RNA–Protein interactions for RNA: ENST00000565378.1

BBS2-210, Transcript of Bardet-Biedl syndrome 2, human

TSL 4

Gene BBS2, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS2-210	ENST00000565378	UPF2	Q9HAU5	1272 aa	Known RBP	4.88	□□□□□ -1.63
BBS2-210	ENST00000565378	ARHGEF38	Q9NXL2	777 aa		4.88	□□□□□ -1.63
BBS2-210	ENST00000565378	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
BBS2-210	ENST00000565378	CNOT8	Q9UFF9	292 aa	Known RBP	4.88	□□□□□ -1.63
BBS2-210	ENST00000565378	SCOC	Q9UIL1	159 aa		4.88	□□□□□ -1.63
BBS2-210	ENST00000565378	SUFU	Q9UMX1	484 aa		4.88	□□□□□ -1.63
BBS2-210	ENST00000565378	TRAF3IP3	Q9Y228	551 aa		4.88	□□□□□ -1.63
BBS2-210	ENST00000565378	FARSA	Q9Y285	508 aa	Known RBP	4.88	□□□□□ -1.63
BBS2-210	ENST00000565378	TMEM98	Q9Y2Y6	226 aa		4.88	□□□□□ -1.63
BBS2-210	ENST00000565378	LUC7L2	Q9Y383	392 aa	Known RBP	4.88	□□□□□ -1.63
BBS2-210	ENST00000565378	PCDHGA9	Q9Y5G4	932 aa	Known RBP	4.88	□□□□□ -1.63
BBS2-210	ENST00000565378	PCDHGA6	Q9Y5G7	932 aa		4.88	□□□□□ -1.63
BBS2-210	ENST00000565378	MED13L	Q71F56	2210 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	DRGX	A6NNA5	263 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	FAM171A2	A8MVW0	826 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	AKAP10	O43572	662 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	KLRC4	O43908	158 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	PRAMEF4	O60810	478 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	HSF2BP	O75031	334 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	SPAG6	O75602	509 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	ZMPSTE24	O75844	475 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	TOX4	O94842	621 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	TMEM63A	O94886	807 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	F9	P00740	461 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	SYT1	P21579	422 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	CTSS	P25774	331 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	HTR1E	P28566	365 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	PTPN4	P29074	926 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	KRT9	P35527	623 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	KIAA1024L	P59773	190 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	BPIFB4	P59827	614 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	HHEX	Q03014	270 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	CCDC40	Q4G0X9	1142 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	BRMS1L	Q5PSV4	323 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	CACHD1	Q5VU97	1274 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	RAET1G	Q6H3X3	334 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	C11orf57	Q6ZUT1	292 aa	Predicted RBP	4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	FAM183BP	Q6ZVS7	135 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	BEND5	Q7L4P6	421 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	CHST15	Q7LFX5	561 aa	Predicted RBP	4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	ARHGAP22	Q7Z5H3	698 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	SLC9B2	Q86UD5	537 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	PPP1R3B	Q86XI6	285 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	XYLT1	Q86Y38	959 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	NRROS	Q86YC3	692 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	PLXDC1	Q8IUK5	500 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	ZADH2	Q8N4Q0	377 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	ARFGAP1	Q8N6T3	406 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	RBMXL3	Q8N7X1	1067 aa	Known RBP	4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	BMPER	Q8N8U9	685 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	LINC00301	Q8NCQ3	95 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	ZNF606	Q8WXB4	792 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	ARHGEF2	Q92974	986 aa	Known RBP	4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	KAT5	Q92993	513 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	ISG20	Q96AZ6	181 aa	Known RBP	4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	SH3KBP1	Q96B97	665 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	NEIL1	Q96FI4	390 aa	Predicted RBP	4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	LMF1	Q96S06	567 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	RUFY1	Q96T51	708 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	ZSWIM1	Q9BR11	485 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	MLPH	Q9BV36	600 aa	Predicted RBP	4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	NUDT9	Q9BW91	350 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	SPRY4	Q9C004	299 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	TTYH3	Q9C0H2	523 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	SLC7A5P2	Q9GIP4	190 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	PDE7B	Q9NP56	450 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	UBE2T	Q9NPD8	197 aa	Predicted RBP	4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	LHX9	Q9NQ69	397 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	PIGV	Q9NUD9	493 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	GPR83	Q9NYM4	423 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	STAP1	Q9ULZ2	295 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	CELSR2	Q9HCU4	2923 aa		4.87	□□□□□ -1.63
BBS2-210	ENST00000565378	SETD2	Q9BYW2	2564 aa	Predicted RBP	4.86	□□□□□ -1.63
BBS2-210	ENST00000565378	ANKRD36	A6QL64	1941 aa		4.86	□□□□□ -1.63
BBS2-210	ENST00000565378		A0A1B0GUH1	482 aa		4.86	□□□□□ -1.63
BBS2-210	ENST00000565378	GOLGA8S	H3BPF8	625 aa		4.86	□□□□□ -1.63
BBS2-210	ENST00000565378	KDELR3	O43731	214 aa		4.86	□□□□□ -1.63
BBS2-210	ENST00000565378	RAMP2	O60895	175 aa		4.86	□□□□□ -1.63
BBS2-210	ENST00000565378	TMEM127	O75204	238 aa		4.86	□□□□□ -1.63
BBS2-210	ENST00000565378	TMCC1	O94876	653 aa		4.86	□□□□□ -1.63
BBS2-210	ENST00000565378	PLAT	P00750	562 aa		4.86	□□□□□ -1.63
BBS2-210	ENST00000565378	GAST	P01350	101 aa		4.86	□□□□□ -1.63
BBS2-210	ENST00000565378	IGLV3-25	P01717	112 aa		4.86	□□□□□ -1.63
BBS2-210	ENST00000565378	KLK3	P07288	261 aa	Predicted RBP	4.86	□□□□□ -1.63
BBS2-210	ENST00000565378	CD99	P14209	185 aa		4.86	□□□□□ -1.63
BBS2-210	ENST00000565378	GYPE	P15421	78 aa		4.86	□□□□□ -1.63
BBS2-210	ENST00000565378	ITGA3	P26006	1051 aa		4.86	□□□□□ -1.63
BBS2-210	ENST00000565378	RPS19	P39019	145 aa	Known RBP	4.86	□□□□□ -1.63
BBS2-210	ENST00000565378	GARS	P41250	739 aa	Known RBP	4.86	□□□□□ -1.63
BBS2-210	ENST00000565378	GPR1	P46091	355 aa		4.86	□□□□□ -1.63
BBS2-210	ENST00000565378	SUOX	P51687	545 aa		4.86	□□□□□ -1.63
BBS2-210	ENST00000565378	POLR2L	P62875	67 aa	Known RBP	4.86	□□□□□ -1.63
BBS2-210	ENST00000565378	BCL2L1	Q07817	233 aa		4.86	□□□□□ -1.63
BBS2-210	ENST00000565378	LLGL1	Q15334	1064 aa		4.86	□□□□□ -1.63
BBS2-210	ENST00000565378	C5orf22	Q49AR2	442 aa		4.86	□□□□□ -1.63
BBS2-210	ENST00000565378	CRYBG3	Q68DQ2	2970 aa		4.86	□□□□□ -1.63
BBS2-210	ENST00000565378	IRGC	Q6NXR0	463 aa		4.86	□□□□□ -1.63
BBS2-210	ENST00000565378	WDR74	Q6RFH5	385 aa	Predicted RBP	4.86	□□□□□ -1.63
BBS2-210	ENST00000565378	ZNF783	Q6ZMS7	281 aa		4.86	□□□□□ -1.63
BBS2-210	ENST00000565378	FAM92B	Q6ZTR7	304 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms