDSS1P48651 473 aaKnown RBP5.26□□□□□ -1.57
CAPN3-217ENST00000567817 SLC1A6P48664 564 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 HARS2P49590 506 aaKnown RBP5.26□□□□□ -1.57
CAPN3-217ENST00000567817 TKTL1P51854 596 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 COPAP53621 1224 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 DAOAP59103 153 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 ACTR3P61158 418 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 ABCE1P61221 599 aaKnown RBP5.26□□□□□ -1.57
CAPN3-217ENST00000567817 CXADRP78310 365 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 IRX1P78414 480 aaPredicted RBP5.26□□□□□ -1.57
CAPN3-217ENST00000567817 HSD11B2P80365 405 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 TLE1Q04724 770 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 GALNT2Q10471 571 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 CDH17Q12864 832 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 SF3A3Q12874 501 aaKnown RBP eCLIP5.26□□□□□ -1.57
CAPN3-217ENST00000567817 OVGP1Q12889 678 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 SLC10A2Q12908 348 aaPredicted RBP5.26□□□□□ -1.57
CAPN3-217ENST00000567817 SEMA3BQ13214 749 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 TDGQ13569 410 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 IL10RAQ13651 578 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 LAMB3Q13751 1172 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 BLMHQ13867 455 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 KCNC3Q14003 757 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 ODF1Q14990 250 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 UAP1L1Q3KQV9 507 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 GLRA4Q5JXX5 417 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 BRMS1LQ5PSV4 323 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 N4BP2L1Q5TBK1 243 aaPredicted RBP5.26□□□□□ -1.57
CAPN3-217ENST00000567817 TWF2Q6IBS0 349 aaKnown RBP5.26□□□□□ -1.57
CAPN3-217ENST00000567817 IRGCQ6NXR0 463 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 CDHR3Q6ZTQ4 885 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 CLEC20AQ6ZU45 233 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 KIAA0408Q6ZU52 694 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 PID1Q7Z2X4 250 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 ADGRD2Q7Z7M1 963 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 METTL23Q86XA0 190 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 FAM131BQ86XD5 332 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 MIER2Q8N344 545 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms