RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 FKBP14Q9NWM8 211 aa17.37■□□□□ 0.37
GDE1-203ENST00000564172 KLHL3Q9UH77 587 aa17.37■□□□□ 0.37
GDE1-203ENST00000564172 A0A1W2PQF6 199 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 NEMP2A6NFY4 417 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 PGM3O95394 542 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 TGDSO95455 350 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 HOXB2P14652 356 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 ITGB6P18564 788 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 ATP5F1P24539 256 aaPredicted RBP17.36■□□□□ 0.37
GDE1-203ENST00000564172 HMOX2P30519 316 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 ARRB2P32121 409 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 ATP6V0D1P61421 351 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 MRPS21P82921 87 aaKnown RBP17.36■□□□□ 0.37
GDE1-203ENST00000564172 ZNF776Q68DI1 518 aaPredicted RBP17.36■□□□□ 0.37
GDE1-203ENST00000564172 PTCRAQ6ISU1 281 aaPredicted RBP17.36■□□□□ 0.37
GDE1-203ENST00000564172 ATG14Q6ZNE5 492 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 CLNKQ7Z7G1 428 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 FAM20CQ8IXL6 584 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 CPNE9Q8IYJ1 553 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 HDDC3Q8N4P3 179 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 RHEBL1Q8TAI7 183 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 BTN2A2Q8WVV5 523 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 TRIM55Q9BYV6 548 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 SERGEFQ9UGK8 458 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 LZTS3O60299 673 aaPredicted RBP17.36■□□□□ 0.37
GDE1-203ENST00000564172 MTX2O75431 263 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 LYPLA1O75608 230 aaPredicted RBP17.36■□□□□ 0.37
GDE1-203ENST00000564172 PRKAA2P54646 552 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 TAS2R38P59533 333 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 OR4D1Q15615 310 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 C6orf163Q5TEZ5 329 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 PRPF38BQ5VTL8 546 aaKnown RBP17.36■□□□□ 0.37
GDE1-203ENST00000564172 NEK10Q6ZWH5 1172 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 TRMT11Q7Z4G4 463 aaKnown RBP17.36■□□□□ 0.37
GDE1-203ENST00000564172 MARVELD2Q8N4S9 558 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 CXorf40AQ8TE69 158 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 CHPT1Q8WUD6 406 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 BORCS5Q969J3 196 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 KIAA1191Q96A73 305 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 MOCOSQ96EN8 888 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 NSL1Q96IY1 281 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 VPS35Q96QK1 796 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 PALMDQ9NP74 551 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 NPHS2Q9NP85 383 aa17.36■□□□□ 0.37
GDE1-203ENST00000564172 MBD1Q9UIS9 605 aaPredicted RBP17.36■□□□□ 0.37
GDE1-203ENST00000564172 PLXNB3Q9ULL4 1909 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 A0A1W2PP55 124 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 H2AFYO75367 372 aaKnown RBP17.35■□□□□ 0.37
GDE1-203ENST00000564172 SRFP11831 508 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 ATP1B2P14415 290 aaPredicted RBP17.35■□□□□ 0.37
GDE1-203ENST00000564172 CDH2P19022 906 aaPredicted RBP17.35■□□□□ 0.37
GDE1-203ENST00000564172 COL9A1P20849 921 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 NAGLUP54802 743 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 ABCE1P61221 599 aaKnown RBP17.35■□□□□ 0.37
GDE1-203ENST00000564172 TDGQ13569 410 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 ZNF765Q7L2R6 523 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 TMPRSS6Q8IU80 811 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 CRLF3Q8IUI8 442 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 PELI3Q8N2H9 469 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 METTL25Q8N6Q8 603 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 GLYATL1Q969I3 302 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 NUS1Q96E22 293 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 LINGO1Q96FE5 620 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 SLC2A4RGQ9NR83 387 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 IKZF3Q9UKT9 509 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 PLXNA2O75051 1894 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 ESRRBO95718 433 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 CHRNB1P11230 501 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 CD72P21854 359 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 AKT1P31749 480 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 PCYT1AP49585 367 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 NR1H2P55055 460 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 C16orf72Q14CZ0 275 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 GPR153Q6NV75 609 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 DEFB123Q8N688 67 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 STAG3L4Q8TBR4 150 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 FAM3CQ92520 227 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 CCDC126Q96EE4 140 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 DCUN1D1Q96GG9 259 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 PDLIM5Q96HC4 596 aaKnown RBP17.35■□□□□ 0.37
GDE1-203ENST00000564172 ATOH8Q96SQ7 321 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 SORT1Q99523 831 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 FBRSQ9HAH7 460 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 LATS2Q9NRM7 1088 aa17.35■□□□□ 0.37
GDE1-203ENST00000564172 A8MT66 165 aa17.34■□□□□ 0.37
GDE1-203ENST00000564172 CDC7O00311 574 aa17.34■□□□□ 0.37
GDE1-203ENST00000564172 DENRO43583 198 aaKnown RBP17.34■□□□□ 0.37
GDE1-203ENST00000564172 TSPAN6O43657 245 aa17.34■□□□□ 0.37
GDE1-203ENST00000564172 IPO13O94829 963 aaKnown RBP17.34■□□□□ 0.37
GDE1-203ENST00000564172 SOD1P00441 154 aa17.34■□□□□ 0.37
GDE1-203ENST00000564172 OR56A5P0C7T3 313 aa17.34■□□□□ 0.37
GDE1-203ENST00000564172 DNAJB13P59910 316 aa17.34■□□□□ 0.37
GDE1-203ENST00000564172 CCINQ13939 588 aa17.34■□□□□ 0.37
GDE1-203ENST00000564172 TSNQ15631 228 aaKnown RBP17.34■□□□□ 0.37
GDE1-203ENST00000564172 KCTD21Q4G0X4 260 aa17.34■□□□□ 0.37
GDE1-203ENST00000564172 DET1Q7L5Y6 550 aa17.34■□□□□ 0.37
GDE1-203ENST00000564172 MSANTD3Q96H12 275 aa17.34■□□□□ 0.37
GDE1-203ENST00000564172 PANX3Q96QZ0 392 aa17.34■□□□□ 0.37
GDE1-203ENST00000564172 SLC6A17Q9H1V8 727 aa17.34■□□□□ 0.37
GDE1-203ENST00000564172 ZNF696Q9H7X3 374 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms