RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 SKA1Q96BD8 255 aa17.27■□□□□ 0.35
HERC2-208ENST00000566635 PDXPQ96GD0 296 aa17.27■□□□□ 0.35
HERC2-208ENST00000566635 HIST1H2AHQ96KK5 128 aa17.27■□□□□ 0.35
HERC2-208ENST00000566635 ASB2Q96Q27 587 aa17.27■□□□□ 0.35
HERC2-208ENST00000566635 HIST1H2AJQ99878 128 aa17.27■□□□□ 0.35
HERC2-208ENST00000566635 H2AFJQ9BTM1 129 aa17.27■□□□□ 0.35
HERC2-208ENST00000566635 TRIM54Q9BYV2 358 aa17.27■□□□□ 0.35
HERC2-208ENST00000566635 DPEP2Q9H4A9 486 aa17.27■□□□□ 0.35
HERC2-208ENST00000566635 PSMD13Q9UNM6 376 aa17.27■□□□□ 0.35
HERC2-208ENST00000566635 SIT1Q9Y3P8 196 aa17.27■□□□□ 0.35
HERC2-208ENST00000566635 TNPO3Q9Y5L0 923 aaKnown RBP17.27■□□□□ 0.35
HERC2-208ENST00000566635 PABPN1LA6NDY0 278 aaKnown RBP17.26■□□□□ 0.35
HERC2-208ENST00000566635 PDGFBP01127 241 aaPredicted RBP17.26■□□□□ 0.35
HERC2-208ENST00000566635 CATP04040 527 aaKnown RBP17.26■□□□□ 0.35
HERC2-208ENST00000566635 GNPDA1P46926 289 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 CCR5P51681 352 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 PFN3P60673 137 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 GTF2H2Q13888 395 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 GTF2H2CQ6P1K8 395 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 EPGNQ6UW88 154 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 SYVN1Q86TM6 617 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 SPATS2Q86XZ4 545 aaKnown RBP17.26■□□□□ 0.35
HERC2-208ENST00000566635 TEX9Q8N6V9 391 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 OR52B6Q8NGF0 335 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 MCOLN3Q8TDD5 553 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 CCT6BQ92526 530 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 FOPNLQ96NB1 174 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 CD244Q9BZW8 370 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 MYLK2Q9H1R3 596 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 KLC4Q9NSK0 619 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 ZNF225Q9UK10 706 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 KCNK6Q9Y257 313 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 GOLGA8QA0A0J9YX86 632 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 GOLGA8OA6NCC3 632 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 GOLGA8NF8WBI6 632 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 MAP4P27816 1152 aaKnown RBP17.26■□□□□ 0.35
HERC2-208ENST00000566635 RPS9P46781 194 aaKnown RBP17.26■□□□□ 0.35
HERC2-208ENST00000566635 SPRED3Q2MJR0 410 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 PYCR3Q53H96 274 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 ENPP7Q6UWV6 458 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 OR1E3Q8WZA6 343 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 SNX19Q92543 992 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 ERP27Q96DN0 273 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 RILPQ96NA2 401 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 CDK15Q96Q40 435 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 ZDHHC5Q9C0B5 715 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 RASSF4Q9H2L5 321 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 WDR55Q9H6Y2 383 aaPredicted RBP17.26■□□□□ 0.35
HERC2-208ENST00000566635 NOL11Q9H8H0 719 aaKnown RBP17.26■□□□□ 0.35
HERC2-208ENST00000566635 PNMA8BQ9ULN7 279 aaPredicted RBP17.26■□□□□ 0.35
HERC2-208ENST00000566635 GPSM3Q9Y4H4 160 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 TRAF6Q9Y4K3 522 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 DNMT3AQ9Y6K1 912 aaPredicted RBP17.26■□□□□ 0.35
HERC2-208ENST00000566635 SLCO1B1Q9Y6L6 691 aa17.26■□□□□ 0.35
HERC2-208ENST00000566635 PRSS38A1L453 326 aa17.25■□□□□ 0.35
HERC2-208ENST00000566635 DCTN3O75935 186 aa17.25■□□□□ 0.35
HERC2-208ENST00000566635 C1orf105O95561 183 aa17.25■□□□□ 0.35
HERC2-208ENST00000566635 HOXC4P09017 264 aaPredicted RBP17.25■□□□□ 0.35
HERC2-208ENST00000566635 RPL10P27635 214 aaKnown RBP17.25■□□□□ 0.35
HERC2-208ENST00000566635 ACADLP28330 430 aa17.25■□□□□ 0.35
HERC2-208ENST00000566635 HK2P52789 917 aa17.25■□□□□ 0.35
HERC2-208ENST00000566635 AP1S2P56377 157 aa17.25■□□□□ 0.35
HERC2-208ENST00000566635 ZXDAP98168 799 aa17.25■□□□□ 0.35
HERC2-208ENST00000566635 PLOD1Q02809 727 aaPredicted RBP17.25■□□□□ 0.35
HERC2-208ENST00000566635 PDZD3Q86UT5 571 aa17.25■□□□□ 0.35
HERC2-208ENST00000566635 DEFB119Q8N690 84 aa17.25■□□□□ 0.35
HERC2-208ENST00000566635 OR56A4Q8NGH8 313 aa17.25■□□□□ 0.35
HERC2-208ENST00000566635 OR52B2Q96RD2 323 aa17.25■□□□□ 0.35
HERC2-208ENST00000566635 OSGEPL1Q9H4B0 414 aa17.25■□□□□ 0.35
HERC2-208ENST00000566635 RMI1Q9H9A7 625 aa17.25■□□□□ 0.35
HERC2-208ENST00000566635 CARS2Q9HA77 564 aaKnown RBP17.25■□□□□ 0.35
HERC2-208ENST00000566635 OPTCQ9UBM4 332 aa17.25■□□□□ 0.35
HERC2-208ENST00000566635 VTI1BQ9UEU0 232 aa17.25■□□□□ 0.35
HERC2-208ENST00000566635 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.25■□□□□ 0.35
HERC2-208ENST00000566635 LRP4O75096 1905 aa17.25■□□□□ 0.35
HERC2-208ENST00000566635 SLCO1B7G3V0H7 640 aa17.24■□□□□ 0.35
HERC2-208ENST00000566635 OR7A17O14581 309 aa17.24■□□□□ 0.35
HERC2-208ENST00000566635 BTKQ06187 659 aa17.24■□□□□ 0.35
HERC2-208ENST00000566635 RPA4Q13156 261 aa17.24■□□□□ 0.35
HERC2-208ENST00000566635 TCEA2Q15560 299 aa17.24■□□□□ 0.35
HERC2-208ENST00000566635 CDKL4Q5MAI5 379 aa17.24■□□□□ 0.35
HERC2-208ENST00000566635 KANK2Q63ZY3 851 aa17.24■□□□□ 0.35
HERC2-208ENST00000566635 METRNLQ641Q3 311 aa17.24■□□□□ 0.35
HERC2-208ENST00000566635 PYCR2Q96C36 320 aa17.24■□□□□ 0.35
HERC2-208ENST00000566635 SCARF2Q96GP6 870 aaPredicted RBP17.24■□□□□ 0.35
HERC2-208ENST00000566635 WDR92Q96MX6 357 aa17.24■□□□□ 0.35
HERC2-208ENST00000566635 LRRC37BQ96QE4 947 aa17.24■□□□□ 0.35
HERC2-208ENST00000566635 UHRF1Q96T88 793 aaPredicted RBP17.24■□□□□ 0.35
HERC2-208ENST00000566635 PKP4Q99569 1192 aa17.24■□□□□ 0.35
HERC2-208ENST00000566635 TIMM29Q9BSF4 260 aa17.24■□□□□ 0.35
HERC2-208ENST00000566635 NMUR2Q9GZQ4 415 aa17.24■□□□□ 0.35
HERC2-208ENST00000566635 ATG10Q9H0Y0 220 aa17.24■□□□□ 0.35
HERC2-208ENST00000566635 STN1Q9H668 368 aaKnown RBP17.24■□□□□ 0.35
HERC2-208ENST00000566635 CAAP1Q9H8G2 361 aa17.24■□□□□ 0.35
HERC2-208ENST00000566635 ST14Q9Y5Y6 855 aa17.24■□□□□ 0.35
HERC2-208ENST00000566635 CFAP20Q9Y6A4 193 aaKnown RBP17.24■□□□□ 0.35
HERC2-208ENST00000566635 USP34Q70CQ2 3546 aa17.24■□□□□ 0.35
HERC2-208ENST00000566635 PRAMEF26H0Y7S4 382 aa17.24■□□□□ 0.35
HERC2-208ENST00000566635 K7EPI3 171 aa17.24■□□□□ 0.35
HERC2-208ENST00000566635 AZIN1O14977 448 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms