RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 OR51F1A6NGY5 319 aa19.56■□□□□ 0.72
CLN6-207ENST00000566347 ADRA1DP25100 572 aa19.56■□□□□ 0.72
CLN6-207ENST00000566347 SHMT2P34897 504 aa19.56■□□□□ 0.72
CLN6-207ENST00000566347 GPS2Q13227 327 aa19.56■□□□□ 0.72
CLN6-207ENST00000566347 PRKG2Q13237 762 aa19.56■□□□□ 0.72
CLN6-207ENST00000566347 SEMA5AQ13591 1074 aa19.56■□□□□ 0.72
CLN6-207ENST00000566347 RPS6KA1Q15418 735 aa19.56■□□□□ 0.72
CLN6-207ENST00000566347 UGT8Q16880 541 aa19.56■□□□□ 0.72
CLN6-207ENST00000566347 SYTL3Q4VX76 610 aa19.56■□□□□ 0.72
CLN6-207ENST00000566347 TSTD2Q5T7W7 516 aa19.56■□□□□ 0.72
CLN6-207ENST00000566347 ZNF517Q6ZMY9 492 aaPredicted RBP19.56■□□□□ 0.72
CLN6-207ENST00000566347 ADGRF3Q8IZF5 1079 aa19.56■□□□□ 0.72
CLN6-207ENST00000566347 CCDC89Q8N998 374 aa19.56■□□□□ 0.72
CLN6-207ENST00000566347 C1orf54Q8WWF1 131 aa19.56■□□□□ 0.72
CLN6-207ENST00000566347 THAP4Q8WY91 577 aa19.56■□□□□ 0.72
CLN6-207ENST00000566347 HDAC10Q969S8 669 aa19.56■□□□□ 0.72
CLN6-207ENST00000566347 AKIRIN1Q9H9L7 192 aaPredicted RBP19.56■□□□□ 0.72
CLN6-207ENST00000566347 RAB6BQ9NRW1 208 aa19.56■□□□□ 0.72
CLN6-207ENST00000566347 PAK5Q9P286 719 aa19.56■□□□□ 0.72
CLN6-207ENST00000566347 POLG2Q9UHN1 485 aa19.56■□□□□ 0.72
CLN6-207ENST00000566347 ASF1AQ9Y294 204 aa19.56■□□□□ 0.72
CLN6-207ENST00000566347 TMEM150CB9EJG8 249 aa19.55■□□□□ 0.72
CLN6-207ENST00000566347 ST6GAL1P15907 406 aa19.55■□□□□ 0.72
CLN6-207ENST00000566347 PPARGP37231 505 aaPredicted RBP19.55■□□□□ 0.72
CLN6-207ENST00000566347 ACVR1Q04771 509 aa19.55■□□□□ 0.72
CLN6-207ENST00000566347 IZUMO3Q5VZ72 239 aa19.55■□□□□ 0.72
CLN6-207ENST00000566347 TCTN3Q6NUS6 607 aa19.55■□□□□ 0.72
CLN6-207ENST00000566347 TMEM135Q86UB9 458 aa19.55■□□□□ 0.72
CLN6-207ENST00000566347 HOOK3Q86VS8 718 aa19.55■□□□□ 0.72
CLN6-207ENST00000566347 APLFQ8IW19 511 aaPredicted RBP19.55■□□□□ 0.72
CLN6-207ENST00000566347 TBC1D21Q8IYX1 336 aa19.55■□□□□ 0.72
CLN6-207ENST00000566347 PEX13Q92968 403 aa19.55■□□□□ 0.72
CLN6-207ENST00000566347 TRAPPC9Q96Q05 1148 aa19.55■□□□□ 0.72
CLN6-207ENST00000566347 EPN3Q9H201 632 aa19.55■□□□□ 0.72
CLN6-207ENST00000566347 XKR8Q9H6D3 395 aa19.55■□□□□ 0.72
CLN6-207ENST00000566347 CASS4Q9NQ75 786 aa19.55■□□□□ 0.72
CLN6-207ENST00000566347 ACTR10Q9NZ32 417 aa19.55■□□□□ 0.72
CLN6-207ENST00000566347 SERTAD3Q9UJW9 196 aa19.55■□□□□ 0.72
CLN6-207ENST00000566347 ICKQ9UPZ9 632 aa19.55■□□□□ 0.72
CLN6-207ENST00000566347 FARSAQ9Y285 508 aaKnown RBP19.55■□□□□ 0.72
CLN6-207ENST00000566347 SPTBP11277 2137 aa19.55■□□□□ 0.72
CLN6-207ENST00000566347 SLC5A10A0PJK1 596 aa19.54■□□□□ 0.72
CLN6-207ENST00000566347 MEN1O00255 615 aa19.54■□□□□ 0.72
CLN6-207ENST00000566347 ARHGAP6O43182 974 aa19.54■□□□□ 0.72
CLN6-207ENST00000566347 KDM1AO60341 852 aa19.54■□□□□ 0.72
CLN6-207ENST00000566347 GOT2P00505 430 aaKnown RBP19.54■□□□□ 0.72
CLN6-207ENST00000566347 APRTP07741 180 aa19.54■□□□□ 0.72
CLN6-207ENST00000566347 CYP2A7P20853 494 aa19.54■□□□□ 0.72
CLN6-207ENST00000566347 ACADLP28330 430 aa19.54■□□□□ 0.72
CLN6-207ENST00000566347 ABRQ12979 859 aa19.54■□□□□ 0.72
CLN6-207ENST00000566347 SNX1Q13596 522 aa19.54■□□□□ 0.72
CLN6-207ENST00000566347 MEI1Q5TIA1 1274 aa19.54■□□□□ 0.72
CLN6-207ENST00000566347 SPESP1Q6UW49 350 aa19.54■□□□□ 0.72
CLN6-207ENST00000566347 DSELQ8IZU8 1212 aa19.54■□□□□ 0.72
CLN6-207ENST00000566347 SLC38A9Q8NBW4 561 aa19.54■□□□□ 0.72
CLN6-207ENST00000566347 OR5AR1Q8NGP9 310 aa19.54■□□□□ 0.72
CLN6-207ENST00000566347 OR6P1Q8NGX9 317 aa19.54■□□□□ 0.72
CLN6-207ENST00000566347 OR4L1Q8NH43 312 aa19.54■□□□□ 0.72
CLN6-207ENST00000566347 OR1L3Q8NH93 324 aa19.54■□□□□ 0.72
CLN6-207ENST00000566347 OR5K2Q8NHB8 316 aa19.54■□□□□ 0.72
CLN6-207ENST00000566347 CLIP3Q96DZ5 547 aa19.54■□□□□ 0.72
CLN6-207ENST00000566347 SGSM3Q96HU1 749 aa19.54■□□□□ 0.72
CLN6-207ENST00000566347 RUFY1Q96T51 708 aa19.54■□□□□ 0.72
CLN6-207ENST00000566347 TSSK1BQ9BXA7 367 aa19.54■□□□□ 0.72
CLN6-207ENST00000566347 CHST8Q9H2A9 424 aa19.54■□□□□ 0.72
CLN6-207ENST00000566347 ACTR5Q9H9F9 607 aaPredicted RBP19.54■□□□□ 0.72
CLN6-207ENST00000566347 OR6C2Q9NZP2 312 aa19.54■□□□□ 0.72
CLN6-207ENST00000566347 TP53TG5Q9Y2B4 290 aa19.54■□□□□ 0.72
CLN6-207ENST00000566347 TCAF1Q9Y4C2 921 aa19.54■□□□□ 0.72
CLN6-207ENST00000566347 RAB40ALP0C0E4 278 aa19.53■□□□□ 0.72
CLN6-207ENST00000566347 GRIA1P42261 906 aa19.53■□□□□ 0.72
CLN6-207ENST00000566347 ITGA1P56199 1179 aa19.53■□□□□ 0.72
CLN6-207ENST00000566347 RPS18P62269 152 aaKnown RBP19.53■□□□□ 0.72
CLN6-207ENST00000566347 PRAMEP78395 509 aa19.53■□□□□ 0.72
CLN6-207ENST00000566347 KLRB1Q12918 225 aa19.53■□□□□ 0.72
CLN6-207ENST00000566347 BRD3Q15059 726 aa19.53■□□□□ 0.72
CLN6-207ENST00000566347 CCNG2Q16589 344 aa19.53■□□□□ 0.72
CLN6-207ENST00000566347 FASTKD1Q53R41 847 aaKnown RBP19.53■□□□□ 0.72
CLN6-207ENST00000566347 ZNF789Q5FWF6 425 aa19.53■□□□□ 0.72
CLN6-207ENST00000566347 AARS2Q5JTZ9 985 aaKnown RBP19.53■□□□□ 0.72
CLN6-207ENST00000566347 PLEKHS1Q5SXH7 462 aa19.53■□□□□ 0.72
CLN6-207ENST00000566347 C4orf22Q6V702 233 aa19.53■□□□□ 0.72
CLN6-207ENST00000566347 PPHLN1Q8NEY8 458 aaKnown RBP19.53■□□□□ 0.72
CLN6-207ENST00000566347 NRTNQ99748 197 aa19.53■□□□□ 0.72
CLN6-207ENST00000566347 SLC2A6Q9UGQ3 507 aa19.53■□□□□ 0.72
CLN6-207ENST00000566347 E7EQ34 232 aa19.52■□□□□ 0.72
CLN6-207ENST00000566347 OR1I1O60431 355 aa19.52■□□□□ 0.72
CLN6-207ENST00000566347 HBQ1P09105 142 aa19.52■□□□□ 0.72
CLN6-207ENST00000566347 ETS1P14921 441 aa19.52■□□□□ 0.72
CLN6-207ENST00000566347 RORAP35398 523 aa19.52■□□□□ 0.72
CLN6-207ENST00000566347 PRAMEF17Q5VTA0 474 aa19.52■□□□□ 0.72
CLN6-207ENST00000566347 DRICH1Q6PGQ1 229 aaPredicted RBP19.52■□□□□ 0.72
CLN6-207ENST00000566347 UNC5AQ6ZN44 842 aa19.52■□□□□ 0.72
CLN6-207ENST00000566347 C19orf47Q8N9M1 422 aaKnown RBP19.52■□□□□ 0.72
CLN6-207ENST00000566347 TCTN2Q96GX1 697 aa19.52■□□□□ 0.72
CLN6-207ENST00000566347 DPH2Q9BQC3 489 aaPredicted RBP19.52■□□□□ 0.72
CLN6-207ENST00000566347 NLNQ9BYT8 704 aa19.52■□□□□ 0.72
CLN6-207ENST00000566347 SLC7A5P2Q9GIP4 190 aa19.52■□□□□ 0.72
CLN6-207ENST00000566347 CHRNA10Q9GZZ6 450 aa19.52■□□□□ 0.72
CLN6-207ENST00000566347 EIF2B3Q9NR50 452 aaKnown RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms