RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 CARD6Q9BX69 1037 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 TSSK1BQ9BXA7 367 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 IL22Q9GZX6 179 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 C1GALT1Q9NS00 363 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 KCND1Q9NSA2 647 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 SOHLH2Q9NX45 425 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 IL17BQ9UHF5 180 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 POLG2Q9UHN1 485 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 LNPEPQ9UIQ6 1025 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 ANAPC5Q9UJX4 755 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 KCND3Q9UK17 655 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 POMT2Q9UKY4 750 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 JRKLQ9Y4A0 524 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 TCAF1Q9Y4C2 921 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 PCDHB3Q9Y5E6 796 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 DOCK10Q96BY6 2186 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 TNRC6AQ8NDV7 1962 aaKnown RBP6.71□□□□□ -1.33
SF3B3-209ENST00000567635 SLC5A10A0PJK1 596 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 PIPSLA2A3N6 862 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 GSAPA4D1B5 854 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 C2orf74A8MZ97 194 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 BTN3A3O00478 584 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 BTN3A1O00481 513 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 KATNA1O75449 491 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 TIAF1O95411 115 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 RECKO95980 971 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 NTRK1P04629 796 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 PRKAR1AP10644 381 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 PLA2G2AP14555 144 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 ITGB6P18564 788 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 TCN2P20062 427 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 CCR10P46092 362 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 TTPAP49638 278 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 CRADDP78560 199 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 SARNPP82979 210 aaKnown RBP6.71□□□□□ -1.34
SF3B3-209ENST00000567635 TRIP13Q15645 432 aaPredicted RBP6.71□□□□□ -1.34
SF3B3-209ENST00000567635 GPR19Q15760 415 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 SYTL3Q4VX76 610 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 CRTC2Q53ET0 693 aaPredicted RBP6.71□□□□□ -1.34
SF3B3-209ENST00000567635 C16orf46Q6P387 395 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 LRRC8BQ6P9F7 803 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 FBXO38Q6PIJ6 1188 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 NAPRTQ6XQN6 538 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 ZNF534Q76KX8 674 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 HOOK3Q86VS8 718 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 TBC1D21Q8IYX1 336 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 ADGRF3Q8IZF5 1079 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 PRELID2Q8N945 189 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 OR52E1Q8NGJ3 308 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 OR5AR1Q8NGP9 310 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 ASZ1Q8WWH4 475 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 MAGOHBQ96A72 148 aaKnown RBP6.71□□□□□ -1.34
SF3B3-209ENST00000567635 ZNF501Q96CX3 271 aaPredicted RBP6.71□□□□□ -1.34
SF3B3-209ENST00000567635 PPM1MQ96MI6 270 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 NAP1L3Q99457 506 aaPredicted RBP6.71□□□□□ -1.34
SF3B3-209ENST00000567635 NRTNQ99748 197 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 HGH1Q9BTY7 390 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 FAM117AQ9C073 453 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 ADNPQ9H2P0 1102 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 XKR8Q9H6D3 395 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 SYTL2Q9HCH5 934 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 TREX1Q9NSU2 369 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 STARD5Q9NSY2 213 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 CATSPERZQ9NTU4 200 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 GEMIN8Q9NWZ8 242 aaKnown RBP6.71□□□□□ -1.34
SF3B3-209ENST00000567635 SERTAD3Q9UJW9 196 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 CROTQ9UKG9 612 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 ASF1AQ9Y294 204 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 BTRCQ9Y297 605 aa6.71□□□□□ -1.34
SF3B3-209ENST00000567635 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.71□□□□□ -1.34
SF3B3-209ENST00000567635 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-209ENST00000567635 MAGEB16A2A368 324 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 C21orf140B9A014 251 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 PRMT5O14744 637 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-209ENST00000567635 TERTO14746 1132 aaKnown RBP6.7□□□□□ -1.34
SF3B3-209ENST00000567635 KPNA5O15131 536 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 ZSCAN12O43309 604 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 ZNF500O60304 480 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-209ENST00000567635 KDM1AO60341 852 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 NDUFS3O75489 264 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 CREG1O75629 220 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 SCRG1O75711 98 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 SLCO2B1O94956 709 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 VAPBO95292 243 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 KRT14P02533 472 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 APOA4P06727 396 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 KLK3P07288 261 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-209ENST00000567635 MSL3P1P0C860 447 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 TPBGLP0DKB5 382 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 ST6GAL1P15907 406 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 TPSB2P20231 275 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 F8A1P23610 371 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 MGAT1P26572 445 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 AOAHP28039 575 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 NMBRP28336 390 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 CCR7P32248 378 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 SHMT2P34897 504 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 CSE1LP55060 971 aaKnown RBP6.7□□□□□ -1.34
SF3B3-209ENST00000567635 POLE2P56282 527 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 RPS15P62841 145 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms