RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 NAPRTQ6XQN6 538 aa17.76■□□□□ 0.43
USB1-213ENST00000566292 PRUNE1Q86TP1 453 aa17.76■□□□□ 0.43
USB1-213ENST00000566292 AMIGO1Q86WK6 493 aa17.76■□□□□ 0.43
USB1-213ENST00000566292 APLFQ8IW19 511 aaPredicted RBP17.76■□□□□ 0.43
USB1-213ENST00000566292 DNAAF3Q8N9W5 541 aa17.76■□□□□ 0.43
USB1-213ENST00000566292 OR5AR1Q8NGP9 310 aa17.76■□□□□ 0.43
USB1-213ENST00000566292 LRFN5Q96NI6 719 aa17.76■□□□□ 0.43
USB1-213ENST00000566292 TRAPPC9Q96Q05 1148 aa17.76■□□□□ 0.43
USB1-213ENST00000566292 TRIM55Q9BYV6 548 aa17.76■□□□□ 0.43
USB1-213ENST00000566292 KLHL25Q9H0H3 589 aa17.76■□□□□ 0.43
USB1-213ENST00000566292 CHST8Q9H2A9 424 aa17.76■□□□□ 0.43
USB1-213ENST00000566292 FANCEQ9HB96 536 aa17.76■□□□□ 0.43
USB1-213ENST00000566292 ACTR10Q9NZ32 417 aa17.76■□□□□ 0.43
USB1-213ENST00000566292 ICKQ9UPZ9 632 aa17.76■□□□□ 0.43
USB1-213ENST00000566292 FARSAQ9Y285 508 aaKnown RBP17.76■□□□□ 0.43
USB1-213ENST00000566292 ERI2A8K979 691 aaKnown RBP17.75■□□□□ 0.43
USB1-213ENST00000566292 TMEM150CB9EJG8 249 aa17.75■□□□□ 0.43
USB1-213ENST00000566292 LIN7AO14910 233 aaPredicted RBP17.75■□□□□ 0.43
USB1-213ENST00000566292 DNAJB5O75953 348 aa17.75■□□□□ 0.43
USB1-213ENST00000566292 SUN1O94901 812 aa17.75■□□□□ 0.43
USB1-213ENST00000566292 MSL3P1P0C860 447 aa17.75■□□□□ 0.43
USB1-213ENST00000566292 ETS1P14921 441 aa17.75■□□□□ 0.43
USB1-213ENST00000566292 RORAP35398 523 aa17.75■□□□□ 0.43
USB1-213ENST00000566292 FDFT1P37268 417 aa17.75■□□□□ 0.43
USB1-213ENST00000566292 RPS15P62841 145 aaKnown RBP17.75■□□□□ 0.43
USB1-213ENST00000566292 SEMA5AQ13591 1074 aa17.75■□□□□ 0.43
USB1-213ENST00000566292 BRD3Q15059 726 aa17.75■□□□□ 0.43
USB1-213ENST00000566292 IZUMO3Q5VZ72 239 aa17.75■□□□□ 0.43
USB1-213ENST00000566292 TCTN3Q6NUS6 607 aa17.75■□□□□ 0.43
USB1-213ENST00000566292 SYVN1Q86TM6 617 aa17.75■□□□□ 0.43
USB1-213ENST00000566292 SLC13A5Q86YT5 568 aaPredicted RBP17.75■□□□□ 0.43
USB1-213ENST00000566292 DSELQ8IZU8 1212 aa17.75■□□□□ 0.43
USB1-213ENST00000566292 C1orf54Q8WWF1 131 aa17.75■□□□□ 0.43
USB1-213ENST00000566292 CPT1BQ92523 772 aa17.75■□□□□ 0.43
USB1-213ENST00000566292 ELMO1Q92556 727 aa17.75■□□□□ 0.43
USB1-213ENST00000566292 HDAC10Q969S8 669 aa17.75■□□□□ 0.43
USB1-213ENST00000566292 ZNF778Q96MU6 729 aa17.75■□□□□ 0.43
USB1-213ENST00000566292 FRMD8P1Q9BZ68 369 aaPredicted RBP17.75■□□□□ 0.43
USB1-213ENST00000566292 RELNP78509 3460 aa17.74■□□□□ 0.43
USB1-213ENST00000566292 SLC5A10A0PJK1 596 aa17.74■□□□□ 0.43
USB1-213ENST00000566292 HEATR9A2RTY3 570 aa17.74■□□□□ 0.43
USB1-213ENST00000566292 C2orf74A8MZ97 194 aa17.74■□□□□ 0.43
USB1-213ENST00000566292 BHMG1C9JSJ3 638 aaPredicted RBP17.74■□□□□ 0.43
USB1-213ENST00000566292 MEN1O00255 615 aa17.74■□□□□ 0.43
USB1-213ENST00000566292 QSOX1O00391 747 aa17.74■□□□□ 0.43
USB1-213ENST00000566292 ARHGAP6O43182 974 aa17.74■□□□□ 0.43
USB1-213ENST00000566292 OR1I1O60431 355 aa17.74■□□□□ 0.43
USB1-213ENST00000566292 GOT2P00505 430 aaKnown RBP17.74■□□□□ 0.43
USB1-213ENST00000566292 IFNB1P01574 187 aa17.74■□□□□ 0.43
USB1-213ENST00000566292 FTH1P02794 183 aa17.74■□□□□ 0.43
USB1-213ENST00000566292 PDGFAP04085 211 aa17.74■□□□□ 0.43
USB1-213ENST00000566292 TPBGLP0DKB5 382 aa17.74■□□□□ 0.43
USB1-213ENST00000566292 GSDMDP57764 484 aa17.74■□□□□ 0.43
USB1-213ENST00000566292 IGFBP7Q16270 282 aa17.74■□□□□ 0.43
USB1-213ENST00000566292 TSTD2Q5T7W7 516 aa17.74■□□□□ 0.43
USB1-213ENST00000566292 CPZQ66K79 652 aa17.74■□□□□ 0.43
USB1-213ENST00000566292 PPP1R21Q6ZMI0 780 aa17.74■□□□□ 0.43
USB1-213ENST00000566292 GLIS1Q8NBF1 620 aa17.74■□□□□ 0.43
USB1-213ENST00000566292 SEC14L1Q92503 715 aa17.74■□□□□ 0.43
USB1-213ENST00000566292 RANBP9Q96S59 729 aa17.74■□□□□ 0.43
USB1-213ENST00000566292 SYTL2Q9HCH5 934 aa17.74■□□□□ 0.43
USB1-213ENST00000566292 PCMTD2Q9NV79 361 aa17.74■□□□□ 0.43
USB1-213ENST00000566292 RIMKLBQ9ULI2 386 aa17.74■□□□□ 0.43
USB1-213ENST00000566292 GUCA1BQ9UMX6 200 aa17.74■□□□□ 0.43
USB1-213ENST00000566292 DOPEY2Q9Y3R5 2298 aa17.73■□□□□ 0.43
USB1-213ENST00000566292 KLK3P07288 261 aaPredicted RBP17.73■□□□□ 0.43
USB1-213ENST00000566292 CAPN1P07384 714 aa17.73■□□□□ 0.43
USB1-213ENST00000566292 FOXK1P85037 733 aa17.73■□□□□ 0.43
USB1-213ENST00000566292 ACVR1Q04771 509 aa17.73■□□□□ 0.43
USB1-213ENST00000566292 KLRB1Q12918 225 aa17.73■□□□□ 0.43
USB1-213ENST00000566292 SNX1Q13596 522 aa17.73■□□□□ 0.43
USB1-213ENST00000566292 FAM69BQ5VUD6 431 aa17.73■□□□□ 0.43
USB1-213ENST00000566292 AFTPHQ6ULP2 937 aa17.73■□□□□ 0.43
USB1-213ENST00000566292 SPESP1Q6UW49 350 aa17.73■□□□□ 0.43
USB1-213ENST00000566292 UNC5AQ6ZN44 842 aa17.73■□□□□ 0.43
USB1-213ENST00000566292 CDHR3Q6ZTQ4 885 aa17.73■□□□□ 0.43
USB1-213ENST00000566292 ZNF534Q76KX8 674 aa17.73■□□□□ 0.43
USB1-213ENST00000566292 TRIM73Q86UV7 250 aa17.73■□□□□ 0.43
USB1-213ENST00000566292 ENDOVQ8N8Q3 282 aaKnown RBP17.73■□□□□ 0.43
USB1-213ENST00000566292 THAP4Q8WY91 577 aa17.73■□□□□ 0.43
USB1-213ENST00000566292 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.73■□□□□ 0.43
USB1-213ENST00000566292 CLIP3Q96DZ5 547 aa17.73■□□□□ 0.43
USB1-213ENST00000566292 ACTR5Q9H9F9 607 aaPredicted RBP17.73■□□□□ 0.43
USB1-213ENST00000566292 CASS4Q9NQ75 786 aa17.73■□□□□ 0.43
USB1-213ENST00000566292 ZNF148Q9UQR1 794 aa17.73■□□□□ 0.43
USB1-213ENST00000566292 ASF1AQ9Y294 204 aa17.73■□□□□ 0.43
USB1-213ENST00000566292 PCSK5Q92824 1860 aa17.73■□□□□ 0.43
USB1-213ENST00000566292 GAS8O95995 478 aa17.72■□□□□ 0.43
USB1-213ENST00000566292 RAB40ALP0C0E4 278 aa17.72■□□□□ 0.43
USB1-213ENST00000566292 OR56A5P0C7T3 313 aa17.72■□□□□ 0.43
USB1-213ENST00000566292 UGT2B7P16662 529 aa17.72■□□□□ 0.43
USB1-213ENST00000566292 CYP2A7P20853 494 aa17.72■□□□□ 0.43
USB1-213ENST00000566292 ADRA1DP25100 572 aa17.72■□□□□ 0.43
USB1-213ENST00000566292 SHMT2P34897 504 aa17.72■□□□□ 0.43
USB1-213ENST00000566292 CHAF1BQ13112 559 aa17.72■□□□□ 0.43
USB1-213ENST00000566292 SEMA3AQ14563 771 aa17.72■□□□□ 0.43
USB1-213ENST00000566292 SIX1Q15475 284 aaPredicted RBP17.72■□□□□ 0.43
USB1-213ENST00000566292 ZIC1Q15915 447 aa17.72■□□□□ 0.43
USB1-213ENST00000566292 LYPLAL1Q5VWZ2 237 aa17.72■□□□□ 0.43
USB1-213ENST00000566292 FAM198BQ6UWH4 519 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms