RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 GALNT6Q8NCL4 622 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 PPHLN1Q8NEY8 458 aaKnown RBP4.65□□□□□ -1.67
CLK3-219ENST00000567805 OR4E2Q8NGC2 313 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 OR52E1Q8NGJ3 308 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 OR6P1Q8NGX9 317 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 OR4L1Q8NH43 312 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 OR8K5Q8NH50 307 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 LCN9Q8WX39 176 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 ELMO1Q92556 727 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 TFGQ92734 400 aaPredicted RBP4.65□□□□□ -1.67
CLK3-219ENST00000567805 HDAC10Q969S8 669 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 ELMO2Q96JJ3 720 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 ZNF778Q96MU6 729 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 TUBB2BQ9BVA1 445 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 TSSK1BQ9BXA7 367 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 TLR10Q9BXR5 811 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 IL22Q9GZX6 179 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 SLC25A18Q9H1K4 315 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 SRMSQ9H3Y6 488 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 FANCEQ9HB96 536 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 SYTL2Q9HCH5 934 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 LHX9Q9NQ69 397 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 EIF2B3Q9NR50 452 aaKnown RBP4.65□□□□□ -1.67
CLK3-219ENST00000567805 LATS2Q9NRM7 1088 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 C1GALT1Q9NS00 363 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 FGF21Q9NSA1 209 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 HOMER3Q9NSC5 361 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 GEMIN8Q9NWZ8 242 aaKnown RBP4.65□□□□□ -1.67
CLK3-219ENST00000567805 SLC2A6Q9UGQ3 507 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 IL17BQ9UHF5 180 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 POLG2Q9UHN1 485 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 LNPEPQ9UIQ6 1025 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 ANAPC5Q9UJX4 755 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 KCND3Q9UK17 655 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 CROTQ9UKG9 612 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 POMT2Q9UKY4 750 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 PADI1Q9ULC6 663 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 DRG1Q9Y295 367 aaKnown RBP4.65□□□□□ -1.67
CLK3-219ENST00000567805 BTRCQ9Y297 605 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 TCAF1Q9Y4C2 921 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 PCDHB3Q9Y5E6 796 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 PCDHGA6Q9Y5G7 932 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 PCM1Q15154 2024 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 FASNP49327 2511 aaKnown RBP4.65□□□□□ -1.67
CLK3-219ENST00000567805 NUP210LQ5VU65 1888 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 COL12A1Q99715 3063 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 RELNP78509 3460 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 CCDC88CQ9P219 2028 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 SLC5A10A0PJK1 596 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 SLC9B1P1A6NJY1 282 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 C2orf74A8MZ97 194 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 BTN3A3O00478 584 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 BTN3A1O00481 513 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 TERTO14746 1132 aaKnown RBP4.64□□□□□ -1.67
CLK3-219ENST00000567805 CD3EAPO15446 510 aaKnown RBP4.64□□□□□ -1.67
CLK3-219ENST00000567805 NKX2-8O15522 239 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 SLC28A2O43868 658 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 CEP104O60308 925 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 KDM1AO60341 852 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 OR1I1O60431 355 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 SCRG1O75711 98 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 TIAF1O95411 115 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 RECKO95980 971 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 NTRK1P04629 796 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 RPN2P04844 631 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 ZSCAN5DPP0CG00 497 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 ITGB6P18564 788 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 TPSB2P20231 275 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 CDH3P22223 829 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 ACADLP28330 430 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 OAS2P29728 719 aaKnown RBP4.64□□□□□ -1.67
CLK3-219ENST00000567805 PRDX3P30048 256 aaKnown RBP4.64□□□□□ -1.67
CLK3-219ENST00000567805 CXCR5P32302 372 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 SHMT2P34897 504 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 KCNJ1P48048 391 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 ARCN1P48444 511 aaKnown RBP4.64□□□□□ -1.67
CLK3-219ENST00000567805 NPY2RP49146 381 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 TTPAP49638 278 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 BASP1P80723 227 aaKnown RBP4.64□□□□□ -1.67
CLK3-219ENST00000567805 PRKG2Q13237 762 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 KCNAB2Q13303 367 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 DNASE1L3Q13609 305 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 BRD3Q15059 726 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 TPSAB1Q15661 275 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 GPR19Q15760 415 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 PCID2Q5JVF3 399 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 ARMC3Q5W041 872 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 LRRC8BQ6P9F7 803 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 SPESP1Q6UW49 350 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 ZNF517Q6ZMY9 492 aaPredicted RBP4.64□□□□□ -1.67
CLK3-219ENST00000567805 MICALCLQ6ZW33 695 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 ZNF534Q76KX8 674 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 PRICKLE2Q7Z3G6 844 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 PRUNE1Q86TP1 453 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 HOOK3Q86VS8 718 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 TMEM126BQ8IUX1 230 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 ADGRF3Q8IZF5 1079 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 PHC3Q8NDX5 983 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 OR5AR1Q8NGP9 310 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 OR5K2Q8NHB8 316 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms