RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 CLMPQ9H6B4 373 aa21.19■□□□□ 0.98
SPSB3-208ENST00000566339 CARS2Q9HA77 564 aaKnown RBP21.19■□□□□ 0.98
SPSB3-208ENST00000566339 UBA2Q9UBT2 640 aaPredicted RBP21.19■□□□□ 0.98
SPSB3-208ENST00000566339 PCDHB5Q9Y5E4 795 aa21.19■□□□□ 0.98
SPSB3-208ENST00000566339 ISPDA4D126 451 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 E5RI56 91 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 M0R3G1 203 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 BCKDKO14874 412 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 PCNAP12004 261 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 TACR2P21452 398 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 PIGAP37287 484 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 TRAF3Q13114 568 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 PON2Q15165 354 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 PAN2Q504Q3 1202 aaKnown RBP21.18■□□□□ 0.98
SPSB3-208ENST00000566339 CAPN13Q6MZZ7 669 aaPredicted RBP21.18■□□□□ 0.98
SPSB3-208ENST00000566339 TUBA3EQ6PEY2 450 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 SPESP1Q6UW49 350 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 MSANTD1Q6ZTZ1 278 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 MILR1Q7Z6M3 343 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 RBM23Q86U06 439 aaKnown RBP21.18■□□□□ 0.98
SPSB3-208ENST00000566339 MDGA1Q8NFP4 955 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 OR6Q1Q8NGQ2 317 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 UBTD2Q8WUN7 234 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 RMDN1Q96DB5 314 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 ADGRE3Q9BY15 652 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 DPY30Q9C005 99 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 RMND5AQ9H871 391 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 PAK1IP1Q9NWT1 392 aaPredicted RBP21.18■□□□□ 0.98
SPSB3-208ENST00000566339 ABI2Q9NYB9 513 aaPredicted RBP21.18■□□□□ 0.98
SPSB3-208ENST00000566339 TRPS1Q9UHF7 1281 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 INTS6Q9UL03 887 aaKnown RBP21.18■□□□□ 0.98
SPSB3-208ENST00000566339 TRIM43BA6NCK2 446 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 F5H5T6 163 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 KDELR3O43731 214 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 HS6ST1O60243 411 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 NIPSNAP2O75323 286 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 JRKO75564 520 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 CREG1O75629 220 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 TGM1P22735 817 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 RPS3P23396 243 aaKnown RBP eCLIP21.18■□□□□ 0.98
SPSB3-208ENST00000566339 MC4RP32245 332 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 HTR6P50406 440 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 CLCN7P51798 805 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 CAP1Q01518 475 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 BCL2A1Q16548 175 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 NKG7Q16617 165 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 VARS2Q5ST30 1063 aaKnown RBP21.18■□□□□ 0.98
SPSB3-208ENST00000566339 LRRC8DQ7L1W4 858 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 PGBD3Q8N328 593 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 MFSD4AQ8N468 514 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 OR10A6Q8NH74 314 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 PYURFQ96I23 114 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.18■□□□□ 0.988e-12■■■■■ 36
SPSB3-208ENST00000566339 KCNH6Q9H252 994 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 KAT8Q9H7Z6 458 aaKnown RBP21.18■□□□□ 0.98
SPSB3-208ENST00000566339 TMEFF2Q9UIK5 374 aaPredicted RBP21.18■□□□□ 0.98
SPSB3-208ENST00000566339 INVSQ9Y283 1065 aa21.18■□□□□ 0.98
SPSB3-208ENST00000566339 FAM32AQ9Y421 112 aaKnown RBP21.18■□□□□ 0.98
SPSB3-208ENST00000566339 GPC6Q9Y625 555 aaPredicted RBP21.18■□□□□ 0.98
SPSB3-208ENST00000566339 A0A096LPI6 279 aa21.17■□□□□ 0.98
SPSB3-208ENST00000566339 WNT9AO14904 365 aa21.17■□□□□ 0.98
SPSB3-208ENST00000566339 ANGPTL1O95841 491 aa21.17■□□□□ 0.98
SPSB3-208ENST00000566339 CD40LGP29965 261 aa21.17■□□□□ 0.98
SPSB3-208ENST00000566339 GNPDA1P46926 289 aa21.17■□□□□ 0.98
SPSB3-208ENST00000566339 DGKQP52824 942 aa21.17■□□□□ 0.98
SPSB3-208ENST00000566339 MAPK10P53779 464 aa21.17■□□□□ 0.98
SPSB3-208ENST00000566339 EMX1Q04741 257 aaPredicted RBP21.17■□□□□ 0.98
SPSB3-208ENST00000566339 CDC20Q12834 499 aa21.17■□□□□ 0.98
SPSB3-208ENST00000566339 RFTN2Q52LD8 501 aaPredicted RBP21.17■□□□□ 0.98
SPSB3-208ENST00000566339 CCDC92Q53HC0 331 aaPredicted RBP21.17■□□□□ 0.98
SPSB3-208ENST00000566339 IPCEF1Q8WWN9 437 aaPredicted RBP21.17■□□□□ 0.98
SPSB3-208ENST00000566339 CDK5RAP1Q96SZ6 601 aaKnown RBP21.17■□□□□ 0.98
SPSB3-208ENST00000566339 DGCR6LQ9BY27 220 aa21.17■□□□□ 0.98
SPSB3-208ENST00000566339 SLC29A3Q9BZD2 475 aa21.17■□□□□ 0.98
SPSB3-208ENST00000566339 C1orf109Q9NX04 203 aa21.17■□□□□ 0.98
SPSB3-208ENST00000566339 OARD1Q9Y530 152 aa21.17■□□□□ 0.98
SPSB3-208ENST00000566339 MAGED1Q9Y5V3 778 aaPredicted RBP21.17■□□□□ 0.98
SPSB3-208ENST00000566339 CHD5Q8TDI0 1954 aa21.16■□□□□ 0.98
SPSB3-208ENST00000566339 SLC12A8A0AV02 714 aa21.16■□□□□ 0.98
SPSB3-208ENST00000566339 TMEM247A6NEH6 219 aa21.16■□□□□ 0.98
SPSB3-208ENST00000566339 AQP9O43315 295 aa21.16■□□□□ 0.98
SPSB3-208ENST00000566339 E2F6O75461 281 aa21.16■□□□□ 0.98
SPSB3-208ENST00000566339 PRLP01236 227 aa21.16■□□□□ 0.98
SPSB3-208ENST00000566339 PGRP06401 933 aa21.16■□□□□ 0.98
SPSB3-208ENST00000566339 PIRTP0C851 137 aa21.16■□□□□ 0.98
SPSB3-208ENST00000566339 PRSS56P0CW18 603 aa21.16■□□□□ 0.98
SPSB3-208ENST00000566339 SLC2A4P14672 509 aa21.16■□□□□ 0.98
SPSB3-208ENST00000566339 ARHGDIAP52565 204 aa21.16■□□□□ 0.98
SPSB3-208ENST00000566339 CDH4P55283 916 aa21.16■□□□□ 0.98
SPSB3-208ENST00000566339 SLC35A2P78381 396 aa21.16■□□□□ 0.98
SPSB3-208ENST00000566339 ABHD18Q0P651 414 aa21.16■□□□□ 0.98
SPSB3-208ENST00000566339 HIST2H2ACQ16777 129 aaPredicted RBP21.16■□□□□ 0.98
SPSB3-208ENST00000566339 IL31Q6EBC2 164 aa21.16■□□□□ 0.98
SPSB3-208ENST00000566339 P2RY8Q86VZ1 359 aa21.16■□□□□ 0.98
SPSB3-208ENST00000566339 FAM86B1Q8N7N1 296 aa21.16■□□□□ 0.98
SPSB3-208ENST00000566339 FBXO32Q969P5 355 aa21.16■□□□□ 0.98
SPSB3-208ENST00000566339 ZNF300Q96RE9 604 aaPredicted RBP21.16■□□□□ 0.98
SPSB3-208ENST00000566339 APOL4Q9BPW4 351 aa21.16■□□□□ 0.98
SPSB3-208ENST00000566339 SCUBE2Q9NQ36 999 aa21.16■□□□□ 0.98
SPSB3-208ENST00000566339 SAMD4AQ9UPU9 718 aaKnown RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms